Guide to the Human Genome
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Name: ELN Sequence: fasta or formatted (711aa) NCBI GI: 126352446
Description:

elastin isoform d precursor

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [692aa] elastin isoform c precursor
alt prot [724aa] elastin isoform a precursor
alt prot [705aa] elastin isoform e precursor
alt prot [677aa] elastin isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            22.4        159          10
 C cysteine            0.3          2           1
 D aspartate           0.1          1           1
 E glutamate           0.3          2           1
 F phenylalanine       2.1         15           1
 G glycine            28.6        203           3
 H histidine           0.1          1           1
 I isoleucine          2.4         17           1
 K lysine              4.9         35           1
 L leucine             6.2         44           5
 M methionine          0.1          1           1
 N asparagine          0.0          0           0
 P proline            12.8         91           2
 Q glutamine           1.0          7           1
 R arginine            1.1          8           1
 S serine              1.1          8           1
 T threonine           1.4         10           2
 V valine             12.9         92           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elastin isoform d precursor 
ELN                   0.981   elastin isoform a precursor 
ELN                   0.968   elastin isoform c precursor 
ELN                   0.948   elastin isoform e precursor 
ELN                   0.935   elastin isoform b precursor 
COL1A1                0.111   alpha 1 type I collagen preproprotein 
COL3A1                0.108   collagen type III alpha 1 preproprotein 
COL4A1                0.108   alpha 1 type IV collagen preproprotein 
COL4A5                0.103   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.103   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.103   type IV collagen alpha 5 isoform 3 precursor 
COL4A6                0.102   type IV alpha 6 collagen isoform A precursor 
COL4A6                0.102   type IV alpha 6 collagen isoform B precursor 
COL1A2                0.101   alpha 2 type I collagen 
COL2A1                0.098   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.098   collagen, type II, alpha 1 isoform 2 precursor [Hom...
COL4A2                0.097   alpha 2 type IV collagen preproprotein 
COL5A2                0.092   alpha 2 type V collagen preproprotein 
COL22A1               0.090   collagen, type XXII, alpha 1 
COL8A1                0.086   alpha 1 type VIII collagen precursor 
COL8A1                0.086   alpha 1 type VIII collagen precursor 
COL7A1                0.085   alpha 1 type VII collagen precursor 
COL24A1               0.085   collagen, type XXIV, alpha 1 
COL11A1               0.083   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.083   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.083   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL10A1               0.083   type X collagen alpha 1 precursor 
COL8A2                0.082   collagen, type VIII, alpha 2 
COL16A1               0.082   alpha 1 type XVI collagen precursor 
COL4A4                0.082   alpha 4 type IV collagen precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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