Guide to the Human Genome
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Name: HIPK1 Sequence: fasta or formatted (816aa) NCBI GI: 38201644
Description:

homeodomain-interacting protein kinase 1 isoform 4

Referenced in:

Dual-Specificity Protein Kinases
Homeobox and Related Proteins

Other entries for this name:
alt prot [1075aa] homeodomain-interacting protein kinase 1 isoform 2
alt prot [1210aa] homeodomain-interacting protein kinase 1 isoform 1
alt prot [836aa] homeodomain-interacting protein kinase 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         74           4
 C cysteine            1.2         10           2
 D aspartate           3.3         27           2
 E glutamate           2.1         17           3
 F phenylalanine       2.2         18           2
 G glycine             5.3         43           2
 H histidine           3.3         27           1
 I isoleucine          3.7         30           3
 K lysine              3.1         25           2
 L leucine             8.9         73           2
 M methionine          1.8         15           1
 N asparagine          3.7         30           1
 P proline             8.6         70           2
 Q glutamine           8.3         68           3
 R arginine            3.3         27           2
 S serine             12.5        102           3
 T threonine           9.3         76           2
 V valine              6.6         54           2
 W tryptophan          0.5          4           1
 Y tyrosine            3.2         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   homeodomain-interacting protein kinase 1 isoform 4 [... 
HIPK1                 0.994   homeodomain-interacting protein kinase 1 isoform 3 [...
HIPK1                 0.994   homeodomain-interacting protein kinase 1 isoform 1 [...
HIPK1                 0.792   homeodomain-interacting protein kinase 1 isoform 2 [...
HIPK2                 0.526   homeodomain interacting protein kinase 2 isoform 1 ...
HIPK2                 0.501   homeodomain interacting protein kinase 2 isoform 2 ...
HIPK3                 0.269   homeodomain interacting protein kinase 3 isoform 2 ...
HIPK3                 0.264   homeodomain interacting protein kinase 3 isoform 1 ...
HIPK4                 0.040   homeodomain interacting protein kinase 4 
MUC12                 0.022   PREDICTED: mucin 12 
MUC12                 0.019   PREDICTED: mucin 12 
MUC17                 0.018   mucin 17 
MUC3A                 0.017   PREDICTED: mucin 3A, cell surface associated, parti...
MUC3A                 0.017   PREDICTED: mucin 3A, intestinal 
SRCAP                 0.016   Snf2-related CBP activator protein 
MUC12                 0.015   PREDICTED: mucin 12, cell surface associated 
ANKRD17               0.015   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.015   ankyrin repeat domain protein 17 isoform b 
CRTC2                 0.015   CREB regulated transcription coactivator 2 
MUC12                 0.014   PREDICTED: mucin 12 
MUC5B                 0.014   mucin 5, subtype B, tracheobronchial 
MUC5AC                0.014   mucin 5AC 
LOC100133714          0.013   PREDICTED: similar to Mucin-12, partial 
MUC6                  0.013   mucin 6, gastric 
MAPK14                0.013   mitogen-activated protein kinase 14 isoform 2 
MUC3B                 0.012   PREDICTED: mucin 3B, cell surface associated, parti...
MAPK14                0.012   mitogen-activated protein kinase 14 isoform 1 
LOC100130716          0.011   PREDICTED: similar to mucin 11 
AAK1                  0.011   AP2 associated kinase 1 
WNK1                  0.010   WNK lysine deficient protein kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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