Guide to the Human Genome
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Name: PPIL5 Sequence: fasta or formatted (146aa) NCBI GI: 45439346
Description:

peptidylprolyl isomerase (cyclophilin)-like 5 isoform 3

Referenced in:

Leucine-rich Repeat Family
Peptidylprolyl Isomerases

Other entries for this name:
alt prot [414aa] peptidylprolyl isomerase (cyclophilin)-like 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          5           1
 C cysteine            4.8          7           2
 D aspartate           2.7          4           1
 E glutamate           6.2          9           1
 F phenylalanine       4.8          7           2
 G glycine             4.8          7           1
 H histidine           4.1          6           1
 I isoleucine          4.8          7           1
 K lysine              6.8         10           1
 L leucine            13.0         19           2
 M methionine          0.7          1           1
 N asparagine          2.7          4           1
 P proline             5.5          8           2
 Q glutamine           2.7          4           2
 R arginine            9.6         14           1
 S serine              9.6         14           1
 T threonine           3.4          5           1
 V valine              5.5          8           1
 W tryptophan          1.4          2           1
 Y tyrosine            3.4          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peptidylprolyl isomerase (cyclophilin)-like 5 isofor... 
PPIL5                 0.584   peptidylprolyl isomerase (cyclophilin)-like 5 isofor...
CYB5R1                0.018   cytochrome b5 reductase 1 
ZNF592                0.018   zinc finger protein 592 
ZNF572                0.018   zinc finger protein 572 
STK39                 0.018   serine threonine kinase 39 (STE20/SPS1 homolog, yea...
DEPDC6                0.011   DEP domain containing 6 
MYST1                 0.011   MYST histone acetyltransferase 1 isoform 1 
ZNF169                0.011   zinc finger protein 169 
ZNF398                0.011   zinc finger 398 isoform b 
ZNF398                0.011   zinc finger 398 isoform a 
SPAG9                 0.011   sperm associated antigen 9 isoform 1 
SPAG9                 0.011   sperm associated antigen 9 isoform 3 
ZNF350                0.007   zinc finger protein 350 
MYST1                 0.007   MYST histone acetyltransferase 1 isoform 2 
LOC646817             0.007   PREDICTED: similar to SET translocation 
LOC646817             0.007   PREDICTED: similar to SET translocation 
LOC646817             0.007   PREDICTED: similar to SET translocation 
KIAA0368              0.007   KIAA0368 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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