Guide to the Human Genome
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Name: C14orf102 Sequence: fasta or formatted (1164aa) NCBI GI: 39932583
Description:

hypothetical protein LOC55051 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {933aa} hypothetical protein LOC55051 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         78           3
 C cysteine            1.9         22           1
 D aspartate           5.2         61           3
 E glutamate           8.4         98           2
 F phenylalanine       4.5         52           2
 G glycine             5.2         61           2
 H histidine           2.4         28           2
 I isoleucine          3.6         42           1
 K lysine              8.4         98           4
 L leucine            10.8        126           3
 M methionine          1.6         19           1
 N asparagine          3.0         35           2
 P proline             5.2         61           2
 Q glutamine           5.0         58           2
 R arginine            5.4         63           2
 S serine              8.8        103           4
 T threonine           4.6         54           2
 V valine              4.4         51           2
 W tryptophan          2.4         28           1
 Y tyrosine            2.2         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC55051 isoform 1 
C14orf102             0.800   hypothetical protein LOC55051 isoform 2 
NKAPL                 0.012   NFKB activating protein-like 
RBBP6                 0.010   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.010   retinoblastoma-binding protein 6 isoform 1 
GPATCH1               0.010   G patch domain containing 1 
SFRS12                0.009   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.009   splicing factor, arginine/serine-rich 12 isoform b [...
AP3B2                 0.009   adaptor-related protein complex 3, beta 2 subunit [H...
NKAP                  0.009   NFKB activating protein 
SFRS12IP1             0.009   P18SRP protein 
RP9                   0.009   retinitis pigmentosa 9 
CIR1                  0.009   CBF1 interacting corepressor 
LOC100294364          0.009   PREDICTED: hypothetical protein 
AP3D1                 0.008   adaptor-related protein complex 3, delta 1 subunit ...
PPIG                  0.008   peptidylprolyl isomerase G 
PRPF40A               0.008   formin binding protein 3 
CROP                  0.008   cisplatin resistance-associated overexpressed protei...
CROP                  0.008   cisplatin resistance-associated overexpressed protei...
LOC100133698          0.008   PREDICTED: hypothetical protein 
C1orf35               0.008   hypothetical protein LOC79169 
EIF5B                 0.007   eukaryotic translation initiation factor 5B 
LOC100294088          0.007   PREDICTED: hypothetical protein, partial 
GTF2F1                0.007   general transcription factor IIF, polypeptide 1, 74...
NKTR                  0.007   natural killer-tumor recognition sequence 
CTR9                  0.007   SH2 domain binding protein 1 
ZCCHC17               0.007   zinc finger, CCHC domain containing 17 
CYLC1                 0.007   cylicin, basic protein of sperm head cytoskeleton 1...
ZC3H4                 0.007   zinc finger CCCH-type containing 4 
RBMX2                 0.007   RNA binding motif protein, X-linked 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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