SCN1B 29408

Name: SCN1B	Sequence: fasta or formatted (218aa)		NCBI GI: 4506805
Description: sodium channel, voltage-gated, type I, beta isoform a		Referenced in: Sodium Channels
Other entries for this name: alt prot [268aa] sodium channel, voltage-gated, type I, beta isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 17 3 C cysteine 3.2 7 1 D aspartate 3.2 7 1 E glutamate 11.9 26 2 F phenylalanine 3.7 8 2 G glycine 5.0 11 2 H histidine 1.8 4 1 I isoleucine 6.4 14 1 K lysine 5.0 11 2 L leucine 7.3 16 2 M methionine 2.8 6 2 N asparagine 4.6 10 1 P proline 0.0 0 0 Q glutamine 2.3 5 1 R arginine 4.6 10 2 S serine 6.4 14 2 T threonine 7.3 16 1 V valine 10.6 23 2 W tryptophan 1.4 3 1 Y tyrosine 4.6 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type I, beta isoform a... SCN1B 0.684 sodium channel, voltage-gated, type I, beta isoform ... SCN3B 0.382 voltage-gated sodium channel beta-3 subunit precursor... SCN3B 0.382 voltage-gated sodium channel beta-3 subunit precurso... MPZL1 0.054 myelin protein zero-like 1 isoform b MPZL1 0.054 myelin protein zero-like 1 isoform a MPZ 0.054 myelin protein zero MPZL2 0.032 myelin protein zero-like 2 precursor MPZL2 0.032 myelin protein zero-like 2 precursor MPZL3 0.029 myelin protein zero-like 3 SCN2B 0.027 sodium channel, voltage-gated, type II, beta ZNF658 0.019 zinc finger protein 658 IGSF11 0.019 immunoglobulin superfamily, member 11 isoform b [Hom... IGSF11 0.019 immunoglobulin superfamily, member 11 isoform a [Hom... FCGR2B 0.017 Fc fragment of IgG, low affinity IIb, receptor isofo... FCGR2B 0.017 Fc fragment of IgG, low affinity IIb, receptor isofo... SCN4B 0.017 sodium channel, voltage-gated, type IV, beta isoform... FCGR2C 0.017 Fc fragment of IgG, low affinity IIc, receptor [Hom... L1TD1 0.017 LINE-1 type transposase domain containing 1 CD160 0.017 CD160 antigen LRRC24 0.015 leucine rich repeat containing 24 FCGR2A 0.015 Fc fragment of IgG, low affinity IIa, receptor isof... FCGR2A 0.015 Fc fragment of IgG, low affinity IIa, receptor isofo... CEACAM1 0.012 carcinoembryonic antigen-related cell adhesion molec... CEACAM1 0.012 carcinoembryonic antigen-related cell adhesion molec... ZNF782 0.012 zinc finger protein 782 FCGR2B 0.012 Fc fragment of IgG, low affinity IIb, receptor isofo... FCGR2B 0.012 Fc fragment of IgG, low affinity IIb, receptor isofo... IGSF1 0.012 immunoglobulin superfamily, member 1 isoform 1 [Homo... CEACAM5 0.012 carcinoembryonic antigen-related cell adhesion molec... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.