Guide to the Human Genome
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Name: C20orf26 Sequence: fasta or formatted (1237aa) NCBI GI: 34222104
Description:

hypothetical protein LOC26074

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         75           3
 C cysteine            2.6         32           2
 D aspartate           5.1         63           2
 E glutamate           7.1         88           3
 F phenylalanine       5.2         64           2
 G glycine             4.0         49           2
 H histidine           4.0         49           2
 I isoleucine          6.5         81           2
 K lysine              4.5         56           2
 L leucine            10.3        127           2
 M methionine          2.0         25           1
 N asparagine          4.9         61           2
 P proline             5.1         63           3
 Q glutamine           3.4         42           2
 R arginine            4.9         60           2
 S serine              6.9         85           3
 T threonine           5.7         70           2
 V valine              6.6         82           3
 W tryptophan          0.6          8           1
 Y tyrosine            4.6         57           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC26074 
SHROOM4               0.004   shroom family member 4 
GRIPAP1               0.004   GRIP1 associated protein 1 isoform 2 
GRIPAP1               0.004   GRIP1 associated protein 1 isoform 1 
KIAA1109              0.003   fragile site-associated protein 
TRPC4                 0.003   transient receptor potential cation channel, subfam...
TRPC4                 0.003   transient receptor potential cation channel, subfam...
TRPC4                 0.003   transient receptor potential cation channel, subfam...
TRPC4                 0.003   transient receptor potential cation channel, subfam...
TRPC4                 0.003   transient receptor potential cation channel, subfamil...
RWDD3                 0.003   RWD domain containing 3 isoform b 
RWDD3                 0.003   RWD domain containing 3 isoform a 
DNM1L                 0.003   dynamin 1-like isoform 1 
DNM1L                 0.003   dynamin 1-like isoform 3 
DNM1L                 0.003   dynamin 1-like isoform 2 
AIFM2                 0.003   apoptosis-inducing factor (AIF)-like mitchondrion-as...
DDX18                 0.003   DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 
XRRA1                 0.003   X-ray radiation resistance associated 1 
ATXN3L                0.002   ataxin 3-like 
FAM171A1              0.002   hypothetical protein LOC221061 
PRMT10                0.002   protein arginine methyltransferase 10 (putative) [Ho...
GAS7                  0.002   growth arrest-specific 7 isoform d 
GAS7                  0.002   growth arrest-specific 7 isoform c 
GAS7                  0.002   growth arrest-specific 7 isoform b 
GAS7                  0.002   growth arrest-specific 7 isoform a 
ATRIP                 0.002   ATR interacting protein isoform 1 
NFKBIL2               0.002   NF-kappa-B inhibitor-like protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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