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Search of human proteins with 46361987
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46361987 hydroxyacylglutathione hydrolase-like isoform 1
[Homo sapiens]
(290 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46361987 hydroxyacylglutathione hydrolase-like isoform 1 [Hom... 607 e-174
gi|14150041 hydroxyacylglutathione hydrolase-like isoform 2 [Hom... 415 e-116
gi|94538320 hydroxyacylglutathione hydrolase isoform 2 [Homo sap... 229 2e-60
gi|94538322 hydroxyacylglutathione hydrolase isoform 1 [Homo sap... 229 2e-60
gi|21703352 myofibrillogenesis regulator 1 isoform 2 [Homo sapiens] 159 3e-39
gi|116642887 myofibrillogenesis regulator 1 isoform 1 [Homo sapi... 159 3e-39
gi|41327741 ETHE1 protein [Homo sapiens] 72 4e-13
gi|7705793 lactamase, beta 2 [Homo sapiens] 40 0.002
gi|110624792 5'-3' exoribonuclease 1 isoform a [Homo sapiens] 33 0.29
gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo ... 31 1.5
gi|239508911 PREDICTED: hypothetical protein [Homo sapiens] 31 1.5
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 31 1.5
gi|239754620 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo ... 30 2.5
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 29 4.2
gi|224282125 tRNA-yW synthesizing protein 1 homolog B isoform 2 ... 29 5.5
gi|224282123 tRNA-yW synthesizing protein 1 homolog B isoform 1 ... 29 5.5
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 28 9.4
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 28 9.4
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 28 9.4
gi|21281679 T-cell activation protein phosphatase 2C [Homo sapiens] 28 9.4
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 28 9.4
>gi|46361987 hydroxyacylglutathione hydrolase-like isoform 1 [Homo
sapiens]
Length = 290
Score = 607 bits (1564), Expect = e-174
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60
MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA
Sbjct: 1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60
Query: 61 RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW 120
RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW
Sbjct: 61 RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW 120
Query: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNLE 180
EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNLE
Sbjct: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNLE 180
Query: 181 FAQKVEPCNDHVRAKLSWAKARPLSRRGKRVGGEGTGFGVGGALRQGLMVTGACGHSRRG 240
FAQKVEPCNDHVRAKLSWAKARPLSRRGKRVGGEGTGFGVGGALRQGLMVTGACGHSRRG
Sbjct: 181 FAQKVEPCNDHVRAKLSWAKARPLSRRGKRVGGEGTGFGVGGALRQGLMVTGACGHSRRG 240
Query: 241 MRMTCPLCRRLWARSASTTPSCGWREYGCCPGASTVTWTLRKASGDCVLG 290
MRMTCPLCRRLWARSASTTPSCGWREYGCCPGASTVTWTLRKASGDCVLG
Sbjct: 241 MRMTCPLCRRLWARSASTTPSCGWREYGCCPGASTVTWTLRKASGDCVLG 290
>gi|14150041 hydroxyacylglutathione hydrolase-like isoform 2 [Homo
sapiens]
Length = 282
Score = 415 bits (1066), Expect = e-116
Identities = 201/202 (99%), Positives = 201/202 (99%)
Query: 1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60
MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA
Sbjct: 1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60
Query: 61 RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW 120
RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW
Sbjct: 61 RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW 120
Query: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNLE 180
EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNLE
Sbjct: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNLE 180
Query: 181 FAQKVEPCNDHVRAKLSWAKAR 202
FAQKVEPCNDHVRAKLSWAK R
Sbjct: 181 FAQKVEPCNDHVRAKLSWAKKR 202
>gi|94538320 hydroxyacylglutathione hydrolase isoform 2 [Homo
sapiens]
Length = 260
Score = 229 bits (584), Expect = 2e-60
Identities = 106/203 (52%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60
MKV+V+P L DNYMYLVI++ T+EA VD P+++++ + GV LT VLTTHHHWDHA
Sbjct: 1 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60
Query: 61 RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW 120
GN +L +L GL V G D+RI +LT ++ H L+ G+++V+CL TP HT+GH+ YF+
Sbjct: 61 GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 120
Query: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAE-LGTLPPETKVFCGHEHTLSNL 179
+ +PPA+F+GD L VAGCG EG+A +M ++L E LG LPP+T+V+CGHE+T++NL
Sbjct: 121 KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL 180
Query: 180 EFAQKVEPCNDHVRAKLSWAKAR 202
+FA+ VEP N +R KL+WAK +
Sbjct: 181 KFARHVEPGNAAIREKLAWAKEK 203
>gi|94538322 hydroxyacylglutathione hydrolase isoform 1 [Homo
sapiens]
Length = 308
Score = 229 bits (584), Expect = 2e-60
Identities = 106/203 (52%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60
MKV+V+P L DNYMYLVI++ T+EA VD P+++++ + GV LT VLTTHHHWDHA
Sbjct: 49 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 108
Query: 61 RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW 120
GN +L +L GL V G D+RI +LT ++ H L+ G+++V+CL TP HT+GH+ YF+
Sbjct: 109 GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 168
Query: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAE-LGTLPPETKVFCGHEHTLSNL 179
+ +PPA+F+GD L VAGCG EG+A +M ++L E LG LPP+T+V+CGHE+T++NL
Sbjct: 169 KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL 228
Query: 180 EFAQKVEPCNDHVRAKLSWAKAR 202
+FA+ VEP N +R KL+WAK +
Sbjct: 229 KFARHVEPGNAAIREKLAWAKEK 251
>gi|21703352 myofibrillogenesis regulator 1 isoform 2 [Homo sapiens]
Length = 361
Score = 159 bits (402), Expect = 3e-39
Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Query: 1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60
+KV IPVL DNY YL+I+ + AVAVD + P+ + + +EGV+L A+L TH HWDH+
Sbjct: 95 VKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDHS 154
Query: 61 RGNPELARLRPGLAVLGA-DERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFL 119
GN +L+R V G+ + I LT L H + + G + +R L TPGHT GH+ Y L
Sbjct: 155 GGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLL 214
Query: 120 WEDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNL 179
+ P LFSGD L ++GCG EG+A+ M SL + L +T ++ GHE+ NL
Sbjct: 215 DGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLGLGDDTLLWPGHEYAEENL 274
Query: 180 EFAQKVEPCNDHVRAKLSWAKARPLSRRG 208
FA VEP N K+ W + + L R+G
Sbjct: 275 GFAGVVEPENLARERKMQWVQRQRLERKG 303
>gi|116642887 myofibrillogenesis regulator 1 isoform 1 [Homo
sapiens]
Length = 385
Score = 159 bits (402), Expect = 3e-39
Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Query: 1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60
+KV IPVL DNY YL+I+ + AVAVD + P+ + + +EGV+L A+L TH HWDH+
Sbjct: 119 VKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDHS 178
Query: 61 RGNPELARLRPGLAVLGA-DERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFL 119
GN +L+R V G+ + I LT L H + + G + +R L TPGHT GH+ Y L
Sbjct: 179 GGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLL 238
Query: 120 WEDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNL 179
+ P LFSGD L ++GCG EG+A+ M SL + L +T ++ GHE+ NL
Sbjct: 239 DGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLGLGDDTLLWPGHEYAEENL 298
Query: 180 EFAQKVEPCNDHVRAKLSWAKARPLSRRG 208
FA VEP N K+ W + + L R+G
Sbjct: 299 GFAGVVEPENLARERKMQWVQRQRLERKG 327
>gi|41327741 ETHE1 protein [Homo sapiens]
Length = 254
Score = 72.4 bits (176), Expect = 4e-13
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 13 YMYLVIEELTREAVAVD--VAVPKRLLEIVGREGVSLTAVLTTHHHWDHARGNPELARLR 70
+ YL+ + +REAV +D + R +++ G+ L + TH H DH G+ L L
Sbjct: 36 FTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLL 95
Query: 71 PGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWEDDCPDPPAL 130
PG + + + G+ +RFG + +PGHT G +++ L D
Sbjct: 96 PGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVL-----NDHSMA 150
Query: 131 FSGDALSVAGCG--SCLEGSAQQMYQSLAE-LGTLPPETKVFCGHEH---TLSNLEFAQK 184
F+GDAL + GCG +G A+ +Y S+ E + TLP + ++ H++ T+S +E +
Sbjct: 151 FTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERT 210
Query: 185 VEP 187
+ P
Sbjct: 211 LNP 213
>gi|7705793 lactamase, beta 2 [Homo sapiens]
Length = 288
Score = 40.0 bits (92), Expect = 0.002
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 26/150 (17%)
Query: 46 SLTAVLTTHHHWDHARGNPE---------------LARLRPGLAVLGADERIFSLTRRLA 90
++ ++ TH H DH+ G + L R ++G E+ + L
Sbjct: 69 AIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIGNGEQQYVY---LK 125
Query: 91 HGEELRFGAIHVRCLLTPGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCGSCLEGSAQ 150
G+ ++ +R L TPGHT HM+ L E++ A+FSGD + G G+ +
Sbjct: 126 DGDVIKTEGATLRVLYTPGHTDDHMALLLEEEN-----AIFSGDC--ILGEGTTVFEDLY 178
Query: 151 QMYQSLAELGTLPPETKVFCGHEHTLSNLE 180
SL EL + + ++ GH + N E
Sbjct: 179 DYMNSLKELLKIKADI-IYPGHGPVIHNAE 207
>gi|110624792 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
Length = 1706
Score = 33.1 bits (74), Expect = 0.29
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Query: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETKVFCGHEHTLSNLE 180
E++ + ALF+ L G L Y S GT+PP G +H SN
Sbjct: 1490 ENEAKEKAALFALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTGWDHYGSNYA 1549
Query: 181 F-AQKVEPCNDHVRAKLSWAKARPL 204
A + P + H+ + W + P+
Sbjct: 1550 LGAANIMPSSSHLFGSMPWGPSVPV 1574
>gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo
sapiens]
Length = 140
Score = 30.8 bits (68), Expect = 1.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 205 SRRGKRVGGEGTGFGVGGALRQGLMVTGACGHSRRGMRMTCPLCRRLWARSASTTPS 261
S G ++GG G G+GG R+ L+ S + R+ C R W SA TPS
Sbjct: 73 STTGLKLGGSGKFEGMGGCGRRELVKKSEM--SMKSSRLGCSGVRSGWIMSALPTPS 127
>gi|239508911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 30.8 bits (68), Expect = 1.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 205 SRRGKRVGGEGTGFGVGGALRQGLMVTGACGHSRRGMRMTCPLCRRLWARSASTTPS 261
S G ++GG G G+GG R+ L+ S + R+ C R W SA TPS
Sbjct: 73 STTGLKLGGSGKFEGMGGCGRRELVKKSEM--SMKSSRLGCSGVRSGWIMSALPTPS 127
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 30.8 bits (68), Expect = 1.5
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 208 GKRVGGEGTGFGVGGALRQGL-MVTGACGHSRRGMRMTC--------PLCRRLWARSAST 258
G GG G+G G G+ R G G C S G C P+C + A S ++
Sbjct: 18 GSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACSCTS 77
Query: 259 TPSCGWREYGC--CPGASTVTWTLRKASGDC 287
SCG + GC C G+ + + G C
Sbjct: 78 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 108
>gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 551
Score = 30.0 bits (66), Expect = 2.5
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 205 SRRGKRVGGEGTGFGVGGALRQGLMVTGACGHSRRGMRMTCPLCRRLWARSASTTPSCGW 264
S G ++GG G G+GG R+ L+ S + R+ C R W SA T
Sbjct: 73 STTGLKLGGSGKFEGMGGCGRRELVKKSEM--SMKSSRLGCSGVRSGWIMSALPTRQLQG 130
Query: 265 REYGCCPGASTVTWTLRKA 283
R G G +V +KA
Sbjct: 131 RRAGLSHGEESVRDVGQKA 149
>gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo
sapiens]
Length = 399
Score = 30.0 bits (66), Expect = 2.5
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 205 SRRGKRVGGEGTGFGVGGALRQGLMVTGACGHSRRGMRMTCPLCRRLWARSASTTPSCGW 264
S G ++GG G G+GG R+ L+ S + R+ C R W SA T
Sbjct: 73 STTGLKLGGSGKFEGMGGCGRRELVKKSEM--SMKSSRLGCSGVRSGWIMSALPTRQLQG 130
Query: 265 REYGCCPGASTVTWTLRKA 283
R G G +V +KA
Sbjct: 131 RRAGLSHGEESVRDVGQKA 149
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 29.3 bits (64), Expect = 4.2
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 14/84 (16%)
Query: 214 EGTGFGVGGALRQGLMVTGACGHSRRGMRMTC--------PLCRRLWARSASTTPSCGWR 265
EG G G GG G CG G +C P+C + A S S+ SCG
Sbjct: 8 EGCGSGCGGCGSG----CGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCGGS 63
Query: 266 EYGC--CPGASTVTWTLRKASGDC 287
+ GC C G+ + + G C
Sbjct: 64 KGGCGSCGGSKGGCGSCGGSKGGC 87
>gi|224282125 tRNA-yW synthesizing protein 1 homolog B isoform 2
[Homo sapiens]
Length = 471
Score = 28.9 bits (63), Expect = 5.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 11/58 (18%)
Query: 129 ALFSGDALSVAGCGSCLEGSA-----------QQMYQSLAELGTLPPETKVFCGHEHT 175
+L + D + V G C E SA +++ Q + EL L PE ++ C HEH+
Sbjct: 367 SLGNPDFIEVKGVTYCRESSASSLTMAHVPWHEEVVQFVRELVDLIPEYEIACEHEHS 424
>gi|224282123 tRNA-yW synthesizing protein 1 homolog B isoform 1
[Homo sapiens]
Length = 668
Score = 28.9 bits (63), Expect = 5.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 11/58 (18%)
Query: 129 ALFSGDALSVAGCGSCLEGSA-----------QQMYQSLAELGTLPPETKVFCGHEHT 175
+L + D + V G C E SA +++ Q + EL L PE ++ C HEH+
Sbjct: 529 SLGNPDFIEVKGVTYCRESSASSLTMAHVPWHEEVVQFVRELVDLIPEYEIACEHEHS 586
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 108 PGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETK 167
PG A + D P P +F G AL V GCG + Q L PP +
Sbjct: 229 PGTAAASSPSADFSSDSPQPIIIFGG-ALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRR 287
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 108 PGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETK 167
PG A + D P P +F G AL V GCG + Q L PP +
Sbjct: 229 PGTAAASSPSADFSSDSPQPIIIFGG-ALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRR 287
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 108 PGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAELGTLPPETK 167
PG A + D P P +F G AL V GCG + Q L PP +
Sbjct: 229 PGTAAASSPSADFSSDSPQPIIIFGG-ALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRR 287
>gi|21281679 T-cell activation protein phosphatase 2C [Homo sapiens]
Length = 304
Score = 28.1 bits (61), Expect = 9.4
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 14/77 (18%)
Query: 204 LSRRGKRVGGEG--------TGFGVGGALRQGLMVTGACGHSRRGMRMTCPLCRRLWARS 255
LS+ R GG G G G G R+GL+ GAC C + R A
Sbjct: 19 LSQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGDD-----ACFVARHRSADV 73
Query: 256 ASTTPSC-GWREYGCCP 271
GWR+YG P
Sbjct: 74 LGVADGVGGWRDYGVDP 90
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 28.1 bits (61), Expect = 9.4
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 208 GKRVGGEGTGFGVGGALRQGLMVTGACGHSRRGMRMTC-PLCRRLWARSASTTPSCGWRE 266
G GG G+G G G G G CG C P+C + A S S SCG
Sbjct: 32 GSGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSCS---SCGKGG 88
Query: 267 YGCCPGASTVTWTLRKASGDC 287
G C G+ + + G C
Sbjct: 89 CGSCGGSKRGCVSCGVSKGAC 109
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,384,206
Number of Sequences: 37866
Number of extensions: 564197
Number of successful extensions: 1442
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1428
Number of HSP's gapped (non-prelim): 22
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.