SMYD1 26768

Name: SMYD1	Sequence: fasta or formatted (490aa)		NCBI GI: 38093643
Description: SET and MYND domain containing 1		Referenced in: Histones, Related Proteins, and Modifying Enzymes Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 31 2 C cysteine 3.5 17 1 D aspartate 4.3 21 2 E glutamate 8.6 42 3 F phenylalanine 5.1 25 1 G glycine 5.7 28 1 H histidine 3.7 18 1 I isoleucine 4.5 22 2 K lysine 6.7 33 2 L leucine 8.0 39 2 M methionine 4.3 21 1 N asparagine 5.3 26 2 P proline 3.1 15 2 Q glutamine 5.3 26 2 R arginine 5.5 27 2 S serine 4.5 22 1 T threonine 3.9 19 1 V valine 7.1 35 2 W tryptophan 1.2 6 1 Y tyrosine 3.5 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SET and MYND domain containing 1 SMYD2 0.208 SET and MYND domain containing 2 SMYD3 0.183 SET and MYND domain containing 3 SMYD4 0.027 SET and MYND domain containing 4 ANKMY2 0.021 ankyrin repeat and MYND domain containing 2 SMYD5 0.019 SMYD family member 5 USP19 0.017 ubiquitin thioesterase 19 ZMYND19 0.015 zinc finger, MYND domain containing 19 SUV420H2 0.012 suppressor of variegation 4-20 homolog 2 TDRD1 0.011 tudor domain containing 1 EGLN1 0.010 egl nine homolog 1 ZMYND17 0.009 zinc finger, MYND domain containing 17 WHSC1 0.007 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.007 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.007 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.007 Wolf-Hirschhorn syndrome candidate 1 protein isofor... ZMYND15 0.007 zinc finger, MYND-type containing 15 isoform 1 [Hom... ZMYND15 0.007 zinc finger, MYND-type containing 15 isoform 2 [Homo... DEAF1 0.007 deformed epidermal autoregulatory factor 1 LOC100294411 0.007 PREDICTED: similar to deformed epidermal autoregula... TH1L 0.007 TH1-like protein BRSK2 0.007 BR serine/threonine kinase 2 MLL 0.006 myeloid/lymphoid or mixed-lineage leukemia protein [... ZMYND10 0.006 zinc finger, MYND domain-containing 10 LOC389813 0.006 similar to CG15216-PA GRIA3 0.005 glutamate receptor, ionotrophic, AMPA 3 isoform 2 p... GRIA3 0.005 glutamate receptor, ionotrophic, AMPA 3 isoform 1 p... WHSC1L1 0.005 WHSC1L1 protein isoform long KLC1 0.005 kinesin light chain 1 isoform 3 KLC1 0.005 kinesin light chain 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.