Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HSD11B1L Sequence: fasta or formatted (181aa) NCBI GI: 38424081
Description:

short-chain dehydrogenase/reductase 10 isoform f

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt prot [315aa] short-chain dehydrogenase/reductase 10 isoform e
alt prot [205aa] short-chain dehydrogenase/reductase 10 isoform a
alt prot [199aa] short-chain dehydrogenase/reductase 10 isoform c
alt prot [152aa] short-chain dehydrogenase/reductase 10 isoform d
alt prot [286aa] short-chain dehydrogenase/reductase 10 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         13           2
 C cysteine            1.1          2           1
 D aspartate           3.9          7           1
 E glutamate           3.9          7           1
 F phenylalanine       3.9          7           2
 G glycine             6.1         11           1
 H histidine           2.2          4           1
 I isoleucine          0.6          1           1
 K lysine              3.9          7           1
 L leucine            10.5         19           2
 M methionine          2.2          4           1
 N asparagine          1.7          3           1
 P proline             8.3         15           2
 Q glutamine           5.0          9           1
 R arginine            9.9         18           2
 S serine             10.5         19           2
 T threonine           7.2         13           1
 V valine              9.9         18           3
 W tryptophan          1.1          2           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   short-chain dehydrogenase/reductase 10 isoform f [Ho... 
HSD11B1L              1.000   short-chain dehydrogenase/reductase 10 isoform e [Ho...
HSD11B1L              0.433   short-chain dehydrogenase/reductase 10 isoform d [Ho...
HSD11B1L              0.433   short-chain dehydrogenase/reductase 10 isoform a [Ho...
HSD11B1L              0.433   short-chain dehydrogenase/reductase 10 isoform c [Ho...
HSD11B1L              0.433   short-chain dehydrogenase/reductase 10 isoform b [Ho...
HSD11B1               0.223   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.223   11-beta-hydroxysteroid dehydrogenase 1 
DHRS7                 0.071   dehydrogenase/reductase (SDR family) member 7 
DHRS7B                0.071   dehydrogenase/reductase (SDR family) member 7B [Homo...
BDH1                  0.062   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.062   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.062   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
RDH16                 0.062   retinol dehydrogenase 16 
DHRS7C                0.062   dehydrogenase/reductase (SDR family) member 7C [Hom...
HSD17B6               0.062   hydroxysteroid (17-beta) dehydrogenase 6 
RDH8                  0.062   retinol dehydrogenase 8 (all-trans) 
HSD17B2               0.059   hydroxysteroid (17-beta) dehydrogenase 2 
HSD17B11              0.050   estradiol 17-beta-dehydrogenase 11 
SDR9C7                0.047   short chain dehydrogenase/reductase family 9C, membe...
DHRS9                 0.045   NADP-dependent retinol dehydrogenase/reductase [Homo...
DHRS9                 0.045   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.045   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.045   NADP-dependent retinol dehydrogenase/reductase [Homo...
RDH5                  0.045   retinol dehydrogenase 5 (11-cis and 9-cis) 
HSD17B13              0.045   hydroxysteroid (17-beta) dehydrogenase 13 isoform B...
HSD17B13              0.045   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
HSD17B12              0.042   hydroxysteroid (17-beta) dehydrogenase 12 
HSD17B14              0.039   dehydrogenase/reductase (SDR family) member 10 [Homo...
RDH10                 0.039   retinol dehydrogenase 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press