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Search of human proteins with 33286446
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33286446 opioid growth factor receptor [Homo sapiens]
(677 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33286446 opioid growth factor receptor [Homo sapiens] 1413 0.0
gi|55770902 opioid growth factor receptor-like 1 [Homo sapiens] 273 4e-73
gi|150170670 piccolo isoform 2 [Homo sapiens] 91 3e-18
gi|150378539 piccolo isoform 1 [Homo sapiens] 91 3e-18
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 89 1e-17
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 88 2e-17
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 85 3e-16
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 82 1e-15
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 82 1e-15
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 82 1e-15
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 81 4e-15
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 80 8e-15
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 80 8e-15
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 80 8e-15
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 80 8e-15
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 79 2e-14
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 79 2e-14
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 77 4e-14
gi|110832843 TBP-associated factor 4 [Homo sapiens] 77 7e-14
gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens] 77 7e-14
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 76 9e-14
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 75 2e-13
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 75 3e-13
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 74 3e-13
gi|48762934 alpha 2 type I collagen [Homo sapiens] 74 4e-13
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 74 4e-13
gi|163965366 nascent polypeptide-associated complex alpha subuni... 73 8e-13
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 72 2e-12
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 71 3e-12
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 71 3e-12
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 1413 bits (3658), Expect = 0.0
Identities = 677/677 (100%), Positives = 677/677 (100%)
Query: 1 MDDPDCDSTWEEDEEDAEDAEDEDCEDGEAAGARDADAGDEDEESEEPRAARPSSFQSRM 60
MDDPDCDSTWEEDEEDAEDAEDEDCEDGEAAGARDADAGDEDEESEEPRAARPSSFQSRM
Sbjct: 1 MDDPDCDSTWEEDEEDAEDAEDEDCEDGEAAGARDADAGDEDEESEEPRAARPSSFQSRM 60
Query: 61 TGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWTDN 120
TGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWTDN
Sbjct: 61 TGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWTDN 120
Query: 121 YDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRAYELMLGFYGI 180
YDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRAYELMLGFYGI
Sbjct: 121 YDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRAYELMLGFYGI 180
Query: 181 RLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEET 240
RLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEET
Sbjct: 181 RLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEET 240
Query: 241 LVRRELPGVRQSALDYFMFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQDKLRRFKPSSL 300
LVRRELPGVRQSALDYFMFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQDKLRRFKPSSL
Sbjct: 241 LVRRELPGVRQSALDYFMFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQDKLRRFKPSSL 300
Query: 301 PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLER 360
PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLER
Sbjct: 301 PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLER 360
Query: 361 SQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALS 420
SQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALS
Sbjct: 361 SQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALS 420
Query: 421 QGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA 480
QGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA
Sbjct: 421 QGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA 480
Query: 481 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE 540
LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE
Sbjct: 481 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE 540
Query: 541 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSE 600
TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSE
Sbjct: 541 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSE 600
Query: 601 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEA 660
TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEA
Sbjct: 601 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEA 660
Query: 661 AELQDAEVESSAKSGKP 677
AELQDAEVESSAKSGKP
Sbjct: 661 AELQDAEVESSAKSGKP 677
>gi|55770902 opioid growth factor receptor-like 1 [Homo sapiens]
Length = 451
Score = 273 bits (698), Expect = 4e-73
Identities = 161/424 (37%), Positives = 233/424 (54%), Gaps = 43/424 (10%)
Query: 5 DCDSTWEEDEEDAEDA-------------EDEDCEDGEAAGARDADAGDEDEESEEPRAA 51
DCDSTW+ D E + ++ + E AG R + DE++E A
Sbjct: 18 DCDSTWQTDSEPEPEEPGPGGGSEGPGQESEQPAQPPEQAGGRPGASPAPDEDAEAAGAE 77
Query: 52 RPS-SFQSRMTGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFYRNEIRFLPNGCFI 110
+ S ++ R++ A RD+ +YRH YP+ + D NL FY+N+I F P+G +I
Sbjct: 78 QGGDSTEATAKPKRSFYAARDLYKYRHQYPNFKDIRYQNDLSNLRFYKNKIPFKPDGVYI 137
Query: 111 EDILQNWTDNYDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRA 170
E++L W +Y+ LE NH+YIQWLFPLRE G+N++AK LT E+E FK ++E R + A
Sbjct: 138 EEVLSKWKGDYEKLEHNHTYIQWLFPLREQGLNFYAKELTTYEIEEFKKTKEAIRRFLLA 197
Query: 171 YELMLGFYGIRLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQA 230
Y++ML F+GI+L D+ TG V RA N+Q+RFQ+LN HN LRITRILKSLGELG E F++
Sbjct: 198 YKMMLEFFGIKLTDK-TGNVARAVNWQERFQHLNESQHNYLRITRILKSLGELGYESFKS 256
Query: 231 PLVRFFLEETLVRRELPGVRQSALDYFMFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQD 290
PLV+F L E LV +P ++QSAL+YF++ +R R +RR+L+ FA +H+ P F+WGP
Sbjct: 257 PLVKFILHEALVENTIPNIKQSALEYFVYTIRDRRERRKLLRFAQKHYTPSENFIWGPPR 316
Query: 291 KLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRV---DEGPQP 347
K EGS K ++ SP H + T + V + +
Sbjct: 317 K----------EQSEGS-KAQKMSSPLASSHNSQTSMHKKAKDSKNSSSAVHLNSKTAED 365
Query: 348 RSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKE-SKKRKLEL-SRREQPPTEPGPQSAS 405
+ V P++ P+E + DRP P E +K R E S E ++P +
Sbjct: 366 KKVAPKE--PVEET----------DRPSPEPSNEAAKPRNTEKDSNAENMNSQPEKTVTT 413
Query: 406 EVEK 409
EK
Sbjct: 414 PTEK 417
Score = 37.4 bits (85), Expect = 0.046
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 504 TEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 563
T+ P+E PG SE PG ++PA+ P + G A PA DE AE+ G
Sbjct: 25 TDSEPEPEEPGPGGGSEGPGQE-----SEQPAQPPEQAGGRPGASPAPDEDAEAAGAEQG 79
Score = 36.2 bits (82), Expect = 0.10
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 583 GPSPAGPTRDEPAESPSET---PGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPS 639
G S PT E +S +T P P GP G SE PG ++PA+ P
Sbjct: 7 GVSFREPTTVEDCDSTWQTDSEPEPEEPGPGGG------SEGPGQE-----SEQPAQPPE 55
Query: 640 ETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAK 673
+ G A P DE A+A A + D+ E++AK
Sbjct: 56 QAGGRPGASPAPDEDAEAAGAEQGGDS-TEATAK 88
Score = 32.3 bits (72), Expect = 1.5
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 552 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAG 611
D ++ SE P P GP G SE PG ++PA+ P + G A PA
Sbjct: 20 DSTWQTDSE-PEPEEPGPGGG------SEGPGQES-----EQPAQPPEQAGGRPGASPAP 67
Query: 612 DEPAESPSETPG 623
DE AE+ G
Sbjct: 68 DEDAEAAGAEQG 79
Score = 32.3 bits (72), Expect = 1.5
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 11/62 (17%)
Query: 522 PGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSET 581
P P GP G SE PG ++PA+ P + G A PA DE AE+
Sbjct: 29 PEPEEPGPGGG------SEGPGQE-----SEQPAQPPEQAGGRPGASPAPDEDAEAAGAE 77
Query: 582 PG 583
G
Sbjct: 78 QG 79
Score = 32.0 bits (71), Expect = 1.9
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 14/84 (16%)
Query: 523 GPSPAGPAGDEPAESPSET---PGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPS 579
G S P E +S +T P P GP G SE PG ++PA+ P
Sbjct: 7 GVSFREPTTVEDCDSTWQTDSEPEPEEPGPGGG------SEGPGQE-----SEQPAQPPE 55
Query: 580 ETPGPSPAGPTRDEPAESPSETPG 603
+ G A P DE AE+ G
Sbjct: 56 QAGGRPGASPAPDEDAEAAGAEQG 79
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 91.3 bits (225), Expect = 3e-18
Identities = 91/390 (23%), Positives = 151/390 (38%), Gaps = 36/390 (9%)
Query: 320 DHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGED-RPEPLS 378
D EAS + T + + EG ++ Q P+ + QG +D P+ +S
Sbjct: 181 DSEASQEETTKKQKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSIS 240
Query: 379 PKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCA--LSQGSLRTGTQEVGGQDP 436
++ +K K + +P P ++ K+ L + Q + G + V P
Sbjct: 241 SQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRG-ESVKPSLP 299
Query: 437 GEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALA-----------GSP 485
+ P +QP + + K G A SG + LA G+
Sbjct: 300 SPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTT 359
Query: 486 APSGHP----KAGHSENGVEEDTEGRTGPKE-----GTPGSPSETPGPSPAG-------- 528
P P K + G E+ + + GPK G +P++ PGP+
Sbjct: 360 KPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
Query: 529 PAGDEPA-ESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPA 587
P +P +SP++ PGP P + P++ GP P + PS+ PGP+
Sbjct: 420 PLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKP 479
Query: 588 GPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPA 647
P + PA+ P + PG A P +P + P PA P+ +P + + P A
Sbjct: 480 PPQQPGPAKPPPQQPG--SAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSA 537
Query: 648 GPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
P+ +P+ A +A+ Q + S SGKP
Sbjct: 538 KPSAQQPSPAKPSAQ-QSTKPVSQTGSGKP 566
Score = 77.8 bits (190), Expect = 3e-14
Identities = 84/370 (22%), Positives = 142/370 (38%), Gaps = 36/370 (9%)
Query: 306 GSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERS---- 361
G ++++G+P + + ++ P G G+ +GP PL+R
Sbjct: 226 GRDPLQQDGTPKSISSQQPEKIKSQPP----GTGKPIQGPTQTPQTDHAKLPLQRDASRP 281
Query: 362 QGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPG-----PQSASEVEKIALNLEG 416
Q +A + +P P SK + + + P +PG P A + + +
Sbjct: 282 QTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKP 341
Query: 417 CALSQGSLRTGTQEVGG-QDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGG 475
A G+++ Q G + P + + P + P ++K + + V
Sbjct: 342 LAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTP 401
Query: 476 AQTLALAGSPAPS-GHPKAGHSENGVEEDTEG----RTGPKEGTPGS-PSETPGPSPAGP 529
AQ A P G PK + G++ + +T ++ PG P++ GP
Sbjct: 402 AQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA 461
Query: 530 AGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAES--PSETPGPSPA 587
P + PS+ PGP P PA+ P + PG A P +P + P + PGP+
Sbjct: 462 QQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPG--SAKPPSQQPGSTKPPPQQPGPAKP 519
Query: 588 GPTRDEPAESPSETPG--------PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPS 639
P + + PS+ PG P PA P+ + + S+T +P P P SPS
Sbjct: 520 SPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQP----PTVSPS 575
Query: 640 ETPGPSPAGP 649
PS P
Sbjct: 576 AKQPPSQGLP 585
Score = 45.1 bits (105), Expect = 2e-04
Identities = 84/356 (23%), Positives = 123/356 (34%), Gaps = 59/356 (16%)
Query: 345 PQPRSVEPQ-DAGPLERSQGDEAGGHGEDRPEPL--------SPKESKKRKLELSR--RE 393
PQP+ P+ DA P + D + +P PL SP K+ E +
Sbjct: 677 PQPQQTSPKKDAAPKQ----DLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKP 732
Query: 394 QPPTEPGPQSASEVEKIA---------LNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCR 444
PP EP S + +A + +S S T + +A +
Sbjct: 733 APPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTT 792
Query: 445 QPLGARVADKVRKRRKVDEGAG--DSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEE 502
PL A + E DS A+ + + ++ P PS K + V++
Sbjct: 793 PPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIIS-HPGPSSESKGQKQVDPVQK 851
Query: 503 DTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRP-AGPAGDEPAESPSET 561
E + K T SP P P G SP+ PGPRP AG P +SP
Sbjct: 852 KEEPK---KAQTKMSPKPDAKPMPKG--------SPTP-PGPRPTAGQTVPTPQQSPKPQ 899
Query: 562 PGPRP----AGPAGDEPAESPSETPGPSPAGPTRDEPAE---------SPSETPGPRPAG 608
R G D P P+ TP + G A S + PGP
Sbjct: 900 EQSRRFSLNLGSITDAPKSQPT-TPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQS 958
Query: 609 PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQ 664
G ++P+ + P GP P + P P+ + P + E KA A +L+
Sbjct: 959 GPGAPMKQAPAPSQPPTSQGP----PKSTGQAPPAPAKSIPVKKE-TKAPAAEKLE 1009
Score = 37.4 bits (85), Expect = 0.046
Identities = 44/193 (22%), Positives = 73/193 (37%), Gaps = 15/193 (7%)
Query: 478 TLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAES 537
T + +P + + ++D PK+ P T SP+ A P
Sbjct: 668 TTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEAD 727
Query: 538 PSETPGP--RPAGPAGDEPAESPSETP-GPRPAGPAGDEPAESPSETPGPSPAGPTRDEP 594
P P P+ P+ + A + P P+ P D + S + T P+ + +
Sbjct: 728 SLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQA 787
Query: 595 AES---PSETPGPRPA---GPAGDEPAESPSETPGPRPAGPAG--DEPAESPSETPGPSP 646
E P +T +P+ P G++ + S+ PRPA + P S SE+ G
Sbjct: 788 EEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAI-PRPASDSKIISHPGPS-SESKGQKQ 845
Query: 647 AGPT--RDEPAKA 657
P ++EP KA
Sbjct: 846 VDPVQKKEEPKKA 858
Score = 32.7 bits (73), Expect = 1.1
Identities = 60/284 (21%), Positives = 94/284 (33%), Gaps = 39/284 (13%)
Query: 345 PQPRSVEPQDAGPLERSQGDEAGGHGEDRPEP----LSPKESKKRKLELSR--REQPPTE 398
P + + Q+ LE+ D+A E +P P L P+E K R E E+ PT
Sbjct: 1187 PMVTTDQKQEESKLEK---DKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTP 1243
Query: 399 PGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKR 458
+ E + A + L + ++ +++ G+ + VQ +QP K
Sbjct: 1244 EDKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQ--------TKM 1295
Query: 459 RKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSP 518
+ G S T + P P K E G E+ + + P
Sbjct: 1296 EGLPSGTPQSLP-KEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQP 1354
Query: 519 SETPGPSPAGPAGDEPAESPSETPG---------------------PRPAGPAGDEPAES 557
G S G + D + S E P P+ P+ ES
Sbjct: 1355 KSPQGLSDTGYSSDGISSSLGEIPSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLES 1414
Query: 558 PSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSET 601
+ A DE +E ++ SP P E +S SET
Sbjct: 1415 TVLSILEAQASTLADEKSEKKTQPHEVSPEQPKDQEKTQSLSET 1458
Score = 31.6 bits (70), Expect = 2.5
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 569 PAGDEPAESPSETPGPSPAGP-TRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA 627
PA P+ SPS + P+ P R + ++ P P P P P P P P P
Sbjct: 2372 PASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPT 2431
Query: 628 GP 629
P
Sbjct: 2432 SP 2433
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 91.3 bits (225), Expect = 3e-18
Identities = 91/390 (23%), Positives = 151/390 (38%), Gaps = 36/390 (9%)
Query: 320 DHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGED-RPEPLS 378
D EAS + T + + EG ++ Q P+ + QG +D P+ +S
Sbjct: 181 DSEASQEETTKKQKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSIS 240
Query: 379 PKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCA--LSQGSLRTGTQEVGGQDP 436
++ +K K + +P P ++ K+ L + Q + G + V P
Sbjct: 241 SQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRG-ESVKPSLP 299
Query: 437 GEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALA-----------GSP 485
+ P +QP + + K G A SG + LA G+
Sbjct: 300 SPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTT 359
Query: 486 APSGHP----KAGHSENGVEEDTEGRTGPKE-----GTPGSPSETPGPSPAG-------- 528
P P K + G E+ + + GPK G +P++ PGP+
Sbjct: 360 KPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
Query: 529 PAGDEPA-ESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPA 587
P +P +SP++ PGP P + P++ GP P + PS+ PGP+
Sbjct: 420 PLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKP 479
Query: 588 GPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPA 647
P + PA+ P + PG A P +P + P PA P+ +P + + P A
Sbjct: 480 PPQQPGPAKPPPQQPG--SAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSA 537
Query: 648 GPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
P+ +P+ A +A+ Q + S SGKP
Sbjct: 538 KPSAQQPSPAKPSAQ-QSTKPVSQTGSGKP 566
Score = 77.8 bits (190), Expect = 3e-14
Identities = 84/370 (22%), Positives = 142/370 (38%), Gaps = 36/370 (9%)
Query: 306 GSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERS---- 361
G ++++G+P + + ++ P G G+ +GP PL+R
Sbjct: 226 GRDPLQQDGTPKSISSQQPEKIKSQPP----GTGKPIQGPTQTPQTDHAKLPLQRDASRP 281
Query: 362 QGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPG-----PQSASEVEKIALNLEG 416
Q +A + +P P SK + + + P +PG P A + + +
Sbjct: 282 QTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKP 341
Query: 417 CALSQGSLRTGTQEVGG-QDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGG 475
A G+++ Q G + P + + P + P ++K + + V
Sbjct: 342 LAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTP 401
Query: 476 AQTLALAGSPAPS-GHPKAGHSENGVEEDTEG----RTGPKEGTPGS-PSETPGPSPAGP 529
AQ A P G PK + G++ + +T ++ PG P++ GP
Sbjct: 402 AQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA 461
Query: 530 AGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAES--PSETPGPSPA 587
P + PS+ PGP P PA+ P + PG A P +P + P + PGP+
Sbjct: 462 QQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPG--SAKPPSQQPGSTKPPPQQPGPAKP 519
Query: 588 GPTRDEPAESPSETPG--------PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPS 639
P + + PS+ PG P PA P+ + + S+T +P P P SPS
Sbjct: 520 SPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQP----PTVSPS 575
Query: 640 ETPGPSPAGP 649
PS P
Sbjct: 576 AKQPPSQGLP 585
Score = 45.1 bits (105), Expect = 2e-04
Identities = 84/356 (23%), Positives = 123/356 (34%), Gaps = 59/356 (16%)
Query: 345 PQPRSVEPQ-DAGPLERSQGDEAGGHGEDRPEPL--------SPKESKKRKLELSR--RE 393
PQP+ P+ DA P + D + +P PL SP K+ E +
Sbjct: 677 PQPQQTSPKKDAAPKQ----DLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKP 732
Query: 394 QPPTEPGPQSASEVEKIA---------LNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCR 444
PP EP S + +A + +S S T + +A +
Sbjct: 733 APPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTT 792
Query: 445 QPLGARVADKVRKRRKVDEGAG--DSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEE 502
PL A + E DS A+ + + ++ P PS K + V++
Sbjct: 793 PPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIIS-HPGPSSESKGQKQVDPVQK 851
Query: 503 DTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRP-AGPAGDEPAESPSET 561
E + K T SP P P G SP+ PGPRP AG P +SP
Sbjct: 852 KEEPK---KAQTKMSPKPDAKPMPKG--------SPTP-PGPRPTAGQTVPTPQQSPKPQ 899
Query: 562 PGPRP----AGPAGDEPAESPSETPGPSPAGPTRDEPAE---------SPSETPGPRPAG 608
R G D P P+ TP + G A S + PGP
Sbjct: 900 EQSRRFSLNLGSITDAPKSQPT-TPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQS 958
Query: 609 PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQ 664
G ++P+ + P GP P + P P+ + P + E KA A +L+
Sbjct: 959 GPGAPMKQAPAPSQPPTSQGP----PKSTGQAPPAPAKSIPVKKE-TKAPAAEKLE 1009
Score = 37.4 bits (85), Expect = 0.046
Identities = 44/193 (22%), Positives = 73/193 (37%), Gaps = 15/193 (7%)
Query: 478 TLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAES 537
T + +P + + ++D PK+ P T SP+ A P
Sbjct: 668 TTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEAD 727
Query: 538 PSETPGP--RPAGPAGDEPAESPSETP-GPRPAGPAGDEPAESPSETPGPSPAGPTRDEP 594
P P P+ P+ + A + P P+ P D + S + T P+ + +
Sbjct: 728 SLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQA 787
Query: 595 AES---PSETPGPRPA---GPAGDEPAESPSETPGPRPAGPAG--DEPAESPSETPGPSP 646
E P +T +P+ P G++ + S+ PRPA + P S SE+ G
Sbjct: 788 EEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAI-PRPASDSKIISHPGPS-SESKGQKQ 845
Query: 647 AGPT--RDEPAKA 657
P ++EP KA
Sbjct: 846 VDPVQKKEEPKKA 858
Score = 32.7 bits (73), Expect = 1.1
Identities = 60/284 (21%), Positives = 94/284 (33%), Gaps = 39/284 (13%)
Query: 345 PQPRSVEPQDAGPLERSQGDEAGGHGEDRPEP----LSPKESKKRKLELSR--REQPPTE 398
P + + Q+ LE+ D+A E +P P L P+E K R E E+ PT
Sbjct: 1187 PMVTTDQKQEESKLEK---DKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTP 1243
Query: 399 PGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKR 458
+ E + A + L + ++ +++ G+ + VQ +QP K
Sbjct: 1244 EDKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQ--------TKM 1295
Query: 459 RKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSP 518
+ G S T + P P K E G E+ + + P
Sbjct: 1296 EGLPSGTPQSLP-KEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQP 1354
Query: 519 SETPGPSPAGPAGDEPAESPSETPG---------------------PRPAGPAGDEPAES 557
G S G + D + S E P P+ P+ ES
Sbjct: 1355 KSPQGLSDTGYSSDGISSSLGEIPSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLES 1414
Query: 558 PSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSET 601
+ A DE +E ++ SP P E +S SET
Sbjct: 1415 TVLSILEAQASTLADEKSEKKTQPHEVSPEQPKDQEKTQSLSET 1458
Score = 31.6 bits (70), Expect = 2.5
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 569 PAGDEPAESPSETPGPSPAGP-TRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA 627
PA P+ SPS + P+ P R + ++ P P P P P P P P P
Sbjct: 2372 PASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPT 2431
Query: 628 GP 629
P
Sbjct: 2432 SP 2433
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 89.0 bits (219), Expect = 1e-17
Identities = 73/218 (33%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSE 540
GSP P+G PK E G + G G K G+PGSP P GPAG + P
Sbjct: 512 GSPGPAG-PKGSPGEAGRPGEA-GLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPG 569
Query: 541 TPG----------PRPAGPAGDEPAESPSETPGPRPA-GPAGDEPAESPSETPGPSPAGP 589
PG P P G AG+ PGP A GPAG + E+ ++ P P PAGP
Sbjct: 570 PPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKD-GEAGAQGP-PGPAGP 627
Query: 590 TRDEPAESPSETPG----PRPAGPAGD--EPAES--PSETPGPRPAGPAGDE--PAESPS 639
+ + P+ +PG P PAGP G+ +P E P + P P+G G+ P E
Sbjct: 628 AGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGV 687
Query: 640 ETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
+ P P PAGP A + A+ + G P
Sbjct: 688 QGP-PGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAP 724
Score = 75.9 bits (185), Expect = 1e-13
Identities = 112/383 (29%), Positives = 134/383 (34%), Gaps = 47/383 (12%)
Query: 306 GSRKVEEEGSPGDPD-HEASTQGRTCGPEHSKGGGRVDEGPQ----PRSVEPQDAGPLER 360
G+ E E P PD E+ T T G E KG D GP+ P +D P +
Sbjct: 83 GAEVPEGECCPVCPDGSESPTDQETTGVEGPKG----DTGPRGPRGPAGPPGRDGIPGQP 138
Query: 361 SQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTE-PGPQSASEVEKIALNLEGCAL 419
G G P L + + + PGP S G
Sbjct: 139 GLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPS-------GPRGLPG 191
Query: 420 SQGSLRTGTQEVGGQDPGEAVQP-CRQPLGARVADKVRKRRKVDEGAG------DSAAVA 472
G+ G Q G PGE +P P+G R + D AG +
Sbjct: 192 PPGA--PGPQGFQGP-PGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPG 248
Query: 473 SGGAQTL-ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAG 531
GA+ L AG P GH G S + G GPK G PGSP E P GP G
Sbjct: 249 PQGARGLPGTAGLPGMKGH--RGFSGLDGAKGDAGPAGPK-GEPGSPGENGAPGQMGPRG 305
Query: 532 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPSPAGPT 590
PG PAG G++ A + PGP PAGP G A GP GP
Sbjct: 306 LPGERGRPGAPG--PAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQ--GPR 361
Query: 591 RDEPAESPSETPGP----RPAGPAGDEPAESPSETPG----PRPAGPAGDEPAESPSETP 642
E + PGP AGPAG+ A+ G P AG G A PS
Sbjct: 362 GSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQ 421
Query: 643 GP-SPAGP--TRDEPAKAGEAAE 662
GP P GP EP G +
Sbjct: 422 GPGGPPGPKGNSGEPGAPGSKGD 444
Score = 71.6 bits (174), Expect = 2e-12
Identities = 120/420 (28%), Positives = 153/420 (36%), Gaps = 96/420 (22%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDR 373
G+PG P GP +G G GP+ S EP G S+GD G GE
Sbjct: 407 GAPGFPGAR--------GPSGPQGPGG-PPGPKGNSGEPGAPG----SKGD-TGAKGEPG 452
Query: 374 PEPLS--PKESKKRKLELSRREQPPTE-PGP--QSASEVEKIALNLEGCALSQGSL-RTG 427
P + P + + +R E PT PGP + + +G A +G G
Sbjct: 453 PVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERG 512
Query: 428 TQEVGGQ--DPGEAVQPCRQPL-GARVADKVRKRRKVDEGAGDSAAV------------- 471
+ G PGEA +P L GA+ D G
Sbjct: 513 SPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPG 572
Query: 472 ASGGAQTLALAGSPAPSGHP-KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPA 530
A G A + G +G P KAG E GV G GP G G P PAGPA
Sbjct: 573 ARGQAGVMGFPGPKGAAGEPGKAG--ERGVP-GPPGAVGPA-GKDGEAGAQGPPGPAGPA 628
Query: 531 GDEPAESPSETPG----PRPAGPAGD--EPAES--PSETPGPRPAGPAGDE--PAESPSE 580
G+ + P+ +PG P PAGP G+ +P E P + P P+G G+ P E +
Sbjct: 629 GERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQ 688
Query: 581 TPGPSPAGPTR------DEPAESPSETPG----------------------PRPAGPAGD 612
P P PAGP ++ A+ + PG P P G GD
Sbjct: 689 GP-PGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGD 747
Query: 613 EPAESPSETPGPR----------PAGPAGDEPAESPSETPGPS-PAGPT--RDEPAKAGE 659
+ +PG P GPAG A GPS PAGPT R P GE
Sbjct: 748 AGPKGADGSPGKDGVRGLTGPIGPPGPAG---APGDKGESGPSGPAGPTGARGAPGDRGE 804
Score = 71.6 bits (174), Expect = 2e-12
Identities = 115/428 (26%), Positives = 139/428 (32%), Gaps = 134/428 (31%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKG----GGRVDE-GPQPRSVEPQDAGPLERSQGDEAGG 368
G+PG S GP + G GRV GP + P GP + G G
Sbjct: 857 GAPGAKGARGSA-----GPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGK--GP 909
Query: 369 HGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGT 428
GE P R E+ PP PGP EK + +G A + G+ G
Sbjct: 910 RGETGPAG--------RPGEVG----PPGPPGPAG----EKGSPGADGPAGAPGT--PGP 951
Query: 429 QEVGGQD-----------------PGEAVQPCRQ-PLGARVADKVRKRRKVDEGAGDSAA 470
Q + GQ PG + +P +Q P GA +G+
Sbjct: 952 QGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGA---------------SGERGP 996
Query: 471 VASGGAQTLALAGSPAPSGHPKAGHSENGVEED-------TEGRTGPKEGTPGSPSETPG 523
G LAG P SG A +E D G TGP G PG+P
Sbjct: 997 PGPMGPP--GLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPA-GPPGAPGAPGA 1053
Query: 524 PSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPR------------------ 565
P P GPAG + ET PAGP G A P+ GPR
Sbjct: 1054 PGPVGPAGK--SGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHR 1111
Query: 566 -------PAGPAGDEPAESPSETPGPS-PAGPTRDEPAES---------PSETPGPRPAG 608
P GP G + PS GP+ P GP A P PGPR G
Sbjct: 1112 GFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPR--G 1169
Query: 609 PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAG--------PTRDEPAKAGEA 660
GD AGP G P PGP AG P +++ G
Sbjct: 1170 RTGD--------------AGPVGPPGPPGPPGPPGPPSAGFDFSFLPQPPQEKAHDGGRY 1215
Query: 661 AELQDAEV 668
DA V
Sbjct: 1216 YRADDANV 1223
Score = 69.7 bits (169), Expect = 8e-12
Identities = 112/400 (28%), Positives = 133/400 (33%), Gaps = 71/400 (17%)
Query: 305 EGSRKVEEE----GSPGDPDHEASTQGR-------TCGPEHSKGGGRVDEGPQPRSVEPQ 353
EG R E G PG P R GP+ G R GP P
Sbjct: 466 EGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPK-GPAGERGSPGPAGPKGSPG 524
Query: 354 DAG-PLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIAL 412
+AG P E G G K R PP PG + + V
Sbjct: 525 EAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFP- 583
Query: 413 NLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVA 472
+G A G + G + V G P AV P + A E G+
Sbjct: 584 GPKGAAGEPG--KAGERGVPG--PPGAVGPAGKDGEAGAQGPPGPAGPAGE-RGEQGPAG 638
Query: 473 SGGAQTL-ALAGSPAPSGHPKAGHSENGVEEDTEGRTGP-----KEGTPGSPSETPGPSP 526
S G Q L AG P +G P E GV D G GP + G PG P P
Sbjct: 639 SPGFQGLPGPAGPPGEAGKP----GEQGVPGDL-GAPGPSGARGERGFPGERGVQGPPGP 693
Query: 527 AGPAG------DEPAESPSETPG----------------------PRPAGPAGDEPAESP 558
AGP G ++ A+ + PG P P G GD +
Sbjct: 694 AGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGA 753
Query: 559 SETPGPR-------PAGPAGDEPAESPSETPGPS-PAGPTRDEPAESPSETPGPRPAGPA 610
+PG P GP G A GPS PAGPT A P + P P GPA
Sbjct: 754 DGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGA--PGDRGEPGPPGPA 811
Query: 611 GDEPAESPSETPGPRPAGPAGDEPAESPSETPGPS-PAGP 649
G A P P G GD A+ + PGP+ PAGP
Sbjct: 812 GF--AGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGP 849
Score = 69.7 bits (169), Expect = 8e-12
Identities = 119/418 (28%), Positives = 139/418 (33%), Gaps = 103/418 (24%)
Query: 314 GSPGDPDHEAST--------QGRTC--GPEHSKGGGRVDEGPQPRSV--EPQDAGPL--- 358
GSPG P + T GR GP ++G V P P+ EP AG
Sbjct: 542 GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVP 601
Query: 359 -------ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPT-EPGPQSASEVEKI 410
+ EAG G P P P R EQ P PG Q
Sbjct: 602 GPPGAVGPAGKDGEAGAQGP--PGPAGPAGE--------RGEQGPAGSPGFQG------- 644
Query: 411 ALNLEGCALSQGSL-RTGTQEVGGQ--------------DPGE-AVQPCRQPLGARVADK 454
L G A G + G Q V G PGE VQ P G R A+
Sbjct: 645 ---LPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANG 701
Query: 455 VRKRRKVDEGAGDSAAVASGGAQTL-ALAGSPAPSGH-----PKAGHSENGVEEDTEGRT 508
D GD+ A + G+Q L G P G PK + G + +G
Sbjct: 702 APGN---DGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAG-PKGADGSP 757
Query: 509 GPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR-------------PAGPAGDEPA 555
G K+G G P PAG GD+ PS GP P GPAG
Sbjct: 758 G-KDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGP 816
Query: 556 ESPSETPG----PRPAGPAGDEPAESPSETPG-PSPAGPTRDEPAESPSETPGPRPA--- 607
PG P AG GD P+ G P P G A+ + GP A
Sbjct: 817 PGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGF 876
Query: 608 -GPAGDEPAESPSETPG-PRPAGPAGDE----------PAESPSETPGPSPAGPTRDE 653
G AG PS G P P GPAG E PA P E P P GP ++
Sbjct: 877 PGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEK 934
Score = 69.3 bits (168), Expect = 1e-11
Identities = 101/365 (27%), Positives = 126/365 (34%), Gaps = 48/365 (13%)
Query: 331 GPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELS 390
GP +G P P+ + P E G G P + + + K
Sbjct: 182 GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP 241
Query: 391 RREQPPTEPGPQSASEVEKIALNLEGCALSQG--SLRTGTQEVGGQDP-GEAVQPCRQPL 447
PP GPQ A + A L G +G L + G P GE P
Sbjct: 242 GERGPP---GPQGARGLPGTA-GLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGA 297
Query: 448 GARVADKVRKRRKVDEGAGDSAAV-----ASGGAQTLALAGSPAPSGHPKA-GHSENGVE 501
++ + + GA A A+G A G P G P A G
Sbjct: 298 PGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGP 357
Query: 502 EDTEGRTGPKEGTPGSPSETPGPS-PAGPAGDEPAESPSETPG----PRPAGPAGDEPAE 556
+ G GP +G G P PGP+ AGPAG+ A+ G P AG G A
Sbjct: 358 QGPRGSEGP-QGVRGEPGP-PGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGAR 415
Query: 557 SPSETPGP-RPAGPAGD--EPAESPSE-------TPGP----SPAGPTRDEPAESPSETP 602
PS GP P GP G+ EP S+ PGP P GP +E P
Sbjct: 416 GPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEP 475
Query: 603 GPRP-AGPAGDEPAESPSETPG----PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKA 657
GP GP G+ PG P GPAG E P PAGP + P +A
Sbjct: 476 GPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAG--------ERGSPGPAGP-KGSPGEA 526
Query: 658 GEAAE 662
G E
Sbjct: 527 GRPGE 531
Score = 67.8 bits (164), Expect = 3e-11
Identities = 76/254 (29%), Positives = 92/254 (36%), Gaps = 54/254 (21%)
Query: 463 EGAGDSAAV--ASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK--EGTPGSP 518
+GA SA A+G G P PSG+ AG EG GP+ G G P
Sbjct: 862 KGARGSAGPPGATGFPGAAGRVGPPGPSGN--AGPPGPPGPAGKEGGKGPRGETGPAGRP 919
Query: 519 SETPGPSPAGPAG-------DEPAESPSETPGPRPA----------------------GP 549
E P P GPAG D PA +P TPGP+ GP
Sbjct: 920 GEVGPPGPPGPAGEKGSPGADGPAGAPG-TPGPQGIAGQRGVVGLPGQRGERGFPGLPGP 978
Query: 550 AGDEPAESPSETPG----PRPAGPAG--DEPAESPSETPGPSPAGPTRDEPAESPSETPG 603
+G+ + PS G P P GP G P ES E + P RD + +
Sbjct: 979 SGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGE 1038
Query: 604 PRPAGPAGDEPAESPSETPGPR-------PAGPAGDEPAESPSETPGPS-PAGPTRDEPA 655
PAGP G A GP GPAG P GP+ P GP D+
Sbjct: 1039 TGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDK-- 1096
Query: 656 KAGEAAELQDAEVE 669
GE E D ++
Sbjct: 1097 --GETGEQGDRGIK 1108
Score = 66.2 bits (160), Expect = 9e-11
Identities = 70/230 (30%), Positives = 85/230 (36%), Gaps = 45/230 (19%)
Query: 473 SGGAQTLALAGSPAPSGHP-KAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGP 529
SG A G+P G P G + +G+ G K G G+ + P PAGP
Sbjct: 787 SGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGP 846
Query: 530 AGDEPAESPSETPGPRPA-------------GPAGDEPAESPSETPG-PRPAGPAGDE-- 573
AG PG + A G AG PS G P P GPAG E
Sbjct: 847 AGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGG 906
Query: 574 --------PAESPSETPGPSPAGPTRDE---PAESPSETPG-PRPAGPAGDE-----PAE 616
PA P E P P GP ++ A+ P+ PG P P G AG P +
Sbjct: 907 KGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQ 966
Query: 617 SPSETPGPRPAGPAGDEPAESPSETPG----PSPAGPTRDEPAKAGEAAE 662
E P GP+G+ + PS G P P GP P AG E
Sbjct: 967 R-GERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGP----PGLAGPPGE 1011
Score = 52.0 bits (123), Expect = 2e-06
Identities = 54/175 (30%), Positives = 64/175 (36%), Gaps = 36/175 (20%)
Query: 515 PGSPSETPGPSPAGPAGDEP--------AESPSETPGPR----PAGPAGDEPAESPSETP 562
PG+ P P G E E P GPR PAGP G + P
Sbjct: 82 PGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLP 141
Query: 563 G-PRPAGPAG----------------DEPAESPSETPGPSPAGPTRDEPAESPSETPGPR 605
G P P GP G DE + PG P GP+ P PGP+
Sbjct: 142 GPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPG--PMGPSGPRGLPGPPGAPGPQ 199
Query: 606 P-AGPAGDEPAESPSETP-GPR-PAGPAGDEPAESPSETPG-PSPAGPTRDEPAK 656
GP G EP E + P GPR P GP G + + PG P GP + A+
Sbjct: 200 GFQGPPG-EPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGAR 253
Score = 45.4 bits (106), Expect = 2e-04
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 40/150 (26%)
Query: 529 PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPG-PSP 586
P + +ESP++ GP GD GPR P GPAG + PG P P
Sbjct: 93 PVCPDGSESPTDQETTGVEGPKGDT---------GPRGPRGPAGPPGRDGIPGQPGLPGP 143
Query: 587 AGPTRDEPAESPSETPGPRPAGPAG-------------DEPAESPSETPGPRPAGPAGDE 633
GP P P GP G DE + PGP GP+G
Sbjct: 144 PGP--------------PGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPM--GPSGPR 187
Query: 634 PAESPSETPGPSPAGPTRDEPAKAGEAAEL 663
P PGP EP + G + +
Sbjct: 188 GLPGPPGAPGPQGFQGPPGEPGEPGASGPM 217
Score = 44.7 bits (104), Expect = 3e-04
Identities = 90/336 (26%), Positives = 106/336 (31%), Gaps = 88/336 (26%)
Query: 287 GPQDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKG--------G 338
GP + P P P E+GSPG D A G T GP+ G G
Sbjct: 914 GPAGRPGEVGPPGPPGP------AGEKGSPG-ADGPAGAPG-TPGPQGIAGQRGVVGLPG 965
Query: 339 GRVDEG----PQPRSVEPQDAGPLERSQGDEAGGHGEDRPE-PLSPKESKKRKLELSRRE 393
R + G P P S EP GP +G GE P P+ P E R
Sbjct: 966 QRGERGFPGLPGP-SGEPGKQGP--------SGASGERGPPGPMGPPGLAGPPGESGREG 1016
Query: 394 QPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVAD 453
P E P +G ++G E G P A P A
Sbjct: 1017 APGAEGSP-----------GRDGSPGAKGD----RGETGPAGPPGAPGAPGAPGPVGPAG 1061
Query: 454 KVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDT--------E 505
K R + AG + V GA+ G P G P+ E G + D
Sbjct: 1062 KSGDRGETGP-AGPAGPVGPVGAR-----GPAGPQG-PRGDKGETGEQGDRGIKGHRGFS 1114
Query: 506 GRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPG-------------PRPAGPAGD 552
G GP G PGSP E +GPAG + PG P P G GD
Sbjct: 1115 GLQGPP-GPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGD 1173
Query: 553 EPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAG 588
AGP G P PGP AG
Sbjct: 1174 --------------AGPVGPPGPPGPPGPPGPPSAG 1195
Score = 32.7 bits (73), Expect = 1.1
Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 572 DEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPR-PAGPA 630
DE P P + +ESP++ GP GD GPR PAGP
Sbjct: 76 DETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPR------GPRGPAGPP 129
Query: 631 GDEPAESPSETPG-PSPAGP 649
G + PG P P GP
Sbjct: 130 GRDGIPGQPGLPGPPGPPGP 149
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 88.2 bits (217), Expect = 2e-17
Identities = 97/369 (26%), Positives = 130/369 (35%), Gaps = 44/369 (11%)
Query: 319 PDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLS 378
P S G+ GP GG +GP P +PQ GP + G +P+
Sbjct: 47 PQGPPSPPGKPQGPPPQ--GGNQPQGPPPPPGKPQ--GPPPQGGNKPQGPPPPGKPQGPP 102
Query: 379 PKESKKRKLELSRREQP--PTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDP 436
P+ K R S R P P P PQ ++ + G G + G GG P
Sbjct: 103 PQGDKSR----SPRSPPGKPQGPPPQGGNQPQ-------GPPPPPGKPQ-GPPPQGGNKP 150
Query: 437 GEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHS 496
+ P +P G + R GG Q G P P G P+
Sbjct: 151 -QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQP---QGPPPPPGKPQGPPP 206
Query: 497 ENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP-GPRPAG---PAGD 552
+ G K P P + GP P G + A SP P GP P G P G
Sbjct: 207 QGG----------NKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGP 256
Query: 553 EPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETP-GPRPAG--- 608
P P + GP P G + P + GP P G ++ + SP P GP P G
Sbjct: 257 PPP--PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQ 314
Query: 609 PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEV 668
P G P P + GP P G + P + GP P G ++ A++ +
Sbjct: 315 PQGPPPP--PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQ 372
Query: 669 ESSAKSGKP 677
E + G P
Sbjct: 373 EGNNPQGPP 381
Score = 84.7 bits (208), Expect = 3e-16
Identities = 94/363 (25%), Positives = 126/363 (34%), Gaps = 54/363 (14%)
Query: 303 PLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKG--------GGRVDEGPQPRSVEPQD 354
P +G K + PG P ++ P G GG +GP P +PQ
Sbjct: 82 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ- 140
Query: 355 AGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQP--PTEPGPQSASEVEKIAL 412
GP + G +P+ P+ K + S R P P P PQ ++ +
Sbjct: 141 -GPPPQGGNKPQGPPPPGKPQGPPPQGDNKSR---SSRSPPGKPQGPPPQGGNQPQ---- 192
Query: 413 NLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVA 472
G G+ G Q +P G K + + SA
Sbjct: 193 --------------GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSP 238
Query: 473 SGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGD 532
G Q G P G P G + + G K P P + GP P G +
Sbjct: 239 PGKPQGPPPQGGNQPQGPPPPP----GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 294
Query: 533 EPAESPSETP-GPRPAG---PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAG 588
+ SP P GP P G P G P P + GP P G + P + GP P G
Sbjct: 295 RSSRSPPGKPQGPPPQGGNQPQGPPPP--PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 352
Query: 589 PTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAG 648
++ A SP PG +P GP P + + GP P PAG P + P P P G
Sbjct: 353 GSKSRSARSP---PG-KPQGP----PQQEGNNPQGPPP--PAGGNP-QQPQAPPAGQPQG 401
Query: 649 PTR 651
P R
Sbjct: 402 PPR 404
Score = 71.2 bits (173), Expect = 3e-12
Identities = 66/236 (27%), Positives = 83/236 (35%), Gaps = 35/236 (14%)
Query: 462 DEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSET 521
D +S ++ +G Q G P G P G P +G G+ +
Sbjct: 22 DVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGP---------PPQG--GNQPQG 70
Query: 522 PGPSPAGPAGDEP--------AESPSETPGPRPAGPAGDEPAESPSETPGPRPAG---PA 570
P P P P G P P + GP P G P P + GP P G P
Sbjct: 71 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 130
Query: 571 GDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETP-GPRPAG- 628
G P P + GP P G + + P + GP P G + SP P GP P G
Sbjct: 131 G--PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGG 188
Query: 629 --PAGDEPAESPSETPGPSPAG---PTRDEPAKAGEAAELQDAEVESSAKS--GKP 677
P G P P + GP P G P P + Q SA+S GKP
Sbjct: 189 NQPQG--PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKP 242
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 84.7 bits (208), Expect = 3e-16
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 484 SPAPSGHPKAGHSENGVE-EDTEGRTGPKEGTP---GSPSETPGPSPAGPAGDEP-AESP 538
+P P G P+ + G + + R G EG P G+ S+ P P P P G P +
Sbjct: 50 TPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQ 109
Query: 539 SETPGPRPAGPAGDEP-AESPSETPGPRPAGPAGDEP-AESPSETPGPSPAGPTRDEP-A 595
S+ P PRP P G P + S+ P PRP P G P + S+ P P P P P
Sbjct: 110 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG 169
Query: 596 ESPSETPGPRPAGPAGDEP-AESPSETPGPRPAGPAGDEPAESPSETPGPSP-AGPTRDE 653
+ S+ P P P P G P + S+ P PRP P G P + +++ GP P G
Sbjct: 170 GNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEG-PPPQGGNQSQGPPPRPGKPEGP 228
Query: 654 PAKAG 658
P++ G
Sbjct: 229 PSQGG 233
Score = 81.6 bits (200), Expect = 2e-15
Identities = 60/177 (33%), Positives = 78/177 (44%), Gaps = 10/177 (5%)
Query: 488 SGHPKAGHSENGVE-EDTEGRTGPKEGTP---GSPSETPGPSPAGPAGDEP-AESPSETP 542
SG P+ + G + + T G EG P G+ S+ P P P P G P + S+ P
Sbjct: 33 SGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP 92
Query: 543 GPRPAGPAGDEP-AESPSETPGPRPAGPAGDEP-AESPSETPGPSPAGPTRDEP-AESPS 599
PRP P G P + S+ P PRP P G P + S+ P P P P P + S
Sbjct: 93 PPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQS 152
Query: 600 ETPGPRPAGPAGDEP-AESPSETPGPRPAGPAGDEP-AESPSETPGPSPAGPTRDEP 654
+ P PRP P G P + S+ P P P P G P + S+ P P P P P
Sbjct: 153 QGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP 209
Score = 81.3 bits (199), Expect = 3e-15
Identities = 72/252 (28%), Positives = 95/252 (37%), Gaps = 22/252 (8%)
Query: 427 GTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPA 486
G + GG P P +P G + + GG Q+ P
Sbjct: 38 GRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 97
Query: 487 -PSGHPKAGHSENGVEEDTEGRTGPKEGTP---GSPSETPGPSPAGPAGDEP-AESPSET 541
P G P G +++ + R G EG P G+ S+ P P P P G P + S+
Sbjct: 98 KPEGQPPQGGNQS---QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 154
Query: 542 PGPRPAGPAGDEP-AESPSETPGPRPAGPAGDEP-AESPSETPGPSPAGPTRDEP-AESP 598
P PRP P G P + S+ P P P P G P + S+ P P P P P +
Sbjct: 155 PPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 214
Query: 599 SETPGPRPAGPAG-DEPAESPSETPGPRPAGPAGDEPAES--------PSETPGPSPAG- 648
S+ P PRP P G + + P P P P G P E P GP P G
Sbjct: 215 SQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGG 274
Query: 649 -PTRDEPAKAGE 659
P + P AG+
Sbjct: 275 NPQQPLPPPAGK 286
Score = 79.0 bits (193), Expect = 1e-14
Identities = 59/190 (31%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 474 GGAQTLALAGSPA-PSGHPKAGHSENGVEEDTEGRTGPKEGTP---GSPSETPGPSPAGP 529
GG Q+ P P G P G +++ + R G EG P G+ S+ P P P P
Sbjct: 106 GGNQSQGPPPRPGKPEGPPPQGGNQS---QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP 162
Query: 530 AGDEP-AESPSETPGPRPAGPAGDEP-AESPSETPGPRPAGPAGDEPAESPSETPGPSP- 586
G P + S+ P P P P G P + S+ P PRP P G P + +++ GP P
Sbjct: 163 EGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEG-PPPQGGNQSQGPPPR 221
Query: 587 AGPTRDEPAE--SPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP 644
G P++ + + P P P P G P E P P P G P + P P
Sbjct: 222 PGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLP 281
Query: 645 SPAGPTRDEP 654
PAG + P
Sbjct: 282 PPAGKPQGPP 291
Score = 76.6 bits (187), Expect = 7e-14
Identities = 61/182 (33%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 479 LALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEP-AES 537
LAL+ + + + S + + EGR P+ G P TP P P P G P +
Sbjct: 11 LALSSAQSLNEDVSQEESPSVISGKPEGRR-PQGGN--QPQRTP-PPPGKPEGRPPQGGN 66
Query: 538 PSETPGPRPAGPAGDEP-AESPSETPGPRPAGPAGDEP-AESPSETPGPSPAGPTRDEP- 594
S+ P PRP P G P + S+ P PRP P G P + S+ P P P P P
Sbjct: 67 QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQ 126
Query: 595 AESPSETPGPRPAGPAGDEP-AESPSETPGPRPAGPAGDEP-AESPSETPGPSPAGPTRD 652
+ S+ P PRP P G P + S+ P PRP P G P + S+ P P P P
Sbjct: 127 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGP 186
Query: 653 EP 654
P
Sbjct: 187 PP 188
Score = 75.1 bits (183), Expect = 2e-13
Identities = 76/297 (25%), Positives = 106/297 (35%), Gaps = 40/297 (13%)
Query: 371 EDRPEPLSPKESKKRKLELSRREQPPTEPG------PQSASEVEKIALNLEGCALSQGSL 424
E+ P +S K +R ++ ++ P PG PQ ++ + G G
Sbjct: 26 EESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQ-------GPPPRPGKP 78
Query: 425 RTGTQEVGGQDPGEAVQPCRQ----PLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA 480
+ G Q G +P + P G + R EG GG Q+
Sbjct: 79 EGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQ-----GGNQSQG 133
Query: 481 LAGSPA-PSGHPKAGHSENGVEEDTEGRTGPKEGTP---GSPSETPGPSPAGPAGDEP-A 535
P P G P G +++ + R G EG P G+ S+ P P P P G P
Sbjct: 134 PPPRPGKPEGPPPQGGNQS---QGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQG 190
Query: 536 ESPSETPGPRPAGPAGDEP-AESPSETPGPRPAGPAGDE---------PAESPSETPGPS 585
+ S+ P PRP P G P + S+ P PRP P G P P + GP
Sbjct: 191 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPP 250
Query: 586 PAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETP 642
P + + P GP P G +P P+ P P P G P P P
Sbjct: 251 PQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQP 307
Score = 66.6 bits (161), Expect = 7e-11
Identities = 80/333 (24%), Positives = 109/333 (32%), Gaps = 49/333 (14%)
Query: 289 QDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPR 348
+D + PS + EG R P +GR P+ GG +GP PR
Sbjct: 21 EDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRP--PQ----GGNQSQGPPPR 74
Query: 349 SVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVE 408
+P+ P GG+ P P K + ++ + PP PG
Sbjct: 75 PGKPEGPPP--------QGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKP------ 120
Query: 409 KIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDS 468
+G G + G P P G + R EG
Sbjct: 121 ------------EGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQ 168
Query: 469 AAVASGGAQTLALAGSPA-PSGHPKAGHSENGVEEDTEGRTGPKEGTP---GSPSETPGP 524
GG Q+ P P G P G +++ + R G EG P G+ S+ P P
Sbjct: 169 -----GGNQSQGPPPHPGKPEGPPPQGGNQS---QGPPPRPGKPEGPPPQGGNQSQGPPP 220
Query: 525 SPAGPAG-DEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 583
P P G + + P P P P G P E P P P G P + P
Sbjct: 221 RPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPL 280
Query: 584 PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAE 616
P PAG +P P G RP P +P +
Sbjct: 281 PPPAG----KPQGPPPPPQGGRPHRPPQGQPPQ 309
Score = 49.3 bits (116), Expect = 1e-05
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Query: 557 SPSETPGPRPAGPAGDEP--AESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEP 614
S E+P P G P P TP P R + S+ P PRP P G P
Sbjct: 24 SQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPP 83
Query: 615 -AESPSETPGPRPAGPAGDEPAESPSETPGPSP-AGPTRDEPAKAGEAAE 662
+ S+ P PRP P G +P + +++ GP P G P + G ++
Sbjct: 84 QGGNQSQGPPPRPGKPEG-QPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ 132
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 82.4 bits (202), Expect = 1e-15
Identities = 114/436 (26%), Positives = 151/436 (34%), Gaps = 65/436 (14%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDH--EASTQGRTCGPEHSKG-----GGRVDEGPQPRS 349
P+ P P ++G PG P E QG+T GP G G + GP
Sbjct: 798 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKT-GPPGPPGVVGPQGAAGETGPMGER 856
Query: 350 VEPQDAGP-----------LERSQGDEA--GGHGEDRPEPLSPKESKKRKLE------LS 390
P GP E ++GD G G+D P L ++ L
Sbjct: 857 GHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLK 916
Query: 391 RREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGAR 450
E P PGP + S E+ A G G R G Q G + V + P+G
Sbjct: 917 GNEGPSGPPGP-AGSPGERGAAGSGGPIGPPG--RPGPQGPPGAAGEKGVPGEKGPIGPT 973
Query: 451 VADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGP 510
D V+ + AG G + G P G K E+G G GP
Sbjct: 974 GRDGVQGPVGLPGPAGPPGVAGEDGDK--GEVGDPGQKG-TKGNKGEHG-PPGPPGPIGP 1029
Query: 511 KEGTPGSPSETPGPSPAGPAGDEPAESPSETPG-------------PRPAGPAGDEPAES 557
G PG+ P GP G A+ T G P P+G G+
Sbjct: 1030 V-GQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVG 1088
Query: 558 PSETPGPR-PAGPAGDEPAESPSETPGP-SPAGPTRDEPAESPSETPG----PRPAGPAG 611
P PGP P GPAG A+ P PG GP ++ S +PG P GP G
Sbjct: 1089 PMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRG 1148
Query: 612 DEPAESPSETPG----PRPAGPAGDE-------PAESPSETPGPSPAGPTRDEPAKAGEA 660
+ + S PG P P GP GD+ P P + P GP + AK
Sbjct: 1149 ERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRG 1208
Query: 661 AELQDAEVESSAKSGK 676
+ + + S +G+
Sbjct: 1209 EDGEPGQPGSPGPTGE 1224
Score = 82.4 bits (202), Expect = 1e-15
Identities = 119/427 (27%), Positives = 146/427 (34%), Gaps = 79/427 (18%)
Query: 312 EEGSPGDPDHEASTQGR--TCGPEHSKGGGRVDEGPQPRSVEPQDAG----PLERSQGDE 365
E G PG P QG T G E +KG D GP + AG P ER
Sbjct: 855 ERGHPGPPGPPGE-QGLPGTAGKEGTKG----DPGPPGAPGKDGPAGLRGFPGERGLPGT 909
Query: 366 AGGHG----EDRPEPLSPKESKKRKLELSRREQ--PPTEPGPQ----SASEV----EKIA 411
AGG G E P P S + PP PGPQ +A E EK
Sbjct: 910 AGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGP 969
Query: 412 LNLEGCALSQGSLR----TGTQEVGGQD--PGEAVQPCRQPLGARVADKVRKRRKVDEGA 465
+ G QG + G V G+D GE P K K K + G
Sbjct: 970 IGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDP---------GQKGTKGNKGEHGP 1020
Query: 466 GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK-----EGTPG---- 516
Q A P GH +E T G GP +G PG
Sbjct: 1021 PGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGE 1080
Query: 517 -------SPSETPGP-SPAGPAGDEPAESPSETPGP-RPAGPAGDEPAESPSETPG---- 563
P PGP P GPAG A+ P PG GP G++ S +PG
Sbjct: 1081 KGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGE 1140
Query: 564 PRPAGPAGDEPAESPSETPG----PSPAGPTRDE-------PAESPSETPGPRPAGPAGD 612
P GP G+ + S PG P P GPT D+ P P + P GP G
Sbjct: 1141 PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQ 1200
Query: 613 EPAESPSETPG----PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEV 668
+ A+ G P GP G+ P G PAG E + G+ A+ +
Sbjct: 1201 DGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRG--PAGSPGSEGRQGGKGAKGDPGAI 1258
Query: 669 ESSAKSG 675
+ K+G
Sbjct: 1259 GAPGKTG 1265
Score = 69.3 bits (168), Expect = 1e-11
Identities = 95/324 (29%), Positives = 117/324 (36%), Gaps = 55/324 (16%)
Query: 359 ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSA-SEVEKIAL-NLEG 416
+R + G GED PE PK R P +PGP E K+ + L G
Sbjct: 669 DRGEVGVPGSRGEDGPE--GPKG----------RTGPTGDPGPPGLMGEKGKLGVPGLPG 716
Query: 417 CALSQGSLRT----GTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVA 472
QG + G G+ + P G R R +R G A
Sbjct: 717 YPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQR------GPRGATG 770
Query: 473 SGGAQTLALAGSPAPSGHPKAGHSENGVE--EDTEGRTGPKEGTPGSPSETPGPSPAGPA 530
GA+ +G P G P E G+ + G GPK G PG P + P G
Sbjct: 771 KSGAK--GTSGGDGPHGPP----GERGLPGPQGPNGFPGPK-GPPGPPGKDGLPGHPGQR 823
Query: 531 GDEPAESPSETPGPRPA-GPAGDEPAESPSETPG-PRPAGPAGDEPA------ESPSETP 582
G+ + + PGP GP G P G P P GP G++ E P
Sbjct: 824 GEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDP 883
Query: 583 GPSPAGPTRDEPAES---PSETPGPRPAGPAGDEPAESPSETPGPRPA----GPAGDEPA 635
GP P P +D PA P E P AG G + E PS PGP + G AG
Sbjct: 884 GP-PGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGP 942
Query: 636 ESPSETPGPSPAGPTRDEPAKAGE 659
P PGP GP P AGE
Sbjct: 943 IGPPGRPGPQ--GP----PGAAGE 960
Score = 62.8 bits (151), Expect = 1e-09
Identities = 93/363 (25%), Positives = 119/363 (32%), Gaps = 75/363 (20%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPL-ERSQGDEAGGHG-E 371
G PG P GP G D GPQ + GP E+ + E+G G +
Sbjct: 1091 GPPGPP-----------GPRGPAGPNGAD-GPQGPPGGVGNLGPPGEKGEPGESGSPGIQ 1138
Query: 372 DRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEV 431
P P+ + K E + P EPGP +G G
Sbjct: 1139 GEPGVKGPRGERGEKGESGQ----PGEPGPPGP----------KGPTGDDGPKGNPGPVG 1184
Query: 432 GGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHP 491
DPG + G R D + R D G + G G P P G
Sbjct: 1185 FPGDPGPPGEG-----GPRGQDGAKGDRGEDGEPGQPGSPGPTGEN-----GPPGPLG-- 1232
Query: 492 KAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPG------ 543
K G + + E +G G K G G+P +T PAGPAG + PG
Sbjct: 1233 KRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1292
Query: 544 -PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-------PSPAGPTRDEPA 595
P G AG P PG R GD A+ PG P G D
Sbjct: 1293 RPGATGQAGPPGPVGPPGLPGLR-----GDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGL 1347
Query: 596 ESPSETPGPR----------PAGPAGDEPAESPSETPGPR----PAGPAGDEPAESPSET 641
P +PG + P GP G P+ G + P GP G++ + P
Sbjct: 1348 PGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGH 1407
Query: 642 PGP 644
PGP
Sbjct: 1408 PGP 1410
Score = 55.8 bits (133), Expect = 1e-07
Identities = 97/391 (24%), Positives = 131/391 (33%), Gaps = 73/391 (18%)
Query: 306 GSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQ---PRSVEPQDAGPLERSQ 362
G+R ++EE GD A G E + EG Q P++ +P A + Q
Sbjct: 192 GARILDEEVFEGDVQELAIVPGVQAAYESCEQKELECEGGQRERPQNQQPHRAQRSPQQQ 251
Query: 363 GDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEP---------GPQSASEVEKIALN 413
P+ P ++ ++ L PP E G + V + +
Sbjct: 252 PSRLHRPQNQEPQSQDPTPGEEEEI-LESSLLPPLEEAAHGPRGLKGEKGEPAVLEPGML 310
Query: 414 LEGCALSQGSLRT-GTQEVGGQ-----DPGEAVQPCRQPLGAR------VADKVRKRRKV 461
+EG +G G + G DPGE P R L + +
Sbjct: 311 VEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRF 370
Query: 462 DEGAGDSA-AVASGGAQT--------LALAGSPAPSGHPKAGHSENGVEEDTEGRTGP-- 510
G GD VA+ AQ LAL G P P G+ GR GP
Sbjct: 371 GSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYT--------------GRPGPLG 416
Query: 511 KEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG------- 563
+ G+PG E+ P GP G + P G R G AG + A PG
Sbjct: 417 QPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRR--GRAGADGARGMPGDPGVKGDRGF 474
Query: 564 ------PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAES 617
P G GD A+ PG G D+ P PG +GP G +
Sbjct: 475 DGLPGLPGEKGHRGDTGAQGLPGPPGED--GERGDDGEIGPRGLPG--ESGPRGLLGPKG 530
Query: 618 PSETPGPRPA----GPAGDEPAESPSETPGP 644
P PGP GP G + + P PGP
Sbjct: 531 PPGIPGPPGVRGMDGPQGPKGSLGPQGEPGP 561
Score = 50.4 bits (119), Expect = 5e-06
Identities = 53/184 (28%), Positives = 65/184 (35%), Gaps = 16/184 (8%)
Query: 473 SGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE--TPG----PSP 526
SG L G P G P + + +G GP +G PG P + TPG P P
Sbjct: 520 SGPRGLLGPKGPPGIPGPPGVRGMDG--PQGPKGSLGP-QGEPGPPGQQGTPGTQGLPGP 576
Query: 527 AGPAGDEPAESPSETPG----PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSET 581
G G + P PG P GP G E P T G + P+GP G P
Sbjct: 577 QGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGV 636
Query: 582 PGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSE 640
G + E E P G G + PG R GP G + P+
Sbjct: 637 KGVDGIRGLKGHKGEK-GEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTG 695
Query: 641 TPGP 644
PGP
Sbjct: 696 DPGP 699
Score = 43.1 bits (100), Expect = 8e-04
Identities = 110/436 (25%), Positives = 128/436 (29%), Gaps = 133/436 (30%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDR 373
G PGDP + + G R D G Q P + G E G GE
Sbjct: 461 GMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG--------ERGDDGEIG 512
Query: 374 PEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGG 433
P L P ES R L + PP PGP ++G +GSL G Q G
Sbjct: 513 PRGL-PGESGPRGL--LGPKGPPGIPGPPGVR-------GMDGPQGPKGSL--GPQGEPG 560
Query: 434 QDPGEAVQPCRQPLGARVADKVRKRRKVDEGA-GDSAAVASGGAQTL-ALAGSPAPSGHP 491
PG+ P Q L +GA G G L + GS P GHP
Sbjct: 561 P-PGQQGTPGTQGLPG------------PQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHP 607
Query: 492 KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPA---- 547
KEG PG+ P GP G PGPR
Sbjct: 608 G------------------KEGPPGTKGNQGPSGPQGPLG---------YPGPRGVKGVD 640
Query: 548 ---------------------GPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPS 585
G G + PG R GP G + P+ PGP
Sbjct: 641 GIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPP 700
Query: 586 --------------PAGPTRDEPAES--------PSETPGPR----PAGPAGDEPAESPS 619
P P R P S S G R +GP G+ P
Sbjct: 701 GLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPR 760
Query: 620 ETPGPR----------------PAGPAGDEPAESPSETPG-PSPAGPTRDEPAKAGEAAE 662
GPR P GP G+ P G P P GP P K G
Sbjct: 761 GQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPP-GPPGKDGLPGH 819
Query: 663 L-QDAEVESSAKSGKP 677
Q EV K+G P
Sbjct: 820 PGQRGEVGFQGKTGPP 835
Score = 38.1 bits (87), Expect = 0.027
Identities = 34/119 (28%), Positives = 41/119 (34%), Gaps = 3/119 (2%)
Query: 540 ETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPS 599
E P + A P + PS P+ P +P E S P +E A P
Sbjct: 234 ERPQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPR 293
Query: 600 ETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAG 658
G + PA EP PGP GPAG PGP R P +AG
Sbjct: 294 GLKGEK-GEPAVLEPGMLVEGPPGPE--GPAGLIGPPGIQGNPGPVGDPGERGPPGRAG 349
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 82.4 bits (202), Expect = 1e-15
Identities = 114/436 (26%), Positives = 151/436 (34%), Gaps = 65/436 (14%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDH--EASTQGRTCGPEHSKG-----GGRVDEGPQPRS 349
P+ P P ++G PG P E QG+T GP G G + GP
Sbjct: 777 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKT-GPPGPPGVVGPQGAAGETGPMGER 835
Query: 350 VEPQDAGP-----------LERSQGDEA--GGHGEDRPEPLSPKESKKRKLE------LS 390
P GP E ++GD G G+D P L ++ L
Sbjct: 836 GHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLK 895
Query: 391 RREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGAR 450
E P PGP + S E+ A G G R G Q G + V + P+G
Sbjct: 896 GNEGPSGPPGP-AGSPGERGAAGSGGPIGPPG--RPGPQGPPGAAGEKGVPGEKGPIGPT 952
Query: 451 VADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGP 510
D V+ + AG G + G P G K E+G G GP
Sbjct: 953 GRDGVQGPVGLPGPAGPPGVAGEDGDK--GEVGDPGQKG-TKGNKGEHG-PPGPPGPIGP 1008
Query: 511 KEGTPGSPSETPGPSPAGPAGDEPAESPSETPG-------------PRPAGPAGDEPAES 557
G PG+ P GP G A+ T G P P+G G+
Sbjct: 1009 V-GQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVG 1067
Query: 558 PSETPGPR-PAGPAGDEPAESPSETPGP-SPAGPTRDEPAESPSETPG----PRPAGPAG 611
P PGP P GPAG A+ P PG GP ++ S +PG P GP G
Sbjct: 1068 PMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRG 1127
Query: 612 DEPAESPSETPG----PRPAGPAGDE-------PAESPSETPGPSPAGPTRDEPAKAGEA 660
+ + S PG P P GP GD+ P P + P GP + AK
Sbjct: 1128 ERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRG 1187
Query: 661 AELQDAEVESSAKSGK 676
+ + + S +G+
Sbjct: 1188 EDGEPGQPGSPGPTGE 1203
Score = 82.4 bits (202), Expect = 1e-15
Identities = 119/427 (27%), Positives = 146/427 (34%), Gaps = 79/427 (18%)
Query: 312 EEGSPGDPDHEASTQGR--TCGPEHSKGGGRVDEGPQPRSVEPQDAG----PLERSQGDE 365
E G PG P QG T G E +KG D GP + AG P ER
Sbjct: 834 ERGHPGPPGPPGE-QGLPGTAGKEGTKG----DPGPPGAPGKDGPAGLRGFPGERGLPGT 888
Query: 366 AGGHG----EDRPEPLSPKESKKRKLELSRREQ--PPTEPGPQ----SASEV----EKIA 411
AGG G E P P S + PP PGPQ +A E EK
Sbjct: 889 AGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGP 948
Query: 412 LNLEGCALSQGSLR----TGTQEVGGQD--PGEAVQPCRQPLGARVADKVRKRRKVDEGA 465
+ G QG + G V G+D GE P K K K + G
Sbjct: 949 IGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDP---------GQKGTKGNKGEHGP 999
Query: 466 GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK-----EGTPG---- 516
Q A P GH +E T G GP +G PG
Sbjct: 1000 PGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGE 1059
Query: 517 -------SPSETPGP-SPAGPAGDEPAESPSETPGP-RPAGPAGDEPAESPSETPG---- 563
P PGP P GPAG A+ P PG GP G++ S +PG
Sbjct: 1060 KGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGE 1119
Query: 564 PRPAGPAGDEPAESPSETPG----PSPAGPTRDE-------PAESPSETPGPRPAGPAGD 612
P GP G+ + S PG P P GPT D+ P P + P GP G
Sbjct: 1120 PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQ 1179
Query: 613 EPAESPSETPG----PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEV 668
+ A+ G P GP G+ P G PAG E + G+ A+ +
Sbjct: 1180 DGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRG--PAGSPGSEGRQGGKGAKGDPGAI 1237
Query: 669 ESSAKSG 675
+ K+G
Sbjct: 1238 GAPGKTG 1244
Score = 69.3 bits (168), Expect = 1e-11
Identities = 95/324 (29%), Positives = 117/324 (36%), Gaps = 55/324 (16%)
Query: 359 ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSA-SEVEKIAL-NLEG 416
+R + G GED PE PK R P +PGP E K+ + L G
Sbjct: 648 DRGEVGVPGSRGEDGPE--GPKG----------RTGPTGDPGPPGLMGEKGKLGVPGLPG 695
Query: 417 CALSQGSLRT----GTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVA 472
QG + G G+ + P G R R +R G A
Sbjct: 696 YPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQR------GPRGATG 749
Query: 473 SGGAQTLALAGSPAPSGHPKAGHSENGVE--EDTEGRTGPKEGTPGSPSETPGPSPAGPA 530
GA+ +G P G P E G+ + G GPK G PG P + P G
Sbjct: 750 KSGAK--GTSGGDGPHGPP----GERGLPGPQGPNGFPGPK-GPPGPPGKDGLPGHPGQR 802
Query: 531 GDEPAESPSETPGPRPA-GPAGDEPAESPSETPG-PRPAGPAGDEPA------ESPSETP 582
G+ + + PGP GP G P G P P GP G++ E P
Sbjct: 803 GEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDP 862
Query: 583 GPSPAGPTRDEPAES---PSETPGPRPAGPAGDEPAESPSETPGPRPA----GPAGDEPA 635
GP P P +D PA P E P AG G + E PS PGP + G AG
Sbjct: 863 GP-PGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGP 921
Query: 636 ESPSETPGPSPAGPTRDEPAKAGE 659
P PGP GP P AGE
Sbjct: 922 IGPPGRPGPQ--GP----PGAAGE 939
Score = 62.8 bits (151), Expect = 1e-09
Identities = 93/363 (25%), Positives = 119/363 (32%), Gaps = 75/363 (20%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPL-ERSQGDEAGGHG-E 371
G PG P GP G D GPQ + GP E+ + E+G G +
Sbjct: 1070 GPPGPP-----------GPRGPAGPNGAD-GPQGPPGGVGNLGPPGEKGEPGESGSPGIQ 1117
Query: 372 DRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEV 431
P P+ + K E + P EPGP +G G
Sbjct: 1118 GEPGVKGPRGERGEKGESGQ----PGEPGPPGP----------KGPTGDDGPKGNPGPVG 1163
Query: 432 GGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHP 491
DPG + G R D + R D G + G G P P G
Sbjct: 1164 FPGDPGPPGEG-----GPRGQDGAKGDRGEDGEPGQPGSPGPTGEN-----GPPGPLG-- 1211
Query: 492 KAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPG------ 543
K G + + E +G G K G G+P +T PAGPAG + PG
Sbjct: 1212 KRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1271
Query: 544 -PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-------PSPAGPTRDEPA 595
P G AG P PG R GD A+ PG P G D
Sbjct: 1272 RPGATGQAGPPGPVGPPGLPGLR-----GDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGL 1326
Query: 596 ESPSETPGPR----------PAGPAGDEPAESPSETPGPR----PAGPAGDEPAESPSET 641
P +PG + P GP G P+ G + P GP G++ + P
Sbjct: 1327 PGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGH 1386
Query: 642 PGP 644
PGP
Sbjct: 1387 PGP 1389
Score = 60.5 bits (145), Expect = 5e-09
Identities = 96/384 (25%), Positives = 128/384 (33%), Gaps = 80/384 (20%)
Query: 306 GSRKVEEEGSPGDPDHEASTQG-----RTCGPEHSKGGGRVDEGPQPRSVEPQDAGP--- 357
G+R ++EE GD A G +C + + G E PQ + P
Sbjct: 192 GARILDEEVFEGDVQELAIVPGVQAAYESCEQKELECEGGQRERPQNQQPHRAQRSPQQQ 251
Query: 358 ---LERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNL 414
L R Q E P L ++ + LE + P PGP+ + +
Sbjct: 252 PSRLHRPQNQEPQSQAAHGPRGLKGEKGEPAVLEPGMLVEGP--PGPEGPAGL------- 302
Query: 415 EGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGAR------VADKVRKRRKVDEGAGDS 468
+ ++ VG DPGE P R L + + G GD
Sbjct: 303 ----IGPPGIQGNPGPVG--DPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDK 356
Query: 469 A-AVASGGAQT--------LALAGSPAPSGHPKAGHSENGVEEDTEGRTGP--KEGTPGS 517
VA+ AQ LAL G P P G+ GR GP + G+PG
Sbjct: 357 GPVVAAQEAQAQAILQQARLALRGPPGPMGYT--------------GRPGPLGQPGSPGL 402
Query: 518 PSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-------------P 564
E+ P GP G + P G R G AG + A PG P
Sbjct: 403 KGESGDLGPQGPRGPQGLTGPPGKAGRR--GRAGADGARGMPGDPGVKGDRGFDGLPGLP 460
Query: 565 RPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGP 624
G GD A+ PG G D+ P PG +GP G + P PGP
Sbjct: 461 GEKGHRGDTGAQGLPGPPGED--GERGDDGEIGPRGLPG--ESGPRGLLGPKGPPGIPGP 516
Query: 625 RPA----GPAGDEPAESPSETPGP 644
GP G + + P PGP
Sbjct: 517 PGVRGMDGPQGPKGSLGPQGEPGP 540
Score = 50.4 bits (119), Expect = 5e-06
Identities = 53/184 (28%), Positives = 65/184 (35%), Gaps = 16/184 (8%)
Query: 473 SGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE--TPG----PSP 526
SG L G P G P + + +G GP +G PG P + TPG P P
Sbjct: 499 SGPRGLLGPKGPPGIPGPPGVRGMDG--PQGPKGSLGP-QGEPGPPGQQGTPGTQGLPGP 555
Query: 527 AGPAGDEPAESPSETPG----PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSET 581
G G + P PG P GP G E P T G + P+GP G P
Sbjct: 556 QGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGV 615
Query: 582 PGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSE 640
G + E E P G G + PG R GP G + P+
Sbjct: 616 KGVDGIRGLKGHKGEK-GEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTG 674
Query: 641 TPGP 644
PGP
Sbjct: 675 DPGP 678
Score = 43.1 bits (100), Expect = 8e-04
Identities = 110/436 (25%), Positives = 128/436 (29%), Gaps = 133/436 (30%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDR 373
G PGDP + + G R D G Q P + G E G GE
Sbjct: 440 GMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG--------ERGDDGEIG 491
Query: 374 PEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGG 433
P L P ES R L + PP PGP ++G +GSL G Q G
Sbjct: 492 PRGL-PGESGPRGL--LGPKGPPGIPGPPGVR-------GMDGPQGPKGSL--GPQGEPG 539
Query: 434 QDPGEAVQPCRQPLGARVADKVRKRRKVDEGA-GDSAAVASGGAQTL-ALAGSPAPSGHP 491
PG+ P Q L +GA G G L + GS P GHP
Sbjct: 540 P-PGQQGTPGTQGLPG------------PQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHP 586
Query: 492 KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPA---- 547
KEG PG+ P GP G PGPR
Sbjct: 587 G------------------KEGPPGTKGNQGPSGPQGPLG---------YPGPRGVKGVD 619
Query: 548 ---------------------GPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPS 585
G G + PG R GP G + P+ PGP
Sbjct: 620 GIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPP 679
Query: 586 --------------PAGPTRDEPAES--------PSETPGPR----PAGPAGDEPAESPS 619
P P R P S S G R +GP G+ P
Sbjct: 680 GLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPR 739
Query: 620 ETPGPR----------------PAGPAGDEPAESPSETPG-PSPAGPTRDEPAKAGEAAE 662
GPR P GP G+ P G P P GP P K G
Sbjct: 740 GQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPP-GPPGKDGLPGH 798
Query: 663 L-QDAEVESSAKSGKP 677
Q EV K+G P
Sbjct: 799 PGQRGEVGFQGKTGPP 814
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 82.4 bits (202), Expect = 1e-15
Identities = 114/436 (26%), Positives = 151/436 (34%), Gaps = 65/436 (14%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDH--EASTQGRTCGPEHSKG-----GGRVDEGPQPRS 349
P+ P P ++G PG P E QG+T GP G G + GP
Sbjct: 884 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKT-GPPGPPGVVGPQGAAGETGPMGER 942
Query: 350 VEPQDAGP-----------LERSQGDEA--GGHGEDRPEPLSPKESKKRKLE------LS 390
P GP E ++GD G G+D P L ++ L
Sbjct: 943 GHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLK 1002
Query: 391 RREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGAR 450
E P PGP + S E+ A G G R G Q G + V + P+G
Sbjct: 1003 GNEGPSGPPGP-AGSPGERGAAGSGGPIGPPG--RPGPQGPPGAAGEKGVPGEKGPIGPT 1059
Query: 451 VADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGP 510
D V+ + AG G + G P G K E+G G GP
Sbjct: 1060 GRDGVQGPVGLPGPAGPPGVAGEDGDK--GEVGDPGQKG-TKGNKGEHG-PPGPPGPIGP 1115
Query: 511 KEGTPGSPSETPGPSPAGPAGDEPAESPSETPG-------------PRPAGPAGDEPAES 557
G PG+ P GP G A+ T G P P+G G+
Sbjct: 1116 V-GQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVG 1174
Query: 558 PSETPGPR-PAGPAGDEPAESPSETPGP-SPAGPTRDEPAESPSETPG----PRPAGPAG 611
P PGP P GPAG A+ P PG GP ++ S +PG P GP G
Sbjct: 1175 PMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRG 1234
Query: 612 DEPAESPSETPG----PRPAGPAGDE-------PAESPSETPGPSPAGPTRDEPAKAGEA 660
+ + S PG P P GP GD+ P P + P GP + AK
Sbjct: 1235 ERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRG 1294
Query: 661 AELQDAEVESSAKSGK 676
+ + + S +G+
Sbjct: 1295 EDGEPGQPGSPGPTGE 1310
Score = 82.4 bits (202), Expect = 1e-15
Identities = 119/427 (27%), Positives = 146/427 (34%), Gaps = 79/427 (18%)
Query: 312 EEGSPGDPDHEASTQGR--TCGPEHSKGGGRVDEGPQPRSVEPQDAG----PLERSQGDE 365
E G PG P QG T G E +KG D GP + AG P ER
Sbjct: 941 ERGHPGPPGPPGE-QGLPGTAGKEGTKG----DPGPPGAPGKDGPAGLRGFPGERGLPGT 995
Query: 366 AGGHG----EDRPEPLSPKESKKRKLELSRREQ--PPTEPGPQ----SASEV----EKIA 411
AGG G E P P S + PP PGPQ +A E EK
Sbjct: 996 AGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGP 1055
Query: 412 LNLEGCALSQGSLR----TGTQEVGGQD--PGEAVQPCRQPLGARVADKVRKRRKVDEGA 465
+ G QG + G V G+D GE P K K K + G
Sbjct: 1056 IGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDP---------GQKGTKGNKGEHGP 1106
Query: 466 GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK-----EGTPG---- 516
Q A P GH +E T G GP +G PG
Sbjct: 1107 PGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGE 1166
Query: 517 -------SPSETPGP-SPAGPAGDEPAESPSETPGP-RPAGPAGDEPAESPSETPG---- 563
P PGP P GPAG A+ P PG GP G++ S +PG
Sbjct: 1167 KGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGE 1226
Query: 564 PRPAGPAGDEPAESPSETPG----PSPAGPTRDE-------PAESPSETPGPRPAGPAGD 612
P GP G+ + S PG P P GPT D+ P P + P GP G
Sbjct: 1227 PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQ 1286
Query: 613 EPAESPSETPG----PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEV 668
+ A+ G P GP G+ P G PAG E + G+ A+ +
Sbjct: 1287 DGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRG--PAGSPGSEGRQGGKGAKGDPGAI 1344
Query: 669 ESSAKSG 675
+ K+G
Sbjct: 1345 GAPGKTG 1351
Score = 69.3 bits (168), Expect = 1e-11
Identities = 95/324 (29%), Positives = 117/324 (36%), Gaps = 55/324 (16%)
Query: 359 ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSA-SEVEKIAL-NLEG 416
+R + G GED PE PK R P +PGP E K+ + L G
Sbjct: 755 DRGEVGVPGSRGEDGPE--GPKG----------RTGPTGDPGPPGLMGEKGKLGVPGLPG 802
Query: 417 CALSQGSLRT----GTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVA 472
QG + G G+ + P G R R +R G A
Sbjct: 803 YPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQR------GPRGATG 856
Query: 473 SGGAQTLALAGSPAPSGHPKAGHSENGVE--EDTEGRTGPKEGTPGSPSETPGPSPAGPA 530
GA+ +G P G P E G+ + G GPK G PG P + P G
Sbjct: 857 KSGAK--GTSGGDGPHGPP----GERGLPGPQGPNGFPGPK-GPPGPPGKDGLPGHPGQR 909
Query: 531 GDEPAESPSETPGPRPA-GPAGDEPAESPSETPG-PRPAGPAGDEPA------ESPSETP 582
G+ + + PGP GP G P G P P GP G++ E P
Sbjct: 910 GEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDP 969
Query: 583 GPSPAGPTRDEPAES---PSETPGPRPAGPAGDEPAESPSETPGPRPA----GPAGDEPA 635
GP P P +D PA P E P AG G + E PS PGP + G AG
Sbjct: 970 GP-PGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGP 1028
Query: 636 ESPSETPGPSPAGPTRDEPAKAGE 659
P PGP GP P AGE
Sbjct: 1029 IGPPGRPGPQ--GP----PGAAGE 1046
Score = 62.8 bits (151), Expect = 1e-09
Identities = 93/363 (25%), Positives = 119/363 (32%), Gaps = 75/363 (20%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPL-ERSQGDEAGGHG-E 371
G PG P GP G D GPQ + GP E+ + E+G G +
Sbjct: 1177 GPPGPP-----------GPRGPAGPNGAD-GPQGPPGGVGNLGPPGEKGEPGESGSPGIQ 1224
Query: 372 DRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEV 431
P P+ + K E + P EPGP +G G
Sbjct: 1225 GEPGVKGPRGERGEKGESGQ----PGEPGPPGP----------KGPTGDDGPKGNPGPVG 1270
Query: 432 GGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHP 491
DPG + G R D + R D G + G G P P G
Sbjct: 1271 FPGDPGPPGEG-----GPRGQDGAKGDRGEDGEPGQPGSPGPTGEN-----GPPGPLG-- 1318
Query: 492 KAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPG------ 543
K G + + E +G G K G G+P +T PAGPAG + PG
Sbjct: 1319 KRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1378
Query: 544 -PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-------PSPAGPTRDEPA 595
P G AG P PG R GD A+ PG P G D
Sbjct: 1379 RPGATGQAGPPGPVGPPGLPGLR-----GDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGL 1433
Query: 596 ESPSETPGPR----------PAGPAGDEPAESPSETPGPR----PAGPAGDEPAESPSET 641
P +PG + P GP G P+ G + P GP G++ + P
Sbjct: 1434 PGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGH 1493
Query: 642 PGP 644
PGP
Sbjct: 1494 PGP 1496
Score = 57.4 bits (137), Expect = 4e-08
Identities = 108/407 (26%), Positives = 138/407 (33%), Gaps = 70/407 (17%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGP-QPRSVEPQDAGP--LERSQGDEA---- 366
G PG+ H T + + G R D+G PR + P ++GP L +G
Sbjct: 565 GLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGL-PGESGPRGLLGPKGPPGIPGP 623
Query: 367 -GGHGEDRPEPLSPKESKKRKLELSRREQPPTE-----PGPQSA-----SEVEKIALNLE 415
G G D P+ PK S + E Q T PGPQ A + + L
Sbjct: 624 PGVRGMDGPQ--GPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLP 681
Query: 416 GCALSQGSLRTGTQE-----VGGQDPGEAVQPCRQ--PLGARVADKVR--KRRKVDEGAG 466
G S G +E G Q P P P G + D +R K K ++G
Sbjct: 682 GMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGED 741
Query: 467 DSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGP--------------KE 512
G + + G G P E+G E +GRTGP K
Sbjct: 742 G----FPGFKGDIGVKGDRGEVGVP-GSRGEDG-PEGPKGRTGPTGDPGPPGLMGEKGKL 795
Query: 513 GTPGSPSETPGPSPAGPAGDEPAESPSETPGPR----PAGPAGDEPAESPSETPGPRPA- 567
G PG P P G G S G R +GP G+ P GPR A
Sbjct: 796 GVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGAT 855
Query: 568 -------GPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPG----PRPAGPAGDEPAE 616
GD P P E P P GP + P PG P G G+ +
Sbjct: 856 GKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQ 915
Query: 617 SPSETPG-PRPAGPAGDEPAESP-SETPGPSPAGPTRDE--PAKAGE 659
+ PG P GP G P E P P GP ++ P AG+
Sbjct: 916 GKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGK 962
Score = 57.0 bits (136), Expect = 6e-08
Identities = 92/363 (25%), Positives = 124/363 (34%), Gaps = 81/363 (22%)
Query: 325 TQGRTCGPEHSKGGGRVDEGPQPRSV-------EPQDAGPLERSQGDEAGG--HGEDRPE 375
T R E+ +GG EGP + E + GP ++ +G HG P
Sbjct: 323 TADRFQAEEYGEGGTDPPEGPYDYTYGYGDDYREETELGPALSAETAHSGAAAHG---PR 379
Query: 376 PLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQD 435
L ++ + LE + P PGP+ + + + ++ VG D
Sbjct: 380 GLKGEKGEPAVLEPGMLVEGP--PGPEGPAGL-----------IGPPGIQGNPGPVG--D 424
Query: 436 PGEAVQPCRQPLGAR------VADKVRKRRKVDEGAGDSA-AVASGGAQT--------LA 480
PGE P R L + + G GD VA+ AQ LA
Sbjct: 425 PGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLA 484
Query: 481 LAGSPAPSGHPKAGHSENGVEEDTEGRTGP--KEGTPGSPSETPGPSPAGPAGDEPAESP 538
L G P P G+ GR GP + G+PG E+ P GP G + P
Sbjct: 485 LRGPPGPMGYT--------------GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 530
Query: 539 SETPGPRPAGPAGDEPAESPSETPG-------------PRPAGPAGDEPAESPSETPGPS 585
G R G AG + A PG P G GD A+ PG
Sbjct: 531 PGKAGRR--GRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGED 588
Query: 586 PAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA----GPAGDEPAESPSET 641
G D+ P PG +GP G + P PGP GP G + + P
Sbjct: 589 --GERGDDGEIGPRGLPG--ESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGE 644
Query: 642 PGP 644
PGP
Sbjct: 645 PGP 647
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 80.9 bits (198), Expect = 4e-15
Identities = 80/265 (30%), Positives = 89/265 (33%), Gaps = 48/265 (18%)
Query: 453 DKVRKRRKVDEGAGDSAAVASGGAQTLALAG-------SPAPSGHPKAGHSENGVEEDTE 505
D V+ VD+G AV SG A L A P P PK E G E
Sbjct: 1208 DSVQTFFAVDDGPSLDQAV-SGLATALCQASFTTQPRPEPCPVYCPKGQKGEPG-EMGLR 1265
Query: 506 GRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPG-------PRPAGPAGDEPAESP 558
G+ GP G PG P T P P GP G A+ PG P AG G A
Sbjct: 1266 GQVGPP-GDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGL 1324
Query: 559 SETPG-PRPAGPAGDEPAESPSETPG-------------------------PSPAGPTRD 592
+PG P P G G+ P PG P P GP D
Sbjct: 1325 KGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGD 1384
Query: 593 EPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRD 652
P PG G GD P PGP G A EP P P P GP
Sbjct: 1385 PGPRGPPGLPGTAMKGDKGDRGERGP---PGPGEGGIAPGEPG-LPGLPGSPGPQGPV-G 1439
Query: 653 EPAKAGEAAELQDAEVESSAKSGKP 677
P K GE + +D + G P
Sbjct: 1440 PPGKKGEKGDSEDGAPGLPGQPGSP 1464
Score = 73.9 bits (180), Expect = 4e-13
Identities = 65/229 (28%), Positives = 82/229 (35%), Gaps = 36/229 (15%)
Query: 483 GSPAPSGHP-----KAGHSENGVEEDTEGRTGPK-EGTPGSPSETPGPSPAGPAGDEPAE 536
G P P G P + E G G GP G G P + P P GP GD
Sbjct: 1329 GLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPR 1388
Query: 537 SPSETPGPRPAGPAGDE-------PAE---SPSE--------TPGPR-PAGPAGDEPAES 577
P PG G GD P E +P E +PGP+ P GP G + +
Sbjct: 1389 GPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKG 1448
Query: 578 PSETPGPSPAGPTRDEPAESPSETPG----------PRPAGPAGDEPAESPSETPGPRP- 626
SE P G + P PG P P G AG++ P G R
Sbjct: 1449 DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGL 1508
Query: 627 AGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSG 675
G AG A+ P PGP+ + EP + G+ A + A + G
Sbjct: 1509 PGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKG 1557
Score = 69.7 bits (169), Expect = 8e-12
Identities = 111/419 (26%), Positives = 143/419 (34%), Gaps = 70/419 (16%)
Query: 287 GPQDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEA--STQGR--TCGPEHSKG--GGR 340
GP + P PL + + E G PG GR GPE G G +
Sbjct: 1471 GPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQ 1530
Query: 341 VDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPG 400
++G R +P GP E G G P + + ++ L P +PG
Sbjct: 1531 GEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVL----PGDPG 1586
Query: 401 PQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRK 460
P+ ++ + L G A G +G G DPG P P+G R D K
Sbjct: 1587 PKG-DPGDRGPIGLTGRAGPPGD--SGPPGEKG-DPGRPGPP--GPVGPRGRDG-EVGEK 1639
Query: 461 VDEGA-GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPS 519
DEG GD G + L G+P G G G +G PG
Sbjct: 1640 GDEGPPGDPGLPGKAGER--GLRGAPGVRG--------------PVGEKGD-QGDPGEDG 1682
Query: 520 ETPGPSPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPRPAGPAGDEPAESP 578
P +GP GD P PG GP E E P + P GP GD P
Sbjct: 1683 RNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGE-PGDRGQEGPRGPKGD-----P 1736
Query: 579 SETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPG-------PRPAGPAG 631
P G P PG R GPAG++ P G P AGP+G
Sbjct: 1737 GLPGAPGERGIEGFRGPPGPQGDPGVR--GPAGEKGDRGPPGLDGRSGLDGKPGAAGPSG 1794
Query: 632 DEPAESPSETPG-------------PSPAGPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
A + PG P P+GP P K GE D + + K+G+P
Sbjct: 1795 PNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPP-GLPGKPGE-----DGKPGLNGKNGEP 1847
Score = 65.1 bits (157), Expect = 2e-10
Identities = 109/384 (28%), Positives = 136/384 (35%), Gaps = 48/384 (12%)
Query: 312 EEGSPGDP----------DHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERS 361
+ G PGDP D AS + GP+ +G + GPQ P GP +
Sbjct: 1843 KNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGI-LGPQGPPGLPGPVGPPGQG 1901
Query: 362 QGDEAGGHGE--DRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALN-----L 414
GG G DR E S K + E R +P + P E I + +
Sbjct: 1902 FPGVPGGTGPKGDRGETGS-KGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIV 1960
Query: 415 EGCALSQGSLRTGTQEVGGQ--DPGEAVQPCRQ-PLGARVADKVRKRRKVDEGAGDSAAV 471
E S GS + G D GE P ++ P+G ++ K + D G +
Sbjct: 1961 ETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFP-GERGLKGDRGDPGPQGPPGL 2019
Query: 472 A---SGGAQTLALAGSPAPSGHP----------KAGHSENGVEEDTEGRTGP--KEGTPG 516
A G LAG P G P +AG E +G G ++G PG
Sbjct: 2020 ALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPG 2079
Query: 517 SPSETPGPSPAGP--AGDEPAESPSETPGPRPAGPAGDEPAESPSETP-GPRPA-GPAGD 572
P P P GP + DEP S GP A EP + + P G R G GD
Sbjct: 2080 LPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGD 2139
Query: 573 EPAESPSETPG-PSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPG-PRPAGP 629
P G P G E GPR P GP G P PG PAGP
Sbjct: 2140 RGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGP 2199
Query: 630 AGDEPAE-SPSET--PGPSPAGPT 650
G + P ET PG GPT
Sbjct: 2200 QGPSGLKGEPGETGPPGRGLTGPT 2223
Score = 63.9 bits (154), Expect = 5e-10
Identities = 111/411 (27%), Positives = 134/411 (32%), Gaps = 118/411 (28%)
Query: 312 EEGSPGDPDHEASTQGRTCGPEHSKG-----------GGRVDEGPQPRSVEPQDAGPLER 360
E+G PG P A GP+ KG G + + GP P V P D GP +
Sbjct: 1532 EKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGP-PGLVLPGDPGP-KG 1589
Query: 361 SQGD--------------EAGGHGED----RPEPLSPKESKKRKLELSRR--EQPPTEPG 400
GD ++G GE RP P P + R E+ + E PP +PG
Sbjct: 1590 DPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPG 1649
Query: 401 -PQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQ-DPGEAVQPCRQPLGARVADKVRKR 458
P A E L G +R E G Q DPGE
Sbjct: 1650 LPGKAGE-----RGLRGAP----GVRGPVGEKGDQGDPGE-------------------- 1680
Query: 459 RKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKA------GHSENGVEEDT--EGRTGP 510
D + G + G P P G P G E G D EG GP
Sbjct: 1681 --------DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGP 1732
Query: 511 K--EGTPGSPSETPGPS---PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPR 565
K G PG+P E P GP GD P+ G R GP G + PG
Sbjct: 1733 KGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDR--GPPGLDGRSGLDGKPGA- 1789
Query: 566 PAGPAGDEPAESPSETPG-------------PSPAGP--TRDEPAE-----------SPS 599
AGP+G A + PG P P+GP +P E P
Sbjct: 1790 -AGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPG 1848
Query: 600 ETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-PSPAGP 649
+ G GD A GP+ G G P PG P P GP
Sbjct: 1849 DPGEDGRKGEKGDSGASGREGRDGPK--GERGAPGILGPQGPPGLPGPVGP 1897
Score = 60.8 bits (146), Expect = 4e-09
Identities = 106/390 (27%), Positives = 138/390 (35%), Gaps = 59/390 (15%)
Query: 310 VEEEGSPGDPDHEASTQGRTCGPEHS-KGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGG 368
V E+G GDP + GR P S G R + GP D GP R +G E G
Sbjct: 1669 VGEKGDQGDPGED----GRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKG-EPGD 1723
Query: 369 HGEDRP-----EPLSPKESKKRKLELSRREQPPT-EPGPQ--SASEVEKIALNLEGCALS 420
G++ P +P P +R +E R P +PG + + + ++ L+G +
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1783
Query: 421 QGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTL- 479
G G+A P R L +R + + +G G
Sbjct: 1784 DGKPGAAGPSGPNGAAGKAGDPGRDGLPG-----LRGEQGLPGPSGPPGLPGKPGEDGKP 1838
Query: 480 ALAGSPAPSGHP----KAGHSENGVEEDTEGRTGPK--EGTPG--SPSETPG-PSPAGPA 530
L G G P + G + EGR GPK G PG P PG P P GP
Sbjct: 1839 GLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPP 1898
Query: 531 GDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPS-----ETPGPS 585
G P G P G G+ ++ PG R G G EP P+ ET G
Sbjct: 1899 GQG---FPGVPGGTGPKGDRGETGSKGEQGLPGER--GLRG-EPGSVPNVDRLLETAGIK 1952
Query: 586 PAG-----PTRDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PRPAGPAGDEPAE 636
+ T DE + S P R GP GD + P G P G GD
Sbjct: 1953 ASALREIVETWDESSGSFLPVP-ERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDP 2011
Query: 637 SPSETPG--------PSPAGPTRDEPAKAG 658
P PG P P+G EP K G
Sbjct: 2012 GPQGPPGLALGERGPPGPSG-LAGEPGKPG 2040
Score = 60.8 bits (146), Expect = 4e-09
Identities = 105/401 (26%), Positives = 123/401 (30%), Gaps = 75/401 (18%)
Query: 287 GPQDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQ 346
GP+ K P P P+ G G PG P A GP+ GP
Sbjct: 2162 GPEGKPGLQGPRGPPGPVGG------HGDPGPPG--APGLAGPAGPQ----------GPS 2203
Query: 347 PRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPG-PQSAS 405
EP + GP R G G P P P S P PG P
Sbjct: 2204 GLKGEPGETGPPGRGLTGPTGAVG--LPGPPGP----------SGLVGPQGSPGLPGQVG 2251
Query: 406 EVEKI-ALNLEGCALSQGSLRTGTQEVGGQ-----------DPGEAVQPCRQPLGARVAD 453
E K A +G + G G+ V G +PG P + +G A
Sbjct: 2252 ETGKPGAPGRDGASGKDGD--RGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGA- 2308
Query: 454 KVRKRRKVDEGA-GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKE 512
K ++GA G A G G P P G E+ GR G +
Sbjct: 2309 ------KGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG-----------EKGEAGRAG-EP 2350
Query: 513 GTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PRPAG 568
G PG + P P G GD P P P G GD PG P G
Sbjct: 2351 GDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTG 2410
Query: 569 PAGDEPAESPSETPGPSPAGPTRDEPAESPSETPG-PRPAGPAGDEPAESPSETPG---P 624
P G+ PS G AGP E P PG P GP G + PG P
Sbjct: 2411 PRGEMGQPGPSGERG--LAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLP 2468
Query: 625 RPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQD 665
P G G+ PG P GE E D
Sbjct: 2469 GPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGD 2509
Score = 57.0 bits (136), Expect = 6e-08
Identities = 63/220 (28%), Positives = 78/220 (35%), Gaps = 30/220 (13%)
Query: 483 GSPAPSGH--PKAGHSENGVEEDTEGRTGPK--EGTPGSPSET-----------PGP-SP 526
G P +G PK G++ D G GP+ +G PG P E GP P
Sbjct: 2117 GEPGSNGDQGPKGDRGVPGIKGD-RGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGP 2175
Query: 527 AGPAGDEPAESPSETPG-PRPAGPAGDEPAES-PSETPGPR-----PAGPAGDEPAESPS 579
GP G P PG PAGP G + P ET P P G G PS
Sbjct: 2176 PGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPS 2235
Query: 580 ETPGP--SPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAE 636
GP SP P + P +G GD + +PG P P GP G+
Sbjct: 2236 GLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEP--- 2292
Query: 637 SPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSGK 676
P+ PG + G + K D E AK +
Sbjct: 2293 GPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDR 2332
Score = 54.3 bits (129), Expect = 4e-07
Identities = 98/370 (26%), Positives = 125/370 (33%), Gaps = 74/370 (20%)
Query: 313 EGSPGDPDHEASTQGRTCGPEHSKG--GGRVDEG-PQPRSVEPQDAGPLERSQGDEAGGH 369
+G+ G+P GP+ +G G + D G P PR + P ER G
Sbjct: 2113 KGAKGEPGSNGDQ-----GPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKP 2167
Query: 370 GEDRPE-PLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGT 428
G P P P +PGP A L G A QG +G
Sbjct: 2168 GLQGPRGPPGPVGGHG-------------DPGPPGAP-------GLAGPAGPQGP--SGL 2205
Query: 429 QEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPS 488
+ +PGE P R G A + G S V G+ L G +
Sbjct: 2206 KG----EPGETGPPGRGLTGPTGAVGL------PGPPGPSGLVGPQGSP--GLPGQVGET 2253
Query: 489 GHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR--- 545
G P A + +D + + G+PG P GP G P ++ PG +
Sbjct: 2254 GKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTG-APGQAVVGLPGAKGEK 2312
Query: 546 --PAGPAGD---EP-AESPSETPGPR----PAGPAGD--EPAESPSETPGPSPAGPTRDE 593
P G AGD EP A+ PGPR AG AG+ +P E + P P G D
Sbjct: 2313 GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGED-GQKGAPGPKGFKGDP 2371
Query: 594 PAESPSETPGPRPAGPAGDEPAESPSETPG----PRPAGPAGDEPAESPSETPG------ 643
P P P G GD PG P GP G+ PS G
Sbjct: 2372 GVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPG 2431
Query: 644 ----PSPAGP 649
P P GP
Sbjct: 2432 REGIPGPLGP 2441
Score = 52.0 bits (123), Expect = 2e-06
Identities = 57/198 (28%), Positives = 71/198 (35%), Gaps = 23/198 (11%)
Query: 483 GSPAPSGHPKAGHSENGV----EEDTEGRTGPK-----EGTPGSPSETPGPSPAGPAGDE 533
GSP G P + V +G G K +G G E P G AG +
Sbjct: 2599 GSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHK 2658
Query: 534 PAESPSETPGPRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPG----PSPAG 588
PG +G G E P G GP GD+ + TPG P P+G
Sbjct: 2659 GEMGEPGVPGQ--SGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSG 2716
Query: 589 PTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-PSPA 647
P + GPR GP G + + PG R G G A G P PA
Sbjct: 2717 NDGSAGPPGPPGSVGPR--GPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPA 2774
Query: 648 GPTRDEPAKAGEAAELQD 665
GP ++ GEAA +D
Sbjct: 2775 GPRGEK----GEAALTED 2788
Score = 50.8 bits (120), Expect = 4e-06
Identities = 113/441 (25%), Positives = 138/441 (31%), Gaps = 108/441 (24%)
Query: 312 EEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDE-----A 366
E+G PGD E GP KG + P R +E P QGD A
Sbjct: 1717 EKGEPGDRGQE--------GPRGPKGDPGLPGAPGERGIEGFRGPP--GPQGDPGVRGPA 1766
Query: 367 GGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLR- 425
G G+ P L + L+ P+ P + + L G QG
Sbjct: 1767 GEKGDRGPPGLDGRSG----LDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGP 1822
Query: 426 TGTQEVGGQDPGEAVQPCRQPLGARVADKV---RKRRKVDEGA----------GDSAAVA 472
+G + G+ PGE +P D RK K D GA G+ A
Sbjct: 1823 SGPPGLPGK-PGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPG 1881
Query: 473 SGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPA 530
G Q G P P G P G G TGPK G GS E P G
Sbjct: 1882 ILGPQ--GPPGLPGPVGPPGQGFP------GVPGGTGPKGDRGETGSKGEQGLPGERGLR 1933
Query: 531 GDEPAESPS-----ETPG------------------------PRPAGPAGDEPAESPSET 561
G EP P+ ET G R GP GD + P
Sbjct: 1934 G-EPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGK 1992
Query: 562 PGP----RPAGPAGDEPAESPSETPGPS-----PAGPT--RDEPAE-------------S 597
GP G GD P PG + P GP+ EP +
Sbjct: 1993 EGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVG 2052
Query: 598 PSETPGPR----PAGPAGDEPAESPSETPG-PRPAGPAG-----DEPAESPSETPGPSPA 647
+ PG R G G++ + P PG P P GP G DEP S GP
Sbjct: 2053 EAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGL 2112
Query: 648 GPTRDEPAKAGEAAELQDAEV 668
+ EP G+ D V
Sbjct: 2113 KGAKGEPGSNGDQGPKGDRGV 2133
Score = 38.1 bits (87), Expect = 0.027
Identities = 40/143 (27%), Positives = 50/143 (34%), Gaps = 8/143 (5%)
Query: 435 DPGEAVQPCRQPLGARVADKVRKRRKVDEGA-GDSAAVASGGAQTLALAGSPAPSGHPKA 493
D GEA P R L + GA G + G + G P P G +
Sbjct: 2642 DKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDR--GFDGQPGPKGD-QG 2698
Query: 494 GHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAG 551
E G G GP +G+ G P P GP G + + PG R G G
Sbjct: 2699 EKGERGTP-GIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPG 2757
Query: 552 DEPAESPSETPG-PRPAGPAGDE 573
A G P PAGP G++
Sbjct: 2758 VPGAPGERGEQGRPGPAGPRGEK 2780
Score = 32.0 bits (71), Expect = 1.9
Identities = 58/246 (23%), Positives = 80/246 (32%), Gaps = 50/246 (20%)
Query: 312 EEGSPGDPDHEASTQ----GRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAG 367
++GS G+P + S GP+ G + P +D P R + + G
Sbjct: 2561 DKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPG---KDGVPGIRGEKGDVG 2617
Query: 368 GHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTG 427
G P L + K L + E GP G A +G + G
Sbjct: 2618 FMG---PRGLKGERGVKGACGLDGEKGDKGEAGPPGRP----------GLAGHKGEM--G 2662
Query: 428 TQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAP 487
V GQ + P G R D + K D+G G T + G P P
Sbjct: 2663 EPGVPGQSGAPGKEGLIGPKGDRGFDG-QPGPKGDQGE-------KGERGTPGIGGFPGP 2714
Query: 488 SGH--------PKAGHSENGVE--EDTEGRTGPK----------EGTPGSPSETPGPSPA 527
SG+ P G E + +G GP G PG E P PA
Sbjct: 2715 SGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPA 2774
Query: 528 GPAGDE 533
GP G++
Sbjct: 2775 GPRGEK 2780
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 79.7 bits (195), Expect = 8e-15
Identities = 112/381 (29%), Positives = 139/381 (36%), Gaps = 63/381 (16%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDHEAST--QGRTCGPEHSKGGGRVDEGPQPRSVEPQD 354
P P P ++G PG P T QG+T P G G V GPQ + E
Sbjct: 938 PVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPP----GPGGV-VGPQGPTGE--- 989
Query: 355 AGPL-ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALN 413
GP+ ER G GE + KE K +PGPQ S + A
Sbjct: 990 TGPIGERGHPGPPGPPGEQGLPGAAGKEGAKG------------DPGPQGISGKDGPA-G 1036
Query: 414 LEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVAS 473
L G +G G Q G GE Q P+G+ G SA
Sbjct: 1037 LRGFPGERGL--PGAQGAPGLKGGEGPQGPPGPVGS-------------PGERGSA---- 1077
Query: 474 GGAQTLALAGSPAPSGHP-KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS-PAGPAG 531
G A + L G P P G P AG E+ +G G ++G G P PGP+ PAG G
Sbjct: 1078 GTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAG-RDGVQG-PVGLPGPAGPAGSPG 1135
Query: 532 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP----SPA 587
++ + PG + G GD+ P PG + GP G PGP
Sbjct: 1136 EDGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQGMF 1191
Query: 588 GPTRDEPAESPSETPG-------PRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPS 639
G DE A PG P P G G+ P PG P P GP G A+ P
Sbjct: 1192 GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQ 1251
Query: 640 ETPGPSPAGPTRDEPAKAGEA 660
PG + E + GEA
Sbjct: 1252 GPPGSVGSVGGVGEKGEPGEA 1272
Score = 69.7 bits (169), Expect = 8e-12
Identities = 121/422 (28%), Positives = 150/422 (35%), Gaps = 80/422 (18%)
Query: 310 VEEEGSPGDPDHEASTQGR--TCGPEHSKGGGRVDEGPQPRSVEPQDAG----PLER--- 360
+ E G PG P QG G E +KG D GPQ S + AG P ER
Sbjct: 993 IGERGHPGPPGPPGE-QGLPGAAGKEGAKG----DPGPQGISGKDGPAGLRGFPGERGLP 1047
Query: 361 -SQGDEAGGHGEDRPEPLSPKESKKRK--------LELSRREQPPTEPGPQSASEVEKIA 411
+QG GE P P S + + L R P PGP EK A
Sbjct: 1048 GAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAG----EKGA 1103
Query: 412 LNLEGCALSQGSLRTGTQ-EVGGQDP-GEAVQPCRQPLGARVADKVRKRRKVDEGA---- 465
+G G R G Q VG P G A P + + +K K D+G
Sbjct: 1104 PGEKGPQGPAG--RDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP 1161
Query: 466 GDSAAVASGGAQTLALA-GSPAPSGHPKAGHSENGVEEDTEGRTGPK-----EGTPGSPS 519
G GA +A G P P G + G +E G GP +G PG P
Sbjct: 1162 GPPGLQGPVGAPGIAGGDGEPGPRG--QQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPG 1219
Query: 520 ETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP-RPAGPAGDEPAESP 578
E GP G P PGPR GP G A+ P PG G G++
Sbjct: 1220 EKGENGDVGPMG------PPGPPGPR--GPQGPNGADGPQGPPGSVGSVGGVGEKGEPGE 1271
Query: 579 SETPGP-------SPAGPTRDEPAESPSETPGPRPA-GPAGDE-PAESPSETPGPRPAGP 629
+ PGP P G ++ P GP A GP GD+ P +P P GP
Sbjct: 1272 AGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1331
Query: 630 AGDEPAESPSETPG-----------PSPAGPTRD-----EPAKAGE--AAELQDAEVESS 671
G EP + + G P P GP+ + P K G AA + + E
Sbjct: 1332 PG-EPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKG 1390
Query: 672 AK 673
AK
Sbjct: 1391 AK 1392
Score = 69.3 bits (168), Expect = 1e-11
Identities = 98/359 (27%), Positives = 120/359 (33%), Gaps = 77/359 (21%)
Query: 359 ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQS-ASEVEKIAL-NLEG 416
+R + + G GED PE PK R P +PGP A E K+ + L G
Sbjct: 809 DRGEVGQIGPRGEDGPE--GPKG----------RAGPTGDPGPSGQAGEKGKLGVPGLPG 856
Query: 417 CALSQGSLRT----GTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVA 472
QG + G G+ V P G R R R G
Sbjct: 857 YPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKG 916
Query: 473 SGGAQTLALAGSPAPSGH--PKAGHSENGVEEDTEGRTGP--KEGTPGSPSET------- 521
+ G G P P G P+ G +G GP K+G PG P +
Sbjct: 917 TSGGD-----GPPGPPGERGPQGPQGPVGFP-GPKGPPGPPGKDGLPGHPGQRGETGFQG 970
Query: 522 ----PGPS----PAGPAGDEPAESPSETPGPRPAGPAGDEPA------ESPSETPGPRPA 567
PGP P GP G+ PGP GP G++ E PGP+
Sbjct: 971 KTGPPGPGGVVGPQGPTGETGPIGERGHPGP--PGPPGEQGLPGAAGKEGAKGDPGPQGI 1028
Query: 568 ----GPAGDE--PAE--------SPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDE 613
GPAG P E +P G P GP P SP E AGP G
Sbjct: 1029 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPG--PVGSPGERGSAGTAGPIGLP 1086
Query: 614 PAESPSETPGPR----------PAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAE 662
P PGP P GPAG + + P PGP+ + E GE E
Sbjct: 1087 GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1145
Score = 68.2 bits (165), Expect = 2e-11
Identities = 113/424 (26%), Positives = 145/424 (34%), Gaps = 65/424 (15%)
Query: 288 PQDKLRRFK--PSSLPHPL--EGSRKVEEEGSPGDPDHEASTQGR-----TCGPEHSKGG 338
P DK R + P P P +G R + E P EA +G T G G
Sbjct: 621 PGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGM 680
Query: 339 GRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPE-PLSPK-----ESKKRKLELSRR 392
VD P P+ P Q G G P+ P+ P + K L
Sbjct: 681 AGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGA 740
Query: 393 EQPPTEPGPQSASEVEKIALNLEGCALSQGSLR-TGTQEVGGQDPGEAVQPCRQPLGARV 451
+ PP PG + S EK AL G QG + G + V G D ++ + G
Sbjct: 741 DGPPGHPGKEGQSG-EKGALGPPG---PQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDG 796
Query: 452 ADKVRKRRKVDEGAGDSAAVASGGAQ-------TLALAGSPAPSGHPKAGHSEN-GVE-- 501
+ + G+ + G G P PSG +AG GV
Sbjct: 797 FPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG--QAGEKGKLGVPGL 854
Query: 502 EDTEGRTGPKEGT--PGSPSET-----------PGP----SPAGPAGDEPAESPSETPGP 544
GR GPK T PG P PGP P GP G A P+ PGP
Sbjct: 855 PGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGP 914
Query: 545 RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PSPAGPTRDEPAESPSE 600
+ GD P P E P GP G + P PG P G + + +
Sbjct: 915 KGTS-GGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTG 973
Query: 601 TPGP----RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PSPAGPT-R 651
PGP P GP G+ PG P GP G++ + G P P G + +
Sbjct: 974 PPGPGGVVGPQGPTGETGPIGERGHPG--PPGPPGEQGLPGAAGKEGAKGDPGPQGISGK 1031
Query: 652 DEPA 655
D PA
Sbjct: 1032 DGPA 1035
Score = 66.6 bits (161), Expect = 7e-11
Identities = 100/367 (27%), Positives = 128/367 (34%), Gaps = 56/367 (15%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDR 373
GSPG+ D + G G + SKG + P P ++ P AGG GE
Sbjct: 1132 GSPGE-DGDKGEIGEP-GQKGSKGDKGENGPPGPPGLQGPVGAP------GIAGGDGE-- 1181
Query: 374 PEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGG 433
P P + +K + R P PGP + L+G G + +VG
Sbjct: 1182 PGPRGQQGMFGQKGDEGARGFPGP-PGP----------IGLQGLPGPPGE-KGENGDVGP 1229
Query: 434 QDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGH--- 490
P P R P G AD + G V G AG+P P G
Sbjct: 1230 MGPPGPPGP-RGPQGPNGADGPQGP---PGSVGSVGGVGEKGEP--GEAGNPGPPGEAGV 1283
Query: 491 --PKAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRP 546
PK E G E G GP +G PG P P G GD P P P
Sbjct: 1284 GGPKGERGEKG-EAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGD-----PGPPGEPGP 1337
Query: 547 AGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAE--SPSETPG 603
AG G + PG P P GP+G+ P GP A E + E
Sbjct: 1338 AGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGA 1397
Query: 604 PRPAGPAGDEPAESPSETPGPRP----AGPAGDE--PAESPSETPGPSPAGP-----TRD 652
P G G + P+ PGP GP G++ P + + P P P GP +
Sbjct: 1398 EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGP-PGPMGPPGLPGLKG 1456
Query: 653 EPAKAGE 659
+P GE
Sbjct: 1457 DPGSKGE 1463
Score = 65.5 bits (158), Expect = 2e-10
Identities = 61/211 (28%), Positives = 77/211 (36%), Gaps = 28/211 (13%)
Query: 479 LALAGSPAPSGHPKA----GHSENGVEEDTEGRTGP--------KEGTPGSPSETPGPSP 526
+ L G P P G P + G S + + G GP K G PG+ P
Sbjct: 546 MGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGE 605
Query: 527 AGPAGDEPAESPSETPGPR----------PAGPAGDEPAESPSETPGPRPA-GPAGDEPA 575
G GD + PG + P GP GD+ GPR G AG
Sbjct: 606 PGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGL 665
Query: 576 ESPSETPG-PSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPR-PAGPAGD 632
P TPG P G + P GP+ GP G + P PGP+ P GP G+
Sbjct: 666 LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGE 725
Query: 633 E-PAESPSETPGPSPAGPTRDEPAKAGEAAE 662
+ P P P GP P K G++ E
Sbjct: 726 KGPQGKPGLAGLPGADGPP-GHPGKEGQSGE 755
Score = 65.1 bits (157), Expect = 2e-10
Identities = 114/439 (25%), Positives = 145/439 (33%), Gaps = 105/439 (23%)
Query: 312 EEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGE 371
E G PG P + GP + G D P PR + +GDE
Sbjct: 1157 ENGPPGPPGLQ--------GPVGAPGIAGGDGEPGPRGQQGMFG-----QKGDEGARGFP 1203
Query: 372 DRPEPLS------PKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLR 425
P P+ P K ++ PP PGP+ A +G S GS+
Sbjct: 1204 GPPGPIGLQGLPGPPGEKGENGDVGPMG-PPGPPGPRGPQGPNG-ADGPQGPPGSVGSVG 1261
Query: 426 TGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQ-------- 477
G E G +PGEA P P G + R AG A GA+
Sbjct: 1262 -GVGEKG--EPGEAGNP--GPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGP 1316
Query: 478 -----TLALAGSPAPSGHPKAGHSENGV-----EEDTEGRTGP-----KEGTPGSPSETP 522
+ G P P G P ++GV E+ G+ GP + G PG P +
Sbjct: 1317 KGNPGPVGFPGDPGPPGEPGPA-GQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG 1375
Query: 523 GPSPAGPAG---------DEPAESPSETPGP-RPAGPAGDEPAESPSETPGP-------- 564
P AG G + AE P GP P GPAG E PGP
Sbjct: 1376 PPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPG 1435
Query: 565 --------RPAGPAG------DEPAESPSETPG-------PSPAGPTRDEPAESPSETPG 603
P GP G D ++ PG P G D +PG
Sbjct: 1436 AAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG 1495
Query: 604 -------PRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPSPAGPTRDEPA 655
P PAGP G P PG P P GP G++ + P+ G S P
Sbjct: 1496 AKGDGGIPGPAGPLG------PPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1549
Query: 656 KAGEAAELQDAEVESSAKS 674
GE +Q + SS K+
Sbjct: 1550 PPGEV--IQPLPILSSKKT 1566
Score = 61.2 bits (147), Expect = 3e-09
Identities = 95/365 (26%), Positives = 121/365 (33%), Gaps = 81/365 (22%)
Query: 287 GPQDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQ 346
GPQ P P + V E+G PG+ + GP G G GP+
Sbjct: 1240 GPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNP--------GPPGEAGVG----GPK 1287
Query: 347 PRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASE 406
E +AGP AG G P + + PP EPGP
Sbjct: 1288 GERGEKGEAGP-----PGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQ-- 1340
Query: 407 VEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPC----RQPLGARVADKVRKRRKVD 462
+G +G Q GEA P R P GA A+ R+ +
Sbjct: 1341 --------DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEG----RQGE 1388
Query: 463 EGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGP--KEGTPGSPSE 520
+GA A A G G P+G P E G GP ++G PG+ +
Sbjct: 1389 KGAKGEAG-AEGPPGKTGPVGPQGPAGKPGP--------EGLRGIPGPVGEQGLPGAAGQ 1439
Query: 521 TPGPSPAGPAG------DEPAESPSETPG-------PRPAGPAGDEPAESPSETPG---- 563
P P GP G D ++ PG P G GD +PG
Sbjct: 1440 DGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGD 1499
Query: 564 ---PRPAGPAGDEPAESPSETPG-PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPS 619
P PAGP G P PG P P GP ++ + P AG GD P
Sbjct: 1500 GGIPGPAGPLG------PPGPPGLPGPQGPKGNKGSTGP--------AGQKGDSGLPGPP 1545
Query: 620 ETPGP 624
+PGP
Sbjct: 1546 GSPGP 1550
Score = 50.8 bits (120), Expect = 4e-06
Identities = 52/184 (28%), Positives = 62/184 (33%), Gaps = 49/184 (26%)
Query: 513 GTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG--------- 563
G PG T P P G G A+ S PGP+ GP G + P+ PG
Sbjct: 541 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQ--GPRGVQGPPGPTGKPGKRGRPGADG 598
Query: 564 ----PRPAGPAGDEPAESPSETPG----------PSPAGPTRDE--------------PA 595
P G GD + PG P GP D+ P
Sbjct: 599 GRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPG 658
Query: 596 ES-------PSETPG-PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGP-S 645
E+ P TPG P G AG + P GP+ GP G + P PGP
Sbjct: 659 EAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQG 718
Query: 646 PAGP 649
P GP
Sbjct: 719 PIGP 722
Score = 45.1 bits (105), Expect = 2e-04
Identities = 56/192 (29%), Positives = 68/192 (35%), Gaps = 31/192 (16%)
Query: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP 542
G PA + + + +G + + P PG E P P PAGPAG P
Sbjct: 416 GVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGP-PGPAGPAG---IMGPPGLQ 471
Query: 543 GPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAES---PSETPGPSPAGPTRD-EPAESP 598
GP GP GD P PG A P P G GPT + A++
Sbjct: 472 GP--TGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQ 529
Query: 599 SETPGPR-----PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP-------SP 646
+ R P GP G T P P G G A+ S PGP P
Sbjct: 530 AILQQARIALRGPPGPMG--------LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGP 581
Query: 647 AGPTRDEPAKAG 658
GPT +P K G
Sbjct: 582 PGPT-GKPGKRG 592
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 79.7 bits (195), Expect = 8e-15
Identities = 112/381 (29%), Positives = 139/381 (36%), Gaps = 63/381 (16%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDHEAST--QGRTCGPEHSKGGGRVDEGPQPRSVEPQD 354
P P P ++G PG P T QG+T P G G V GPQ + E
Sbjct: 887 PVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPP----GPGGV-VGPQGPTGE--- 938
Query: 355 AGPL-ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALN 413
GP+ ER G GE + KE K +PGPQ S + A
Sbjct: 939 TGPIGERGHPGPPGPPGEQGLPGAAGKEGAKG------------DPGPQGISGKDGPA-G 985
Query: 414 LEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVAS 473
L G +G G Q G GE Q P+G+ G SA
Sbjct: 986 LRGFPGERGL--PGAQGAPGLKGGEGPQGPPGPVGS-------------PGERGSA---- 1026
Query: 474 GGAQTLALAGSPAPSGHP-KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS-PAGPAG 531
G A + L G P P G P AG E+ +G G ++G G P PGP+ PAG G
Sbjct: 1027 GTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAG-RDGVQG-PVGLPGPAGPAGSPG 1084
Query: 532 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP----SPA 587
++ + PG + G GD+ P PG + GP G PGP
Sbjct: 1085 EDGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQGMF 1140
Query: 588 GPTRDEPAESPSETPG-------PRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPS 639
G DE A PG P P G G+ P PG P P GP G A+ P
Sbjct: 1141 GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQ 1200
Query: 640 ETPGPSPAGPTRDEPAKAGEA 660
PG + E + GEA
Sbjct: 1201 GPPGSVGSVGGVGEKGEPGEA 1221
Score = 69.7 bits (169), Expect = 8e-12
Identities = 121/422 (28%), Positives = 150/422 (35%), Gaps = 80/422 (18%)
Query: 310 VEEEGSPGDPDHEASTQGR--TCGPEHSKGGGRVDEGPQPRSVEPQDAG----PLER--- 360
+ E G PG P QG G E +KG D GPQ S + AG P ER
Sbjct: 942 IGERGHPGPPGPPGE-QGLPGAAGKEGAKG----DPGPQGISGKDGPAGLRGFPGERGLP 996
Query: 361 -SQGDEAGGHGEDRPEPLSPKESKKRK--------LELSRREQPPTEPGPQSASEVEKIA 411
+QG GE P P S + + L R P PGP EK A
Sbjct: 997 GAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAG----EKGA 1052
Query: 412 LNLEGCALSQGSLRTGTQ-EVGGQDP-GEAVQPCRQPLGARVADKVRKRRKVDEGA---- 465
+G G R G Q VG P G A P + + +K K D+G
Sbjct: 1053 PGEKGPQGPAG--RDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP 1110
Query: 466 GDSAAVASGGAQTLALA-GSPAPSGHPKAGHSENGVEEDTEGRTGPK-----EGTPGSPS 519
G GA +A G P P G + G +E G GP +G PG P
Sbjct: 1111 GPPGLQGPVGAPGIAGGDGEPGPRG--QQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPG 1168
Query: 520 ETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP-RPAGPAGDEPAESP 578
E GP G P PGPR GP G A+ P PG G G++
Sbjct: 1169 EKGENGDVGPMG------PPGPPGPR--GPQGPNGADGPQGPPGSVGSVGGVGEKGEPGE 1220
Query: 579 SETPGP-------SPAGPTRDEPAESPSETPGPRPA-GPAGDE-PAESPSETPGPRPAGP 629
+ PGP P G ++ P GP A GP GD+ P +P P GP
Sbjct: 1221 AGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1280
Query: 630 AGDEPAESPSETPG-----------PSPAGPTRD-----EPAKAGE--AAELQDAEVESS 671
G EP + + G P P GP+ + P K G AA + + E
Sbjct: 1281 PG-EPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKG 1339
Query: 672 AK 673
AK
Sbjct: 1340 AK 1341
Score = 69.3 bits (168), Expect = 1e-11
Identities = 98/359 (27%), Positives = 120/359 (33%), Gaps = 77/359 (21%)
Query: 359 ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQS-ASEVEKIAL-NLEG 416
+R + + G GED PE PK R P +PGP A E K+ + L G
Sbjct: 758 DRGEVGQIGPRGEDGPE--GPKG----------RAGPTGDPGPSGQAGEKGKLGVPGLPG 805
Query: 417 CALSQGSLRT----GTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVA 472
QG + G G+ V P G R R R G
Sbjct: 806 YPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKG 865
Query: 473 SGGAQTLALAGSPAPSGH--PKAGHSENGVEEDTEGRTGP--KEGTPGSPSET------- 521
+ G G P P G P+ G +G GP K+G PG P +
Sbjct: 866 TSGGD-----GPPGPPGERGPQGPQGPVGFP-GPKGPPGPPGKDGLPGHPGQRGETGFQG 919
Query: 522 ----PGPS----PAGPAGDEPAESPSETPGPRPAGPAGDEPA------ESPSETPGPRPA 567
PGP P GP G+ PGP GP G++ E PGP+
Sbjct: 920 KTGPPGPGGVVGPQGPTGETGPIGERGHPGP--PGPPGEQGLPGAAGKEGAKGDPGPQGI 977
Query: 568 ----GPAGDE--PAE--------SPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDE 613
GPAG P E +P G P GP P SP E AGP G
Sbjct: 978 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPG--PVGSPGERGSAGTAGPIGLP 1035
Query: 614 PAESPSETPGPR----------PAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAE 662
P PGP P GPAG + + P PGP+ + E GE E
Sbjct: 1036 GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1094
Score = 68.2 bits (165), Expect = 2e-11
Identities = 113/424 (26%), Positives = 145/424 (34%), Gaps = 65/424 (15%)
Query: 288 PQDKLRRFK--PSSLPHPL--EGSRKVEEEGSPGDPDHEASTQGR-----TCGPEHSKGG 338
P DK R + P P P +G R + E P EA +G T G G
Sbjct: 570 PGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGM 629
Query: 339 GRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPE-PLSPK-----ESKKRKLELSRR 392
VD P P+ P Q G G P+ P+ P + K L
Sbjct: 630 AGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGA 689
Query: 393 EQPPTEPGPQSASEVEKIALNLEGCALSQGSLR-TGTQEVGGQDPGEAVQPCRQPLGARV 451
+ PP PG + S EK AL G QG + G + V G D ++ + G
Sbjct: 690 DGPPGHPGKEGQSG-EKGALGPPG---PQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDG 745
Query: 452 ADKVRKRRKVDEGAGDSAAVASGGAQ-------TLALAGSPAPSGHPKAGHSEN-GVE-- 501
+ + G+ + G G P PSG +AG GV
Sbjct: 746 FPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG--QAGEKGKLGVPGL 803
Query: 502 EDTEGRTGPKEGT--PGSPSET-----------PGP----SPAGPAGDEPAESPSETPGP 544
GR GPK T PG P PGP P GP G A P+ PGP
Sbjct: 804 PGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGP 863
Query: 545 RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PSPAGPTRDEPAESPSE 600
+ GD P P E P GP G + P PG P G + + +
Sbjct: 864 KGTS-GGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTG 922
Query: 601 TPGP----RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PSPAGPT-R 651
PGP P GP G+ PG P GP G++ + G P P G + +
Sbjct: 923 PPGPGGVVGPQGPTGETGPIGERGHPG--PPGPPGEQGLPGAAGKEGAKGDPGPQGISGK 980
Query: 652 DEPA 655
D PA
Sbjct: 981 DGPA 984
Score = 66.6 bits (161), Expect = 7e-11
Identities = 100/367 (27%), Positives = 128/367 (34%), Gaps = 56/367 (15%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDR 373
GSPG+ D + G G + SKG + P P ++ P AGG GE
Sbjct: 1081 GSPGE-DGDKGEIGEP-GQKGSKGDKGENGPPGPPGLQGPVGAP------GIAGGDGE-- 1130
Query: 374 PEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGG 433
P P + +K + R P PGP + L+G G + +VG
Sbjct: 1131 PGPRGQQGMFGQKGDEGARGFPGP-PGP----------IGLQGLPGPPGE-KGENGDVGP 1178
Query: 434 QDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGH--- 490
P P R P G AD + G V G AG+P P G
Sbjct: 1179 MGPPGPPGP-RGPQGPNGADGPQGP---PGSVGSVGGVGEKGEP--GEAGNPGPPGEAGV 1232
Query: 491 --PKAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRP 546
PK E G E G GP +G PG P P G GD P P P
Sbjct: 1233 GGPKGERGEKG-EAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGD-----PGPPGEPGP 1286
Query: 547 AGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAE--SPSETPG 603
AG G + PG P P GP+G+ P GP A E + E
Sbjct: 1287 AGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGA 1346
Query: 604 PRPAGPAGDEPAESPSETPGPRP----AGPAGDE--PAESPSETPGPSPAGP-----TRD 652
P G G + P+ PGP GP G++ P + + P P P GP +
Sbjct: 1347 EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGP-PGPMGPPGLPGLKG 1405
Query: 653 EPAKAGE 659
+P GE
Sbjct: 1406 DPGSKGE 1412
Score = 65.5 bits (158), Expect = 2e-10
Identities = 61/211 (28%), Positives = 77/211 (36%), Gaps = 28/211 (13%)
Query: 479 LALAGSPAPSGHPKA----GHSENGVEEDTEGRTGP--------KEGTPGSPSETPGPSP 526
+ L G P P G P + G S + + G GP K G PG+ P
Sbjct: 495 MGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGE 554
Query: 527 AGPAGDEPAESPSETPGPR----------PAGPAGDEPAESPSETPGPRPA-GPAGDEPA 575
G GD + PG + P GP GD+ GPR G AG
Sbjct: 555 PGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGL 614
Query: 576 ESPSETPG-PSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPR-PAGPAGD 632
P TPG P G + P GP+ GP G + P PGP+ P GP G+
Sbjct: 615 LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGE 674
Query: 633 E-PAESPSETPGPSPAGPTRDEPAKAGEAAE 662
+ P P P GP P K G++ E
Sbjct: 675 KGPQGKPGLAGLPGADGPP-GHPGKEGQSGE 704
Score = 65.1 bits (157), Expect = 2e-10
Identities = 114/439 (25%), Positives = 145/439 (33%), Gaps = 105/439 (23%)
Query: 312 EEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGE 371
E G PG P + GP + G D P PR + +GDE
Sbjct: 1106 ENGPPGPPGLQ--------GPVGAPGIAGGDGEPGPRGQQGMFG-----QKGDEGARGFP 1152
Query: 372 DRPEPLS------PKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLR 425
P P+ P K ++ PP PGP+ A +G S GS+
Sbjct: 1153 GPPGPIGLQGLPGPPGEKGENGDVGPMG-PPGPPGPRGPQGPNG-ADGPQGPPGSVGSVG 1210
Query: 426 TGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQ-------- 477
G E G +PGEA P P G + R AG A GA+
Sbjct: 1211 -GVGEKG--EPGEAGNP--GPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGP 1265
Query: 478 -----TLALAGSPAPSGHPKAGHSENGV-----EEDTEGRTGP-----KEGTPGSPSETP 522
+ G P P G P ++GV E+ G+ GP + G PG P +
Sbjct: 1266 KGNPGPVGFPGDPGPPGEPGPA-GQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG 1324
Query: 523 GPSPAGPAG---------DEPAESPSETPGP-RPAGPAGDEPAESPSETPGP-------- 564
P AG G + AE P GP P GPAG E PGP
Sbjct: 1325 PPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPG 1384
Query: 565 --------RPAGPAG------DEPAESPSETPG-------PSPAGPTRDEPAESPSETPG 603
P GP G D ++ PG P G D +PG
Sbjct: 1385 AAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG 1444
Query: 604 -------PRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPSPAGPTRDEPA 655
P PAGP G P PG P P GP G++ + P+ G S P
Sbjct: 1445 AKGDGGIPGPAGPLG------PPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1498
Query: 656 KAGEAAELQDAEVESSAKS 674
GE +Q + SS K+
Sbjct: 1499 PPGEV--IQPLPILSSKKT 1515
Score = 61.2 bits (147), Expect = 3e-09
Identities = 95/365 (26%), Positives = 121/365 (33%), Gaps = 81/365 (22%)
Query: 287 GPQDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQ 346
GPQ P P + V E+G PG+ + GP G G GP+
Sbjct: 1189 GPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNP--------GPPGEAGVG----GPK 1236
Query: 347 PRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASE 406
E +AGP AG G P + + PP EPGP
Sbjct: 1237 GERGEKGEAGP-----PGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQ-- 1289
Query: 407 VEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPC----RQPLGARVADKVRKRRKVD 462
+G +G Q GEA P R P GA A+ R+ +
Sbjct: 1290 --------DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEG----RQGE 1337
Query: 463 EGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGP--KEGTPGSPSE 520
+GA A A G G P+G P E G GP ++G PG+ +
Sbjct: 1338 KGAKGEAG-AEGPPGKTGPVGPQGPAGKPGP--------EGLRGIPGPVGEQGLPGAAGQ 1388
Query: 521 TPGPSPAGPAG------DEPAESPSETPG-------PRPAGPAGDEPAESPSETPG---- 563
P P GP G D ++ PG P G GD +PG
Sbjct: 1389 DGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGD 1448
Query: 564 ---PRPAGPAGDEPAESPSETPG-PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPS 619
P PAGP G P PG P P GP ++ + P AG GD P
Sbjct: 1449 GGIPGPAGPLG------PPGPPGLPGPQGPKGNKGSTGP--------AGQKGDSGLPGPP 1494
Query: 620 ETPGP 624
+PGP
Sbjct: 1495 GSPGP 1499
Score = 50.8 bits (120), Expect = 4e-06
Identities = 52/184 (28%), Positives = 62/184 (33%), Gaps = 49/184 (26%)
Query: 513 GTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG--------- 563
G PG T P P G G A+ S PGP+ GP G + P+ PG
Sbjct: 490 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQ--GPRGVQGPPGPTGKPGKRGRPGADG 547
Query: 564 ----PRPAGPAGDEPAESPSETPG----------PSPAGPTRDE--------------PA 595
P G GD + PG P GP D+ P
Sbjct: 548 GRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPG 607
Query: 596 ES-------PSETPG-PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGP-S 645
E+ P TPG P G AG + P GP+ GP G + P PGP
Sbjct: 608 EAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQG 667
Query: 646 PAGP 649
P GP
Sbjct: 668 PIGP 671
Score = 45.1 bits (105), Expect = 2e-04
Identities = 56/192 (29%), Positives = 68/192 (35%), Gaps = 31/192 (16%)
Query: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP 542
G PA + + + +G + + P PG E P P PAGPAG P
Sbjct: 365 GVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGP-PGPAGPAG---IMGPPGLQ 420
Query: 543 GPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAES---PSETPGPSPAGPTRD-EPAESP 598
GP GP GD P PG A P P G GPT + A++
Sbjct: 421 GP--TGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQ 478
Query: 599 SETPGPR-----PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP-------SP 646
+ R P GP G T P P G G A+ S PGP P
Sbjct: 479 AILQQARIALRGPPGPMG--------LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGP 530
Query: 647 AGPTRDEPAKAG 658
GPT +P K G
Sbjct: 531 PGPT-GKPGKRG 541
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 79.7 bits (195), Expect = 8e-15
Identities = 112/381 (29%), Positives = 139/381 (36%), Gaps = 63/381 (16%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDHEAST--QGRTCGPEHSKGGGRVDEGPQPRSVEPQD 354
P P P ++G PG P T QG+T P G G V GPQ + E
Sbjct: 926 PVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPP----GPGGV-VGPQGPTGE--- 977
Query: 355 AGPL-ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALN 413
GP+ ER G GE + KE K +PGPQ S + A
Sbjct: 978 TGPIGERGHPGPPGPPGEQGLPGAAGKEGAKG------------DPGPQGISGKDGPA-G 1024
Query: 414 LEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVAS 473
L G +G G Q G GE Q P+G+ G SA
Sbjct: 1025 LRGFPGERGL--PGAQGAPGLKGGEGPQGPPGPVGS-------------PGERGSA---- 1065
Query: 474 GGAQTLALAGSPAPSGHP-KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS-PAGPAG 531
G A + L G P P G P AG E+ +G G ++G G P PGP+ PAG G
Sbjct: 1066 GTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAG-RDGVQG-PVGLPGPAGPAGSPG 1123
Query: 532 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP----SPA 587
++ + PG + G GD+ P PG + GP G PGP
Sbjct: 1124 EDGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQGMF 1179
Query: 588 GPTRDEPAESPSETPG-------PRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPS 639
G DE A PG P P G G+ P PG P P GP G A+ P
Sbjct: 1180 GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQ 1239
Query: 640 ETPGPSPAGPTRDEPAKAGEA 660
PG + E + GEA
Sbjct: 1240 GPPGSVGSVGGVGEKGEPGEA 1260
Score = 69.7 bits (169), Expect = 8e-12
Identities = 121/422 (28%), Positives = 150/422 (35%), Gaps = 80/422 (18%)
Query: 310 VEEEGSPGDPDHEASTQGR--TCGPEHSKGGGRVDEGPQPRSVEPQDAG----PLER--- 360
+ E G PG P QG G E +KG D GPQ S + AG P ER
Sbjct: 981 IGERGHPGPPGPPGE-QGLPGAAGKEGAKG----DPGPQGISGKDGPAGLRGFPGERGLP 1035
Query: 361 -SQGDEAGGHGEDRPEPLSPKESKKRK--------LELSRREQPPTEPGPQSASEVEKIA 411
+QG GE P P S + + L R P PGP EK A
Sbjct: 1036 GAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAG----EKGA 1091
Query: 412 LNLEGCALSQGSLRTGTQ-EVGGQDP-GEAVQPCRQPLGARVADKVRKRRKVDEGA---- 465
+G G R G Q VG P G A P + + +K K D+G
Sbjct: 1092 PGEKGPQGPAG--RDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP 1149
Query: 466 GDSAAVASGGAQTLALA-GSPAPSGHPKAGHSENGVEEDTEGRTGPK-----EGTPGSPS 519
G GA +A G P P G + G +E G GP +G PG P
Sbjct: 1150 GPPGLQGPVGAPGIAGGDGEPGPRG--QQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPG 1207
Query: 520 ETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP-RPAGPAGDEPAESP 578
E GP G P PGPR GP G A+ P PG G G++
Sbjct: 1208 EKGENGDVGPMG------PPGPPGPR--GPQGPNGADGPQGPPGSVGSVGGVGEKGEPGE 1259
Query: 579 SETPGP-------SPAGPTRDEPAESPSETPGPRPA-GPAGDE-PAESPSETPGPRPAGP 629
+ PGP P G ++ P GP A GP GD+ P +P P GP
Sbjct: 1260 AGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1319
Query: 630 AGDEPAESPSETPG-----------PSPAGPTRD-----EPAKAGE--AAELQDAEVESS 671
G EP + + G P P GP+ + P K G AA + + E
Sbjct: 1320 PG-EPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKG 1378
Query: 672 AK 673
AK
Sbjct: 1379 AK 1380
Score = 69.3 bits (168), Expect = 1e-11
Identities = 98/359 (27%), Positives = 120/359 (33%), Gaps = 77/359 (21%)
Query: 359 ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQS-ASEVEKIAL-NLEG 416
+R + + G GED PE PK R P +PGP A E K+ + L G
Sbjct: 797 DRGEVGQIGPRGEDGPE--GPKG----------RAGPTGDPGPSGQAGEKGKLGVPGLPG 844
Query: 417 CALSQGSLRT----GTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVA 472
QG + G G+ V P G R R R G
Sbjct: 845 YPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKG 904
Query: 473 SGGAQTLALAGSPAPSGH--PKAGHSENGVEEDTEGRTGP--KEGTPGSPSET------- 521
+ G G P P G P+ G +G GP K+G PG P +
Sbjct: 905 TSGGD-----GPPGPPGERGPQGPQGPVGFP-GPKGPPGPPGKDGLPGHPGQRGETGFQG 958
Query: 522 ----PGPS----PAGPAGDEPAESPSETPGPRPAGPAGDEPA------ESPSETPGPRPA 567
PGP P GP G+ PGP GP G++ E PGP+
Sbjct: 959 KTGPPGPGGVVGPQGPTGETGPIGERGHPGP--PGPPGEQGLPGAAGKEGAKGDPGPQGI 1016
Query: 568 ----GPAGDE--PAE--------SPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDE 613
GPAG P E +P G P GP P SP E AGP G
Sbjct: 1017 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPG--PVGSPGERGSAGTAGPIGLP 1074
Query: 614 PAESPSETPGPR----------PAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAE 662
P PGP P GPAG + + P PGP+ + E GE E
Sbjct: 1075 GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1133
Score = 68.2 bits (165), Expect = 2e-11
Identities = 113/424 (26%), Positives = 145/424 (34%), Gaps = 65/424 (15%)
Query: 288 PQDKLRRFK--PSSLPHPL--EGSRKVEEEGSPGDPDHEASTQGR-----TCGPEHSKGG 338
P DK R + P P P +G R + E P EA +G T G G
Sbjct: 609 PGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGM 668
Query: 339 GRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPE-PLSPK-----ESKKRKLELSRR 392
VD P P+ P Q G G P+ P+ P + K L
Sbjct: 669 AGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGA 728
Query: 393 EQPPTEPGPQSASEVEKIALNLEGCALSQGSLR-TGTQEVGGQDPGEAVQPCRQPLGARV 451
+ PP PG + S EK AL G QG + G + V G D ++ + G
Sbjct: 729 DGPPGHPGKEGQSG-EKGALGPPG---PQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDG 784
Query: 452 ADKVRKRRKVDEGAGDSAAVASGGAQ-------TLALAGSPAPSGHPKAGHSEN-GVE-- 501
+ + G+ + G G P PSG +AG GV
Sbjct: 785 FPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG--QAGEKGKLGVPGL 842
Query: 502 EDTEGRTGPKEGT--PGSPSET-----------PGP----SPAGPAGDEPAESPSETPGP 544
GR GPK T PG P PGP P GP G A P+ PGP
Sbjct: 843 PGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGP 902
Query: 545 RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PSPAGPTRDEPAESPSE 600
+ GD P P E P GP G + P PG P G + + +
Sbjct: 903 KGTS-GGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTG 961
Query: 601 TPGP----RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PSPAGPT-R 651
PGP P GP G+ PG P GP G++ + G P P G + +
Sbjct: 962 PPGPGGVVGPQGPTGETGPIGERGHPG--PPGPPGEQGLPGAAGKEGAKGDPGPQGISGK 1019
Query: 652 DEPA 655
D PA
Sbjct: 1020 DGPA 1023
Score = 66.6 bits (161), Expect = 7e-11
Identities = 100/367 (27%), Positives = 128/367 (34%), Gaps = 56/367 (15%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDR 373
GSPG+ D + G G + SKG + P P ++ P AGG GE
Sbjct: 1120 GSPGE-DGDKGEIGEP-GQKGSKGDKGENGPPGPPGLQGPVGAP------GIAGGDGE-- 1169
Query: 374 PEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGG 433
P P + +K + R P PGP + L+G G + +VG
Sbjct: 1170 PGPRGQQGMFGQKGDEGARGFPGP-PGP----------IGLQGLPGPPGE-KGENGDVGP 1217
Query: 434 QDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGH--- 490
P P R P G AD + G V G AG+P P G
Sbjct: 1218 MGPPGPPGP-RGPQGPNGADGPQGP---PGSVGSVGGVGEKGEP--GEAGNPGPPGEAGV 1271
Query: 491 --PKAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRP 546
PK E G E G GP +G PG P P G GD P P P
Sbjct: 1272 GGPKGERGEKG-EAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGD-----PGPPGEPGP 1325
Query: 547 AGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAE--SPSETPG 603
AG G + PG P P GP+G+ P GP A E + E
Sbjct: 1326 AGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGA 1385
Query: 604 PRPAGPAGDEPAESPSETPGPRP----AGPAGDE--PAESPSETPGPSPAGP-----TRD 652
P G G + P+ PGP GP G++ P + + P P P GP +
Sbjct: 1386 EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGP-PGPMGPPGLPGLKG 1444
Query: 653 EPAKAGE 659
+P GE
Sbjct: 1445 DPGSKGE 1451
Score = 65.5 bits (158), Expect = 2e-10
Identities = 61/211 (28%), Positives = 77/211 (36%), Gaps = 28/211 (13%)
Query: 479 LALAGSPAPSGHPKA----GHSENGVEEDTEGRTGP--------KEGTPGSPSETPGPSP 526
+ L G P P G P + G S + + G GP K G PG+ P
Sbjct: 534 MGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGE 593
Query: 527 AGPAGDEPAESPSETPGPR----------PAGPAGDEPAESPSETPGPRPA-GPAGDEPA 575
G GD + PG + P GP GD+ GPR G AG
Sbjct: 594 PGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGL 653
Query: 576 ESPSETPG-PSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPR-PAGPAGD 632
P TPG P G + P GP+ GP G + P PGP+ P GP G+
Sbjct: 654 LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGE 713
Query: 633 E-PAESPSETPGPSPAGPTRDEPAKAGEAAE 662
+ P P P GP P K G++ E
Sbjct: 714 KGPQGKPGLAGLPGADGPP-GHPGKEGQSGE 743
Score = 65.1 bits (157), Expect = 2e-10
Identities = 114/439 (25%), Positives = 145/439 (33%), Gaps = 105/439 (23%)
Query: 312 EEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGE 371
E G PG P + GP + G D P PR + +GDE
Sbjct: 1145 ENGPPGPPGLQ--------GPVGAPGIAGGDGEPGPRGQQGMFG-----QKGDEGARGFP 1191
Query: 372 DRPEPLS------PKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLR 425
P P+ P K ++ PP PGP+ A +G S GS+
Sbjct: 1192 GPPGPIGLQGLPGPPGEKGENGDVGPMG-PPGPPGPRGPQGPNG-ADGPQGPPGSVGSVG 1249
Query: 426 TGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQ-------- 477
G E G +PGEA P P G + R AG A GA+
Sbjct: 1250 -GVGEKG--EPGEAGNP--GPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGP 1304
Query: 478 -----TLALAGSPAPSGHPKAGHSENGV-----EEDTEGRTGP-----KEGTPGSPSETP 522
+ G P P G P ++GV E+ G+ GP + G PG P +
Sbjct: 1305 KGNPGPVGFPGDPGPPGEPGPA-GQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG 1363
Query: 523 GPSPAGPAG---------DEPAESPSETPGP-RPAGPAGDEPAESPSETPGP-------- 564
P AG G + AE P GP P GPAG E PGP
Sbjct: 1364 PPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPG 1423
Query: 565 --------RPAGPAG------DEPAESPSETPG-------PSPAGPTRDEPAESPSETPG 603
P GP G D ++ PG P G D +PG
Sbjct: 1424 AAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG 1483
Query: 604 -------PRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPSPAGPTRDEPA 655
P PAGP G P PG P P GP G++ + P+ G S P
Sbjct: 1484 AKGDGGIPGPAGPLG------PPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1537
Query: 656 KAGEAAELQDAEVESSAKS 674
GE +Q + SS K+
Sbjct: 1538 PPGEV--IQPLPILSSKKT 1554
Score = 61.2 bits (147), Expect = 3e-09
Identities = 95/365 (26%), Positives = 121/365 (33%), Gaps = 81/365 (22%)
Query: 287 GPQDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQ 346
GPQ P P + V E+G PG+ + GP G G GP+
Sbjct: 1228 GPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNP--------GPPGEAGVG----GPK 1275
Query: 347 PRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASE 406
E +AGP AG G P + + PP EPGP
Sbjct: 1276 GERGEKGEAGP-----PGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQ-- 1328
Query: 407 VEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPC----RQPLGARVADKVRKRRKVD 462
+G +G Q GEA P R P GA A+ R+ +
Sbjct: 1329 --------DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEG----RQGE 1376
Query: 463 EGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGP--KEGTPGSPSE 520
+GA A A G G P+G P E G GP ++G PG+ +
Sbjct: 1377 KGAKGEAG-AEGPPGKTGPVGPQGPAGKPGP--------EGLRGIPGPVGEQGLPGAAGQ 1427
Query: 521 TPGPSPAGPAG------DEPAESPSETPG-------PRPAGPAGDEPAESPSETPG---- 563
P P GP G D ++ PG P G GD +PG
Sbjct: 1428 DGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGD 1487
Query: 564 ---PRPAGPAGDEPAESPSETPG-PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPS 619
P PAGP G P PG P P GP ++ + P AG GD P
Sbjct: 1488 GGIPGPAGPLG------PPGPPGLPGPQGPKGNKGSTGP--------AGQKGDSGLPGPP 1533
Query: 620 ETPGP 624
+PGP
Sbjct: 1534 GSPGP 1538
Score = 50.8 bits (120), Expect = 4e-06
Identities = 52/184 (28%), Positives = 62/184 (33%), Gaps = 49/184 (26%)
Query: 513 GTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG--------- 563
G PG T P P G G A+ S PGP+ GP G + P+ PG
Sbjct: 529 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQ--GPRGVQGPPGPTGKPGKRGRPGADG 586
Query: 564 ----PRPAGPAGDEPAESPSETPG----------PSPAGPTRDE--------------PA 595
P G GD + PG P GP D+ P
Sbjct: 587 GRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPG 646
Query: 596 ES-------PSETPG-PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGP-S 645
E+ P TPG P G AG + P GP+ GP G + P PGP
Sbjct: 647 EAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQG 706
Query: 646 PAGP 649
P GP
Sbjct: 707 PIGP 710
Score = 45.1 bits (105), Expect = 2e-04
Identities = 56/192 (29%), Positives = 68/192 (35%), Gaps = 31/192 (16%)
Query: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP 542
G PA + + + +G + + P PG E P P PAGPAG P
Sbjct: 404 GVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGP-PGPAGPAG---IMGPPGLQ 459
Query: 543 GPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAES---PSETPGPSPAGPTRD-EPAESP 598
GP GP GD P PG A P P G GPT + A++
Sbjct: 460 GP--TGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQ 517
Query: 599 SETPGPR-----PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP-------SP 646
+ R P GP G T P P G G A+ S PGP P
Sbjct: 518 AILQQARIALRGPPGPMG--------LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGP 569
Query: 647 AGPTRDEPAKAG 658
GPT +P K G
Sbjct: 570 PGPT-GKPGKRG 580
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 79.7 bits (195), Expect = 8e-15
Identities = 90/328 (27%), Positives = 119/328 (36%), Gaps = 45/328 (13%)
Query: 327 GRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRK 386
G GP S GG +GP P +PQ GP + G +P+ P+ K R
Sbjct: 34 GNPQGP--SPQGGNKPQGPPPPPGKPQ--GPPPQGGNKPQGPPPPGKPQGPPPQGDKSR- 88
Query: 387 LELSRREQP--PTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCR 444
S R P P P PQ ++ + G G + G GG P P +
Sbjct: 89 ---SPRSPPGKPQGPPPQGGNQPQ-------GPPPPPGKPQ-GPPPQGGNRPQGPPPPGK 137
Query: 445 QPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDT 504
DK R R GG Q G P P G P+ + G
Sbjct: 138 PQGPPPQGDKSRSPRSPP--GKPQGPPPQGGNQP---QGPPPPPGKPQGPPPQGG----- 187
Query: 505 EGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP 564
K P P + GP P G P + GP P G G++P + P PG
Sbjct: 188 -----KKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQG--GNQP-QGPPPPPG- 238
Query: 565 RPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPG 623
+P GP P + ++ GP P G + PA+ S++ R P G P + + G
Sbjct: 239 KPQGP----PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQG 294
Query: 624 PRPAGPAGDEPAESPSETPGPSPAGPTR 651
P P PAG P + P P P GP R
Sbjct: 295 PPP--PAGGNP-QQPQAPPAGQPQGPPR 319
Score = 77.0 bits (188), Expect = 5e-14
Identities = 61/219 (27%), Positives = 83/219 (37%), Gaps = 24/219 (10%)
Query: 462 DEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSET 521
D +S ++ +G Q + G P G P G + + G K P P +
Sbjct: 22 DVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPP----GKPQGPPPQGGNKPQGPPPPGKP 77
Query: 522 PGPSPAGPAGDEPAESPSETPGPRPAG---PAGDEPAESPSETPGPRPAGPAGDEPAESP 578
GP P G P P + GP P G P G P P + GP P G + P
Sbjct: 78 QGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG--PPPPPGKPQGPPPQGGNRPQGPPPP 135
Query: 579 SETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESP 638
+ GP P G P P + GP P G G++P + P PG +P GP P +
Sbjct: 136 GKPQGPPPQGDKSRSPRSPPGKPQGPPPQG--GNQP-QGPPPPPG-KPQGP----PPQGG 187
Query: 639 SETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
+ GP P G + P + D S + GKP
Sbjct: 188 KKPQGPPPPGKPQGPPPQG-------DKSRSSQSPPGKP 219
Score = 76.6 bits (187), Expect = 7e-14
Identities = 60/215 (27%), Positives = 75/215 (34%), Gaps = 26/215 (12%)
Query: 485 PAPSGHPKAGHSENGVEEDTEGRTGPKEGTP---GSPSETPGPSPAGPAGDEP------- 534
P P G P+ + G +G P G+ + P P P P G P
Sbjct: 71 PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQ 130
Query: 535 -AESPSETPGPRPAGPAGDEPAESPSETPGPRPAG---PAGDEPAESPSETPGPSPAGPT 590
P + GP P G P P + GP P G P G P P + GP P G
Sbjct: 131 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG--PPPPPGKPQGPPPQGGK 188
Query: 591 RDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAG---PAGDEPAESPSETPGPSPA 647
+ + P + GP P G P + GP P G P G P P + GP P
Sbjct: 189 KPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQG--PPPPPGKPQGPPPQ 246
Query: 648 G---PTRDEPAKAGEAAELQDAEVESSAKS--GKP 677
G P P + Q SA+S GKP
Sbjct: 247 GGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKP 281
Score = 71.6 bits (174), Expect = 2e-12
Identities = 55/201 (27%), Positives = 72/201 (35%), Gaps = 20/201 (9%)
Query: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP 542
G P P G P+ + G GP PG P GP P G P P +
Sbjct: 110 GPPPPPGKPQGPPPQGGNRPQ-----GPPP--PGKPQ---GPPPQGDKSRSPRSPPGKPQ 159
Query: 543 GPRPAG---PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPS 599
GP P G P G P P + GP P G + P + GP P G P
Sbjct: 160 GPPPQGGNQPQGPPPP--PGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPG 217
Query: 600 ETPGPRPAG---PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAK 656
+ GP P G P G P P + GP P G + P + GP G ++ + A+
Sbjct: 218 KPQGPPPQGGNQPQGPPPP--PGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSAR 275
Query: 657 AGEAAELQDAEVESSAKSGKP 677
+ + E + G P
Sbjct: 276 SPPGKPQGPPQQEGNNPQGPP 296
Score = 58.2 bits (139), Expect = 3e-08
Identities = 72/291 (24%), Positives = 98/291 (33%), Gaps = 36/291 (12%)
Query: 303 PLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKG--------GGRVDEGPQPRSVEPQD 354
P +G K + PG P ++ P G GG +GP P +PQ
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 120
Query: 355 AGPL--ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQP--PTEPGPQSASEVEKI 410
P R QG G +P+ P+ K R S R P P P PQ ++ +
Sbjct: 121 PPPQGGNRPQGPPPPG----KPQGPPPQGDKSR----SPRSPPGKPQGPPPQGGNQPQ-- 170
Query: 411 ALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAA 470
G G + G GG+ P P + DK R +
Sbjct: 171 -----GPPPPPGKPQ-GPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPP--GKPQGP 222
Query: 471 VASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTP---GSPSETPGPSPA 527
GG Q G P P G P+ + G + G +G P GS S++ P
Sbjct: 223 PPQGGNQP---QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPG 279
Query: 528 GPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESP 578
P G E + P PAG +P P+ P P P G P+ P
Sbjct: 280 KPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 330
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 78.6 bits (192), Expect = 2e-14
Identities = 115/389 (29%), Positives = 143/389 (36%), Gaps = 67/389 (17%)
Query: 300 LPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLE 359
LP P+ EG PG P S R GP + G + P P+ P AG
Sbjct: 1064 LPGPVGALGLKGNEGPPGPPGPAGSPGER--GPAGAAGPIGIPGRPGPQG-PPGPAG--- 1117
Query: 360 RSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCAL 419
E G GE P+ + ++ + + L P PG +K + G
Sbjct: 1118 -----EKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG----DKGEIGEPGQKG 1168
Query: 420 SQGSLRTGTQEVGGQDPGEAVQPCRQP--LGARVADKVRKRRKVDEGAGDSAAVASGGAQ 477
S+G E G P P QP GA R ++ + GD G
Sbjct: 1169 SKGD----KGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPP 1224
Query: 478 -TLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPG--SPSETPGPS-PAGPAGD- 532
+ L G P P G E G D G+ GP G PG PS PG P GP G
Sbjct: 1225 GPVGLQGLPGPPG-------EKGETGDV-GQMGPP-GPPGPRGPSGAPGADGPQGPPGGI 1275
Query: 533 ----------EPAES-----PSETPGPRPAGPAGDEPAESPSETPGPR-PAGPAGDE-PA 575
EP E+ P E P P G G++ PS GP P GP GD+ P
Sbjct: 1276 GNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPK 1335
Query: 576 ESPSETPGPSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAE-SPSETPGPRPAGPAGDE 633
SP P GP P E PGP GP GD+ + P +T P P G G
Sbjct: 1336 GSPGPVGFPGDPGP----PGE-----PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPG-- 1384
Query: 634 PAESPSETPGPSPAGP--TRDEPAKAGEA 660
P+ P + P PAGP + E GEA
Sbjct: 1385 PSGPPGKRGPPGPAGPEGRQGEKGAKGEA 1413
Score = 78.2 bits (191), Expect = 2e-14
Identities = 119/435 (27%), Positives = 148/435 (34%), Gaps = 73/435 (16%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDHEAST--QGRTCGPEHSKG-----GGRVDEGPQPRS 349
P+ P P ++G PG P T QG+T GP G G + GP
Sbjct: 956 PTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT-GPPGPPGVVGPQGPTGETGPMGER 1014
Query: 350 VEPQDAGP-----------LERSQGDE--AGGHGEDRPEPLSPKESKKR------KLELS 390
P GP E ++GD AG G+D P L + L L
Sbjct: 1015 GHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLK 1074
Query: 391 RREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGAR 450
E PP PGP + S E+ G G R G Q G + + P G
Sbjct: 1075 GNEGPPGPPGP-AGSPGERGPAGAAGPIGIPG--RPGPQGPPGPAGEKGAPGEKGPQGPA 1131
Query: 451 VADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGP 510
D ++ + AG G + G P G K E G G TGP
Sbjct: 1132 GRDGLQGPVGLPGPAGPVGPPGEDGDK--GEIGEPGQKGS-KGDKGEQG----PPGPTGP 1184
Query: 511 KE--GTPGSPSETPGPSPAGPAG---DEPAESPSETPGPR-------------PAGPAGD 552
+ G PG P P G G + E P PGP G GD
Sbjct: 1185 QGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGD 1244
Query: 553 EPAESPSETPGPRPAGPAGDEPAESPSETPG----PSPAGPTRDEPAES-----PSETPG 603
P PGPR GP+G A+ P PG P G + EP E+ P E
Sbjct: 1245 VGQMGPPGPPGPR--GPSGAPGADGPQGPPGGIGNPGAVGE-KGEPGEAGEPGLPGEGGP 1301
Query: 604 PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAE 662
P P G G++ PS GP P GP GD+ P +PGP P + G A
Sbjct: 1302 PGPKGERGEKGESGPSGAAGPPGPKGPPGDD---GPKGSPGPVGFPGDPGPPGEPGPAG- 1357
Query: 663 LQDAEVESSAKSGKP 677
QD G+P
Sbjct: 1358 -QDGPPGDKGDDGEP 1371
Score = 71.6 bits (174), Expect = 2e-12
Identities = 102/361 (28%), Positives = 127/361 (35%), Gaps = 59/361 (16%)
Query: 338 GGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPT 397
G R + GP E GP R GG D P PL P +K KL + P
Sbjct: 826 GDRGEIGPPGPRGEDGPEGPKGR------GGPNGD-PGPLGPP-GEKGKLGVPGLPGYPG 877
Query: 398 EPGPQSASEVEKIALNLEGCALSQGSLRT-GTQEVGGQDPGEAVQPCRQPLGARVADKVR 456
GP+ + G +G T G GQ + R P G +
Sbjct: 878 RQGPKGSIGFP----GFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPK 933
Query: 457 KRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKA-------GHSENGVEEDTEGRTG 509
D AG G Q G P P G P GH E +G+TG
Sbjct: 934 GNSGGDGPAGPPGERGPNGPQ--GPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTG 991
Query: 510 PKEGTPGSPSETPGPSPAGPAGDEPAESPSETPG----PRPAGPAGDEPAESPSETPG-- 563
P G PG GP G+ P PG P AG G + P+ PG
Sbjct: 992 PP-GPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKD 1050
Query: 564 --------------PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSET-----PGP 604
P P G G + E P PGP+ P PA + PGP
Sbjct: 1051 GPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPA-GSPGERGPAGAAGPIGIPGRPGP 1109
Query: 605 R-PAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPS-PAGPTRDEPAKAGEAA 661
+ P GPAG++ A PG + P GPAG + + P PGP+ P GP ++ K GE
Sbjct: 1110 QGPPGPAGEKGA------PGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDK-GEIG 1162
Query: 662 E 662
E
Sbjct: 1163 E 1163
Score = 67.8 bits (164), Expect = 3e-11
Identities = 103/369 (27%), Positives = 129/369 (34%), Gaps = 45/369 (12%)
Query: 313 EGSPGDPDHEASTQGRTCGPEHSKG--GGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHG 370
+G PG P QG GP +G G + GPQ P + GPL + G G
Sbjct: 702 DGQPG-PKGNVGPQGEP-GPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKP--GLPGMPG 757
Query: 371 EDRPEPLSPKES---KKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLR-- 425
D P KE +K + P PGP+ + I L+G +G
Sbjct: 758 ADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIR-GLKGTKGEKGEDGFP 816
Query: 426 --TGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQ-TLALA 482
G + G D GE P G R D + GD + G + L +
Sbjct: 817 GFKGDMGIKG-DRGEIGPP-----GPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVP 870
Query: 483 GSPAPSGH--PKAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESP 538
G P G PK G G G K GTPG P P GP G+
Sbjct: 871 GLPGYPGRQGPKGSIGFPGFP----GANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGI 926
Query: 539 SETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-------PSPAGPTR 591
+ PGP+ GD PA P E P GP G + P PG P G T
Sbjct: 927 TGKPGPK-GNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETG 985
Query: 592 DEPAESPSETPG-PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG----PSP 646
+ P PG P GP G+ PG P GP G++ + G P P
Sbjct: 986 FQGKTGPPGPPGVVGPQGPTGETGPMGERGHPG--PPGPPGEQGLPGLAGKEGTKGDPGP 1043
Query: 647 AG-PTRDEP 654
AG P +D P
Sbjct: 1044 AGLPGKDGP 1052
Score = 66.2 bits (160), Expect = 9e-11
Identities = 63/218 (28%), Positives = 79/218 (36%), Gaps = 32/218 (14%)
Query: 474 GGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK--EGTPGSPSETPG-------- 523
G A + L G P P G P +G + E G GP+ +G PG P+ PG
Sbjct: 559 GPAGPMGLTGRPGPVGPPGSGGLKG--EPGDVGPQGPRGVQGPPG-PAGKPGRRGRAGSD 615
Query: 524 -----PSPAGPAGDEPAESPSETPGPR----------PAGPAGDEPAESPSETPGPRP-A 567
P GP GD + + PG + P GP GD+ GPR
Sbjct: 616 GARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLP 675
Query: 568 GPAGDEPAESPSETPG-PSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPR 625
G G P PG P P G T + P GP+ GP G + PGP+
Sbjct: 676 GEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQ 735
Query: 626 PA-GPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAE 662
A GP G++ PG A P K G E
Sbjct: 736 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGE 773
Score = 65.1 bits (157), Expect = 2e-10
Identities = 106/438 (24%), Positives = 143/438 (32%), Gaps = 97/438 (22%)
Query: 312 EEGSPGDPDHEASTQGRTC--GPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGH 369
++GS GD E G T GP G D P PR + L +GDE
Sbjct: 1166 QKGSKGDKG-EQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQG-----LFGQKGDEGPRG 1219
Query: 370 GEDRPEPLS------PKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGS 423
P P+ P K ++ + PP PGP+ S A +G G
Sbjct: 1220 FPGPPGPVGLQGLPGPPGEKGETGDVGQMG-PPGPPGPRGPSG----APGADGPQGPPGG 1274
Query: 424 LRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVAS---------- 473
+ +PGEA +P G K + K + G +A
Sbjct: 1275 IGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGP 1334
Query: 474 -GGAQTLALAGSPAPSGHP-KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS------ 525
G + G P P G P AG ++ +G G + G+PG P+ PGPS
Sbjct: 1335 KGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPG-QTGSPG-PTGEPGPSGPPGKR 1392
Query: 526 -PAGPAGDEPAESPSETPG-------PRPAGPAGDEPAESPSETPG----PRPAGPAGDE 573
P GPAG E + G P GP G + A G P P G G
Sbjct: 1393 GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP 1452
Query: 574 PAESPSETPGPSPA-------------------------GPTRDEPAESPSETPGPR-PA 607
+ P PGP GP ++ + PGP+ +
Sbjct: 1453 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS 1512
Query: 608 GPAGDEPAESPSET------------PGPR-------PAGPAGDEPAESPSETPGPSPAG 648
GP G++ PS PGP+ P GP G+ P PGP P
Sbjct: 1513 GPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGP-PGE 1571
Query: 649 PTRDEPAKAGEAAELQDA 666
+ P +A DA
Sbjct: 1572 VIQPLPIQASRTRRNIDA 1589
Score = 62.4 bits (150), Expect = 1e-09
Identities = 89/326 (27%), Positives = 110/326 (33%), Gaps = 56/326 (17%)
Query: 313 EGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGE- 371
+G PG P R G GG +GP + E Q L++++ G G
Sbjct: 510 DGLPGPPGTMLMLPFRFGG-----GGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPM 564
Query: 372 ---DRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGT 428
RP P+ P S K E P + GPQ G
Sbjct: 565 GLTGRPGPVGPPGSGGLKGE-------PGDVGPQ------------------------GP 593
Query: 429 QEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQ-TLALAGSPAP 487
+ V G PG A +P R+ G +D R GD G G P P
Sbjct: 594 RGVQGP-PGPAGKPGRR--GRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGP 650
Query: 488 SGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETP--GP-SPAGPAGDEPAESPSETPGP 544
SG P G + E +G GP+ G PG P GP P GP G PGP
Sbjct: 651 SGPP--GPPGDDGERGDDGEVGPR-GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGP 707
Query: 545 R-PAGPAGDEPAESPSETPG----PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPS 599
+ GP G+ PG P P G G + P PG P P D P P
Sbjct: 708 KGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPG-LPGMPGADGPPGHPG 766
Query: 600 ETPGPRPAGPAGDEPAESPSETPGPR 625
+ P G G + P PGPR
Sbjct: 767 KEGPPGEKGGQGPPGPQGPIGYPGPR 792
Score = 51.2 bits (121), Expect = 3e-06
Identities = 54/204 (26%), Positives = 68/204 (33%), Gaps = 37/204 (18%)
Query: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP 542
G A S P E+ + + G G T P P GP G +
Sbjct: 529 GGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDV 588
Query: 543 GPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETP 602
GP+ GP G + P+ PG R G AG + A P GP D + + P
Sbjct: 589 GPQ--GPRGVQGPPGPAGKPGRR--GRAGSDGARGM-----PGQTGPKGDRGFDGLAGLP 639
Query: 603 GPR----------PAGPAGDE----------PAESPSETPGPR-------PAGPAGDEPA 635
G + P GP GD+ P P E PGPR P GP G
Sbjct: 640 GEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGE-PGPRGLLGPKGPPGPPGPPGV 698
Query: 636 ESPSETPGPSPAGPTRDEPAKAGE 659
PGP + EP G+
Sbjct: 699 TGMDGQPGPKGNVGPQGEPGPPGQ 722
Score = 48.9 bits (115), Expect = 2e-05
Identities = 59/217 (27%), Positives = 73/217 (33%), Gaps = 50/217 (23%)
Query: 505 EGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPG-------PRPAGP-------- 549
EG GP EG G P P G GD P PG P P G
Sbjct: 468 EGPPGP-EGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRF 526
Query: 550 --AGDEPAESPSETPGPRPA------------GPAGDEPAESPSETPGPSPAGPTRDEPA 595
GD ++ P + A GPAG GP +G + EP
Sbjct: 527 GGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPG 586
Query: 596 ESPSETPGPR----PAGPAGDEPAESPSETPG----PRPAGPAGDEPAESPSETPG---- 643
+ + GPR P GPAG + + G P GP GD + + PG
Sbjct: 587 DVGPQ--GPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGH 644
Query: 644 ---PSPAGPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
P P+GP P GE + D EV G+P
Sbjct: 645 RGDPGPSGPP-GPPGDDGERGD--DGEVGPRGLPGEP 678
Score = 42.0 bits (97), Expect = 0.002
Identities = 54/215 (25%), Positives = 67/215 (31%), Gaps = 25/215 (11%)
Query: 460 KVDEGAGDSAAVASGGAQTLALAG--SPAPSGHPKAGHSENGVEEDTEGRTG---PKEGT 514
+ EGAG V G + +P+P G E ++ T+ G P
Sbjct: 322 ETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEIPTSTA 381
Query: 515 PGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEP 574
S S P P P A D E ET DE P P P+ P
Sbjct: 382 DTSNSSNPAPPPGEGADDLEGEFTEETIRNL------DENYYDPYYDPTSSPSEIGPGMP 435
Query: 575 AESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGP----RPAGPA 630
A + G + + E PG GP G E P+ PGP P G
Sbjct: 436 ANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPG---PEGPAGLPGPPGTMGPTGQV 492
Query: 631 GDEPAESPSETPG-------PSPAGPTRDEPAKAG 658
GD P PG P P G P + G
Sbjct: 493 GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFG 527
Score = 31.6 bits (70), Expect = 2.5
Identities = 39/154 (25%), Positives = 50/154 (32%), Gaps = 5/154 (3%)
Query: 490 HPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGP 549
+P ++E E +T P P + P PS E A+ +E P P
Sbjct: 258 NPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPV---EAAKETTEVPEELTPTP 314
Query: 550 AGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGP-TRDEPAESPSETPGPRPAG 608
P SE G GD + PSP T E E+P + P
Sbjct: 315 TEAAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGA 374
Query: 609 PAGDEPAE-SPSETPGPRPAGPAGDEPAESPSET 641
A+ S S P P P A D E ET
Sbjct: 375 EIPTSTADTSNSSNPAPPPGEGADDLEGEFTEET 408
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 78.6 bits (192), Expect = 2e-14
Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 22/186 (11%)
Query: 487 PSGHPKAGHSENGVEEDTEGRTGPKEG----TPGSPSETPGPSPAGPAGDEPAESPSE-T 541
PS P A + E G P TP TP P A P+ D+ ++P+E
Sbjct: 360 PSAPPSADDNIKTTAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAEHL 419
Query: 542 PGPRPAGPAGDEPAESPSE---TPGPRPAGPAGDEPAESPSE-TPGPSPAGPTRDEPAES 597
GP P P+ D+ ++PSE TP P A P+ D+ ++P+E GP P P+ D+ ++
Sbjct: 420 RGPLP--PSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLP--PSADDNLKT 475
Query: 598 PSE---TPGPRPAGPAGDEPAESPSE-TPGPRPAGPAGDEPAESPSE---TPGPSPAGPT 650
PSE TP P A P+ D+ ++P+E GP P P+ D+ ++PSE TP P A P+
Sbjct: 476 PSERQLTPLPPSAPPSADDNIKTPAEHLRGPLP--PSADDNLKTPSERQLTPLPPSAPPS 533
Query: 651 RDEPAK 656
D+ K
Sbjct: 534 ADDNIK 539
Score = 67.8 bits (164), Expect = 3e-11
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 514 TPGSPSETPGPSPAGPAGDEPAESPSE-TPGPRPAGPAGDEPAESPSE---TPGPRPAGP 569
TP TP P A P+ D+ ++P+E GP P P+ D+ ++PSE TP P A P
Sbjct: 902 TPSKRQLTPLPPSAPPSADDNIKTPAERLRGPLP--PSADDNLKTPSERQLTPLPPSAPP 959
Query: 570 AGDEPAESPSE-TPGPSPAGPTRDEPAESPSE---TPGPRPAGPAGDEPAESPSE-TPGP 624
+ D+ ++P+E GP P P+ D+ ++PSE TP P A + D+ ++P+E GP
Sbjct: 960 SADDNIKTPAERLRGPLP--PSADDNLKTPSERQLTPLPPSAPTSADDNIKTPAERLRGP 1017
Query: 625 RPAGPAGDEPAESP----SETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
P P+ D+ ++P E P P R A+ E + V S KP
Sbjct: 1018 LP--PSADDNLKTPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEPSRKP 1072
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 77.4 bits (189), Expect = 4e-14
Identities = 59/188 (31%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 497 ENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR------PAGPA 550
E G EE+ EG + P + +P P +E A+SP+E P PA
Sbjct: 487 EGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEE-AKSPAEAKSPEKEEAKSPAEVK 545
Query: 551 GDEPAESPS--ETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAG 608
E A+SP+ E P A E A+SP+E P A E A+SP+E P A
Sbjct: 546 SPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605
Query: 609 PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEV 668
E A+SP+E P E A+SP+E P A E AK+ E A+ + E
Sbjct: 606 SPVKEEAKSPAEAKSP------VKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEE 659
Query: 669 ESSAKSGK 676
S + K
Sbjct: 660 AKSPEKAK 667
Score = 73.2 bits (178), Expect = 8e-13
Identities = 76/308 (24%), Positives = 116/308 (37%), Gaps = 34/308 (11%)
Query: 381 ESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAV 440
E K + +E S +E E + E++ E + G +E GG++
Sbjct: 441 EEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEE----KEAKEEEGKEEEGGEEEE--- 493
Query: 441 QPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGV 500
A ++ K +E A S + A SPA + P+ +++
Sbjct: 494 --------AEGGEEETKSPPAEEAASPEKEAKSPVKEE---AKSPAEAKSPEKEEAKSPA 542
Query: 501 EEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSE 560
E + P++ + E P A E A+SP+E P A E A+SP+E
Sbjct: 543 EVKS-----PEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAE 597
Query: 561 TPGPRPAGPAGDEPAESPSETPGP------SPAGPTRDEPAESPS--ETPGPRPAGPAGD 612
P A E A+SP+E P SPA E A+SP+ E P A
Sbjct: 598 AKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEK 657
Query: 613 EPAESPSETPGPRPAGPAGDEPAESPSETPGPSP---AGPTRDEPAKAGEAAELQDAEVE 669
E A+SP + P A E A+SP + SP P ++E +A E +
Sbjct: 658 EEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 717
Query: 670 SSAKSGKP 677
S K+ P
Sbjct: 718 SPEKAKSP 725
Score = 63.9 bits (154), Expect = 5e-10
Identities = 73/300 (24%), Positives = 115/300 (38%), Gaps = 12/300 (4%)
Query: 375 EPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQ 434
E ++ +E K+ K E + E+ E + E K + E A + ++ +E +
Sbjct: 468 EEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETK-SPPAEEAASPEKEAKSPVKEEA-K 525
Query: 435 DPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSA-AVASGGAQTLALAGSPAPSGHPKA 493
P EA P ++ A+ +V+ K A + A + + A SPA P+
Sbjct: 526 SPAEAKSPEKEE--AKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEK 583
Query: 494 GHSENGVEEDTEGRT-GPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGD 552
S E + P++ E P+ A E A+SP+E P A
Sbjct: 584 AKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTK 643
Query: 553 EPAESPSETPGPRPAGPAGDEPAESPSETPGPSP---AGPTRDEPAESPSETPGPRPAGP 609
E A+SP + P E A+SP + SP P + E A+SP + P
Sbjct: 644 EEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAE-AKSPEKAKSPVKEEA 702
Query: 610 AGDEPAESP--SETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAE 667
E A+SP E P A E A++P + P E AK+ E A+ D +
Sbjct: 703 KSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVK 762
Score = 62.8 bits (151), Expect = 1e-09
Identities = 87/377 (23%), Positives = 134/377 (35%), Gaps = 28/377 (7%)
Query: 311 EEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHG 370
EEEG + E +G G E +K + S E + P++ A
Sbjct: 480 EEEGKEEEGGEEEEAEG---GEEETKS----PPAEEAASPEKEAKSPVKEEAKSPAEAKS 532
Query: 371 EDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQE 430
++ E SP E K + S ++ P + E E+ E S ++ +E
Sbjct: 533 PEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAE--VKSPEKAKSPAKE 590
Query: 431 VGGQDPGEAVQP--CRQPLGARVADKVRKRRKVDEGAGDSAAVAS---GGAQTLALAGSP 485
+ P EA P + P+ + V E A A V S + T A SP
Sbjct: 591 EA-KSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSP 649
Query: 486 APSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESP--SETPG 543
KA E + E P + SP + P A E A+SP E
Sbjct: 650 E-----KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKS 704
Query: 544 PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPG 603
P A E A+SP + P E A+SP + SP E A++ +
Sbjct: 705 PEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKT-LDVKS 763
Query: 604 PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP---SPAGPTRDEPAKAGEA 660
P PA +E A SP++ + P +E +SP + P P ++ P K
Sbjct: 764 PEAKTPAKEE-ARSPADKFPEKAKSPVKEE-VKSPEKAKSPLKEDAKAPEKEIPKKEEVK 821
Query: 661 AELQDAEVESSAKSGKP 677
+ +++ E K +P
Sbjct: 822 SPVKEEEKPQEVKVKEP 838
Score = 59.3 bits (142), Expect = 1e-08
Identities = 75/330 (22%), Positives = 126/330 (38%), Gaps = 34/330 (10%)
Query: 346 QPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSAS 405
+ + + ++ E + +EA G E+ P + + + K S ++ P +
Sbjct: 474 EEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSP 533
Query: 406 EVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGA 465
E E+ E S ++ +E + P EA P ++ A+ +V+ K A
Sbjct: 534 EKEEAKSPAE--VKSPEKAKSPAKEEA-KSPPEAKSPEKEE--AKSPAEVKSPEKAKSPA 588
Query: 466 GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS 525
+ A + A++ A SP +++ V+E+ + SP+E P
Sbjct: 589 KEEAK-SPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAK-----------SPAEVKSPE 636
Query: 526 PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPS 585
A E A+SP + P E A+SP + P A E A+SP + S
Sbjct: 637 KAKSPTKEEAKSPEKAKSPE------KEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKS 690
Query: 586 PAGPTRDEPAESP--SETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 643
P E A+SP E P A E A+SP + P E A+SP +
Sbjct: 691 P------EKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEA 744
Query: 644 PSPAGPTRDEPAKAGEAAELQDAEVESSAK 673
SP E AK +++ E ++ AK
Sbjct: 745 KSPEKAKSPEKAK---TLDVKSPEAKTPAK 771
Score = 50.4 bits (119), Expect = 5e-06
Identities = 80/385 (20%), Positives = 144/385 (37%), Gaps = 36/385 (9%)
Query: 307 SRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEA 366
++ E+ SP + ++ + ++ E +K V + +S ++A E+++ E
Sbjct: 598 AKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPE- 656
Query: 367 GGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRT 426
+ E SP+++K ++ + P A EK ++ A S ++
Sbjct: 657 ------KEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKS 710
Query: 427 GTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPA 486
+E + P +A P ++ A+ +K + K +E A + A+TL + A
Sbjct: 711 PVKEEA-KSPEKAKSPVKEE--AKTPEKAKSPVK-EEAKSPEKAKSPEKAKTLDVKSPEA 766
Query: 487 PSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGP---SPAGPAGDEPAESPSETPG 543
+ P + + ++ E P + SP + P P + P + ++P
Sbjct: 767 KT--PAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPV 824
Query: 544 PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETP----GPSPAGPTRDEPA-ES 597
P + E P + + PA P +E +S E P P + EPA E
Sbjct: 825 KEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEK 884
Query: 598 PSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESP-----SETPGPSPAGPTRD 652
P E+ A E AE + P P PA E E +E P
Sbjct: 885 PKESKVE-----AKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAK 939
Query: 653 EPAKAGE----AAELQDAEVESSAK 673
EP+K E A E +D + E + K
Sbjct: 940 EPSKPAEKKEAAPEKKDTKEEKAKK 964
Score = 38.5 bits (88), Expect = 0.021
Identities = 45/177 (25%), Positives = 64/177 (36%), Gaps = 20/177 (11%)
Query: 491 PKAGHSENGVEEDTEGRTGPK---EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPA 547
PK ++ +E+ + PK E E P S A E AE + P P
Sbjct: 851 PKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKV-EAKKEEAEDKKKVPTPEKE 909
Query: 548 GPAGDEPAES--PSETPGPRPAGPAGDEPAESPSETPGPSPAGP----TRDEPAESPSET 601
PA E E P E P D A+ PS+ A P T++E A+ P E
Sbjct: 910 APAKVEVKEDAKPKEKTEVAKKEP-DDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEK 968
Query: 602 PGPRPAGPAGDEPAESPSETPGPRPAGPAGD--EPAESPSETPGPSPAGPTRDEPAK 656
P + A+ +T P+ P + E + S + P T D+ AK
Sbjct: 969 -------PKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAK 1018
Score = 37.7 bits (86), Expect = 0.035
Identities = 78/384 (20%), Positives = 134/384 (34%), Gaps = 43/384 (11%)
Query: 305 EGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDA-GPLERSQG 363
E ++ E+ SP + ++ + ++ +K + + + P+ A P++
Sbjct: 644 EEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAK 703
Query: 364 DEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGS 423
+ E SP+++K E ++ + P + A EK + L S
Sbjct: 704 SPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKS 763
Query: 424 --LRTGTQEVGGQDPGEAVQPCRQPLGARVA--DKVRKRRKVDEGAGD----------SA 469
+T +E + + + P+ V +K + K D A + S
Sbjct: 764 PEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSP 823
Query: 470 AVASGGAQTLALAGSPAPSGHPKAGHSENGVEE-DTEGRTGPKEGTPGSPSETPGPSPAG 528
Q + + P + KA + E+ D++ PK+ P E
Sbjct: 824 VKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVE----EKKE 879
Query: 529 PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAES--PSETPGPSP 586
PA ++P ES E A E AE + P P PA E E P E +
Sbjct: 880 PAVEKPKESKVE---------AKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAK 930
Query: 587 AGPTRDEPAESPSETPGPRPAGP----AGDEPAESPSETPGPRPAGPAGD-----EPAES 637
P D A+ PS+ + A P +E A+ P E P D EP++
Sbjct: 931 KEPD-DAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKP 989
Query: 638 PSETPGPSPAGPTRDE--PAKAGE 659
+E S + +D P KA E
Sbjct: 990 KAEKAEKSSSTDQKDSKPPEKATE 1013
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 76.6 bits (187), Expect = 7e-14
Identities = 110/410 (26%), Positives = 132/410 (32%), Gaps = 73/410 (17%)
Query: 299 SLPHPLEGSRKVEEEGSPGDPDHEASTQGR------TCGPEHSKGGGRVD--EGPQPRSV 350
SL L S +P P+ A+ G + P + G G EG +
Sbjct: 28 SLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAP 87
Query: 351 EPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKI 410
EP AG GG G RP P SP RR P P P +A K+
Sbjct: 88 EPPPAGRAR------PGGGGPQRPGPPSP-----------RRPLVPAGPAPPAA----KL 126
Query: 411 ALNLEGCALSQGSLRTGTQEVGGQDP---GEAVQPCRQPLGARVADKVRKRRKVDEGAGD 467
EG A S + G +P G A L AR G G
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGP 186
Query: 468 SAAVASGGAQTLALAGSPAPSGH---PKAGHSENG----------VEEDTEGRTGPKEGT 514
G AQTL + + S H P NG T +T P G
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGA 246
Query: 515 -----PGSPSETPGPSPAGPAGDEPAESPSET----PGPRPAGPAGDEPAESP------- 558
P +PS P+PA PA P P+ P PAGP PA P
Sbjct: 247 AAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG 306
Query: 559 -----SETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDE 613
+ P P GPAG S PG + A P AESP P PA
Sbjct: 307 GSAGAAPAPAPAAGGPAG----VSGQPGPGAAAAAPAPGVKAESPKRVVQAAP--PAAQT 360
Query: 614 PAES-PSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAE 662
A S P+ T GP SP+ P P+P PT AG +
Sbjct: 361 LAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQ 410
Score = 58.5 bits (140), Expect = 2e-08
Identities = 72/254 (28%), Positives = 86/254 (33%), Gaps = 43/254 (16%)
Query: 432 GGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHP 491
G Q PG P R + A A K R EG+ S A A A+A P P+
Sbjct: 101 GPQRPGPP-SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAA---AVAAGPEPA--- 153
Query: 492 KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSP-AGPAGDEPAESPSETPGPRPAGPA 550
P P++ GP+ A AG P P PGP P PA
Sbjct: 154 -----------------------PAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPA 190
Query: 551 GDEPAE----SPSETPGPRPAGPAGDEPAESPSET-PGPSPAGP-TRDEPAESPSETPGP 604
G A+ S + A PA P+ P P PA P T + P
Sbjct: 191 GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPP 250
Query: 605 RPAGP---AGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAA 661
PA P A PA +P+ P P P PA A P GP A P PA A
Sbjct: 251 APAAPSPPAAPAPA-APAAAPPPPPPAPA--TLARPPGHPAGPPTAAPAVPPPAAAQNGG 307
Query: 662 ELQDAEVESSAKSG 675
A + A G
Sbjct: 308 SAGAAPAPAPAAGG 321
Score = 44.7 bits (104), Expect = 3e-04
Identities = 36/114 (31%), Positives = 44/114 (38%), Gaps = 11/114 (9%)
Query: 567 AGPAGDEPAE-SPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGP- 624
AG G+ SP+ G PA P P +P P R A P G P + PGP
Sbjct: 55 AGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGR-ARPGGGGP-----QRPGPP 108
Query: 625 ---RPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSG 675
RP PAG P + P AG PA A AA + A + +G
Sbjct: 109 SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAG 162
>gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens]
Length = 1028
Score = 76.6 bits (187), Expect = 7e-14
Identities = 63/187 (33%), Positives = 71/187 (37%), Gaps = 26/187 (13%)
Query: 481 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE 540
+ G P P G P A G G K G PG+ E P +GP+GDE P E
Sbjct: 354 IQGPPGPKGDPGAF-----------GLKGEK-GEPGADGEAGRPGSSGPSGDEG--QPGE 399
Query: 541 TPGPRPAGPAGDE----PAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAE 596
P G AGDE P +P E GP GP G P PG AGP D+ E
Sbjct: 400 PGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGTRGPRGDPGE--AGPQGDQGRE 457
Query: 597 SPSETPG-PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPA 655
P PG P AGP G + PG G A P+ PG R E
Sbjct: 458 GPVGVPGDPGEAGPIGPKGYRGDEGPPGSE-----GARGAPGPAGPPGDPGLMGERGEDG 512
Query: 656 KAGEAAE 662
AG E
Sbjct: 513 PAGNGTE 519
Score = 63.9 bits (154), Expect = 5e-10
Identities = 100/355 (28%), Positives = 130/355 (36%), Gaps = 42/355 (11%)
Query: 330 CGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLEL 389
C P G R D G + +P G + EAG G RP L P + K E
Sbjct: 252 CQPARGPPGLRGDPGFEGERGKPGLPG-----EKGEAGDPG--RPGDLGPVGYQGMKGEK 304
Query: 390 SRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLR-TGTQEVGGQDPGEAVQPCRQPLG 448
R + + GP+ EK ++G +G + G G + +Q P G
Sbjct: 305 GSRGEKGSR-GPKGYKG-EKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGIQGPPGPKG 362
Query: 449 ARVADKVRKRRKVDEGAGDSAAV--ASGGAQTLALAGSPAPSGHP-KAGHSENGVEEDTE 505
A + K K + GA A +SG + G P P G +AG N +
Sbjct: 363 DPGAFGL-KGEKGEPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAP 421
Query: 506 G-RTGPKE----GTPGSPSETPGPSPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPS 559
G R GP E GTPG+ P AGP GD+ E P PG P AGP G +
Sbjct: 422 GERGGPGERGPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDE 481
Query: 560 ETPG-------PRPAGPAGDEPAESPSETPGPSPAGP-----------TRDEPAESPSE- 600
PG P PAGP GD GP+ G R P + ++
Sbjct: 482 GPPGSEGARGAPGPAGPPGDPGLMGERGEDGPAGNGTEGFPGFPGYPGNRGAPGINGTKG 541
Query: 601 TPGPR-PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-PSPAGPTRDE 653
PG + G AGD P + ++ G G E P PG P GP E
Sbjct: 542 YPGLKGDEGEAGD-PGDDNNDIAPRGVKGAKGYRGPEGPQGPPGHQGPPGPDECE 595
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 76.3 bits (186), Expect = 9e-14
Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 18/155 (11%)
Query: 514 TPGSPSETPGPSPAGPAGDEPAESPSE-TPGPRPAGPAGDEPAESPSE---TPGPRPAGP 569
TP TP P A P+ D+ ++P+E GP P P+ D+ ++PSE TP P A P
Sbjct: 387 TPSERQLTPLPPSAPPSADDNIKTPAERLRGPLP--PSADDNLKTPSERQLTPLPPSAPP 444
Query: 570 AGDEPAESPSE-TPGPSPAGPTRDEPAESPSE---TPGPRPAGPAGDEPAESPSE-TPGP 624
+ D+ ++P+E GP P P+ D+ ++PSE TP P A P+ D+ ++P+E GP
Sbjct: 445 SADDNIKTPAERLRGPLP--PSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGP 502
Query: 625 RPAGPAGDEPAESPSE---TPGPSPAGPTRDEPAK 656
P P+ D+ ++PSE TP P A P+ D+ K
Sbjct: 503 LP--PSADDNLKTPSERQLTPLPPSAPPSADDNIK 535
Score = 39.7 bits (91), Expect = 0.009
Identities = 47/196 (23%), Positives = 68/196 (34%), Gaps = 29/196 (14%)
Query: 487 PSGHPKAGHSENGVEEDTEGRTGPKEG----TPGSPSETPGPSPAGPAGDEPAESPSE-T 541
PS P A + E G P TP TP P A P+ D+ ++P+E
Sbjct: 482 PSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERL 541
Query: 542 PGPRPAGPAGDEPAESP----SETPGPRPAGPAGDEPAE-SPSETPGPSPAG-------P 589
GP P P+ D+ ++P E +P P AE P P G P
Sbjct: 542 RGPLP--PSADDNLKTPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEPSRKP 599
Query: 590 TRDEPAESPSETPGPRPAGPAGDEPAESPS---------ETPGPRPAGPAGDEPAESPSE 640
R A+ +P P+ EP+ P +P P+ EP+ P
Sbjct: 600 KRRRAADVEPSSPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDVEPSRKPKR 659
Query: 641 TPGPSPAGPTRDEPAK 656
+ P+ EP +
Sbjct: 660 RRA-ADVEPSLPEPKR 674
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 75.5 bits (184), Expect = 2e-13
Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 463 EGAGDSAAVASGGAQTLALAGSPAPSGHPK-AGHSENGVEEDTEGRTGPKEGTPGS---P 518
E GD +GGA+ A +G G P AG G D++ + P EG + P
Sbjct: 208 EDKGDPEGPEAGGAEQKAASGCERLQGPPTPAGKETEGSLSDSDFKEPPSEGRLDALQGP 267
Query: 519 SETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESP 578
T GPSPAGPA AE P+ P PAG PA P G P GP G SP
Sbjct: 268 PRTGGPSPAGPAAARLAEDPA------PHYPAG-APAPGPHPAAGEVPPGPGGPSVIHSP 320
Query: 579 SETPGPSP-AGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGP---RPAGPAGDEP 634
P P+ A P AE + + + G G+E + P PGP + G + P
Sbjct: 321 PPPPPPAVLAKPKLWSLAEIATSSDKVKDGG-GGNEGSPCP-PCPGPIAGQALGGSRASP 378
Query: 635 AESPSETPG---PSPAGPTRDEP 654
A +PS +P P P G P
Sbjct: 379 APAPSRSPSAQCPFPGGTVLSRP 401
Score = 55.8 bits (133), Expect = 1e-07
Identities = 44/129 (34%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 532 DEPA--ESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGP 589
DEP E + GP AG A + A GP PAG E S S++ P
Sbjct: 202 DEPQKPEDKGDPEGPE-AGGAEQKAASGCERLQGPPT--PAGKETEGSLSDSDFKEPPSE 258
Query: 590 TRDEPAESPSETPGPRPAGPAGDEPAESP-------SETPGPRPA------GPAGDEPAE 636
R + + P T GP PAGPA AE P + PGP PA GP G
Sbjct: 259 GRLDALQGPPRTGGPSPAGPAAARLAEDPAPHYPAGAPAPGPHPAAGEVPPGPGGPSVIH 318
Query: 637 SPSETPGPS 645
SP P P+
Sbjct: 319 SPPPPPPPA 327
Score = 42.7 bits (99), Expect = 0.001
Identities = 36/106 (33%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 552 DEPA--ESPSETPGPRPAGPAGDEPAESPSETPGP-SPAGPTRDEPAESPSETPGPRPAG 608
DEP E + GP AG A + A GP +PAG E S S++ P
Sbjct: 202 DEPQKPEDKGDPEGPE-AGGAEQKAASGCERLQGPPTPAGK---ETEGSLSDSDFKEPPS 257
Query: 609 PAGDEPAESPSETPGPRPAGPAGDEPAESP-------SETPGPSPA 647
+ + P T GP PAGPA AE P + PGP PA
Sbjct: 258 EGRLDALQGPPRTGGPSPAGPAAARLAEDPAPHYPAGAPAPGPHPA 303
Score = 37.0 bits (84), Expect = 0.060
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 572 DEPA--ESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGP 629
DEP E + GP AG + A GP PAG E S S++ P
Sbjct: 202 DEPQKPEDKGDPEGPE-AGGAEQKAASGCERLQGPPT--PAGKETEGSLSDSDFKEPPSE 258
Query: 630 AGDEPAESPSETPGPSPAGP 649
+ + P T GPSPAGP
Sbjct: 259 GRLDALQGPPRTGGPSPAGP 278
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 74.7 bits (182), Expect = 3e-13
Identities = 78/261 (29%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 436 PGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGH 495
P AV P +P A +E +AAV + T A P P
Sbjct: 1029 PAAAVPPPEEPTSPAAAVPTP-----EEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAA 1083
Query: 496 SENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR-PAGPAGDEP 554
+ EE T P P +P E P+ A P +EPA + P P PA PA P
Sbjct: 1084 AVPTPEEPTS----PAAAVP-TPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVP 1138
Query: 555 AESPSETPGPRPAGPAGDEPAES------PSETPGPSPAGPTRDEPAESPSETPG----P 604
+P E P PA P +E A + P E+ P+ A PT PAES S
Sbjct: 1139 --TPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPT---PAESASFAAVVATLE 1193
Query: 605 RPAGPAGDEPAESP-----SETPGPRPAGPAGDEPAE------SPSETPGPSPAGPTRDE 653
P PA P + E P + P +EPA +P E P+ A PT +E
Sbjct: 1194 EPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEE 1253
Query: 654 PAKAGEAAELQDAEVESSAKS 674
P + AA L E+ S A S
Sbjct: 1254 PTSSA-AAVLTPEELSSPAAS 1273
Score = 74.3 bits (181), Expect = 3e-13
Identities = 62/198 (31%), Positives = 78/198 (39%), Gaps = 25/198 (12%)
Query: 501 EEDTEGRTGPKEGTPGSPSET-PGPS-PAGPAGDEPAESPSETPGPRPAGPAGDEPAE-- 556
E DT P SP+ P P P PA P +P E P A P +EP
Sbjct: 986 EPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVP--TPEEPTSPAAAVPPPEEPTSPA 1043
Query: 557 ----SPSETPGPRPAGPAGDEPAE------SPSETPGPSPAGPTRDEPAE------SPSE 600
+P E P A P +EP +P E P+ A PT +EP +P E
Sbjct: 1044 AAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEE 1103
Query: 601 TPGPRPAGPAGDEPAESPSETPGP-RPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGE 659
P A P +EPA + P P PA PA P +P E P+PA PT +E A A
Sbjct: 1104 PTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVP--TPEEPAFPAPAVPTPEESASAAV 1161
Query: 660 AAELQDAEVESSAKSGKP 677
A + +A P
Sbjct: 1162 AVPTPEESASPAAAVPTP 1179
Score = 73.9 bits (180), Expect = 4e-13
Identities = 67/213 (31%), Positives = 87/213 (40%), Gaps = 25/213 (11%)
Query: 462 DEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSET 521
+E A +AAV + T A P P + EE T +P + T
Sbjct: 998 EEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPT---------SPAAAVPT 1048
Query: 522 PGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP-RPAGPAGDEPAESPSE 580
P P PA P +P E P A P +EP + P P P PA P +P E
Sbjct: 1049 P-EEPTSPAAAVP--TPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP--TPEE 1103
Query: 581 TPGPSPAGPTRDEPAESPSETPGP-RPAGPAGDEPAESPSETPGPRPAGPAGDEPAE--- 636
P+ A PT +EPA + P P PA PA P +P E P PA P +E A
Sbjct: 1104 PTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVP--TPEEPAFPAPAVPTPEESASAAV 1161
Query: 637 ---SPSETPGPSPAGPTRDEPAK-AGEAAELQD 665
+P E+ P+ A PT E A A A L++
Sbjct: 1162 AVPTPEESASPAAAVPTPAESASFAAVVATLEE 1194
Score = 71.6 bits (174), Expect = 2e-12
Identities = 66/224 (29%), Positives = 86/224 (38%), Gaps = 27/224 (12%)
Query: 461 VDEGAGDSAAVASGGAQTLALAGSPAPSGHPK-AGHSENGVEEDTEGRTGPKEGTPGSPS 519
V EG AAV+S A+A + G AG S ++GTP P
Sbjct: 916 VPEGTAAVAAVSSPEETAPAVAAAITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGPV 975
Query: 520 ETPGPSPAGPAGDEPA----ESPSETPGPRPAGPAGDEPAE------SPSETPGPRPAGP 569
TP + P + A +P E P A P +EP +P E P A P
Sbjct: 976 -TPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP 1034
Query: 570 AGDEPAE------SPSETPGPSPAGPTRDEPAE------SPSETPGPRPAGPAGDEPAES 617
+EP +P E P+ A PT +EP +P E P A P +EP
Sbjct: 1035 PPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSP 1094
Query: 618 PSETPGP-RPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEA 660
+ P P P PA P +P E P+ A PT +EPA A
Sbjct: 1095 AAAVPTPEEPTSPAAAVP--TPEEPASPAAAVPTPEEPASPAAA 1136
Score = 44.7 bits (104), Expect = 3e-04
Identities = 40/171 (23%), Positives = 56/171 (32%), Gaps = 10/171 (5%)
Query: 508 TGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA 567
+ P+E P + + AG P + P E +P+ T
Sbjct: 927 SSPEETAPAVAAAITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGPVTPATTVHAPEE 986
Query: 568 GPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPRP 626
+P E P+ A PT +EP + P P P PA P P P
Sbjct: 987 PDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP-------PPEEP 1039
Query: 627 AGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
PA P +P E P+ A PT +EP A + +A P
Sbjct: 1040 TSPAAAVP--TPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1088
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 74.3 bits (181), Expect = 3e-13
Identities = 51/153 (33%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 505 EGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP 564
+G P++G P+E+P P P P P P P PA P E + P P P
Sbjct: 9 QGTAPPQDGE--QPAESPEPPPPWPP-------PPPPPAPPPAPPLLSEASPEPIPEPCP 59
Query: 565 RPA-GPAGDEPAESPSET-PGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETP 622
A GP + +ES +E P+P EPA P+ P P PA EPA P+ P
Sbjct: 60 ELAPGPCPEATSESATELYTEPTP------EPATEPASEPAPEPATEPAPEPATEPAPEP 113
Query: 623 GPRPAGPAGDEPAESPSETPGPSPAGPTRDEPA 655
P PA + EP P+ P PA E A
Sbjct: 114 APEPATESAPEPTPEPALESVPEPAPELTPEVA 146
Score = 72.0 bits (175), Expect = 2e-12
Identities = 54/165 (32%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 501 EEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPA-GPAGDEPAESPS 559
E+ E P P P P P PA P E + P P P A GP + +ES +
Sbjct: 18 EQPAESPEPPPPWPP--PPPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESAT 75
Query: 560 ET---PGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAE 616
E P P PA EPA P+ P P EPA P+ P P PA + EP
Sbjct: 76 ELYTEPTPEPATEPASEPAPEPATEPAP--------EPATEPAPEPAPEPATESAPEPTP 127
Query: 617 SPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAA 661
P+ P PA P +P P P+P T P EAA
Sbjct: 128 EPALESVPEPAPEL--TPEVAPELAPEPTPEPVTELAPEFCPEAA 170
Score = 59.3 bits (142), Expect = 1e-08
Identities = 46/150 (30%), Positives = 54/150 (36%), Gaps = 18/150 (12%)
Query: 518 PSETPGPSP--AGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPA 575
P PGP P + E P+ P PA EPA P+ P PA EPA
Sbjct: 59 PELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPA 118
Query: 576 ESPSETPGPSPAGPTRDEPAE------SPSETPGPRPAGPAGDEPAESPSETP--GPRPA 627
+ P P PA + EPA +P P P P P P P P PA
Sbjct: 119 TESAPEPTPEPALESVPEPAPELTPEVAPELAPEPTPEPVTELAPEFCPEAAPEFRPSPA 178
Query: 628 GPAGDEPAE--------SPSETPGPSPAGP 649
P + SPS +P PSP P
Sbjct: 179 PCLLQCPVDTRERGLKTSPSPSPSPSPRTP 208
Score = 54.7 bits (130), Expect = 3e-07
Identities = 45/150 (30%), Positives = 56/150 (37%), Gaps = 15/150 (10%)
Query: 486 APSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR 545
AP P+A SE+ E TE P P+ P PA EPA P+ P
Sbjct: 62 APGPCPEAT-SESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPA----PE 116
Query: 546 PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDE--PAESPSETPG 603
PA + EP P+ P PA E A + P P P E P +P P
Sbjct: 117 PATESAPEPTPEPALESVPEPAPELTPEVAPELAPEPTPEPVTELAPEFCPEAAPEFRPS 176
Query: 604 PRP--------AGPAGDEPAESPSETPGPR 625
P P G + + SPS +P PR
Sbjct: 177 PAPCLLQCPVDTRERGLKTSPSPSPSPSPR 206
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 73.9 bits (180), Expect = 4e-13
Identities = 107/369 (28%), Positives = 128/369 (34%), Gaps = 106/369 (28%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKG--GGRVDEGPQPRSVEPQDAGPL----ERSQGDEAG 367
G PG P GP +G G R D+GP R+ E GP E+ EAG
Sbjct: 805 GPPGPP-----------GPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAG 853
Query: 368 GHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTG 427
G PP PGPQ I L L G S+G G
Sbjct: 854 TAG------------------------PPGTPGPQGLLGAPGI-LGLPG---SRGE--RG 883
Query: 428 TQEVGGQ--DPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSP 485
V G +PG PLG AG A GA GSP
Sbjct: 884 LPGVAGAVGEPG--------PLGI---------------AGPPGARGPPGA-----VGSP 915
Query: 486 APSGHP-KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGP 544
+G P +AG N + GR +G PG E P GP G A P GP
Sbjct: 916 GVNGAPGEAGRDGNPGNDGPPGR----DGQPGHKGERGYPGNIGPVGAAGAPGPHGPVGP 971
Query: 545 R----------PAGPAGDEPAESPSETPGPRP-AGPAGDEPAESPSETPG---------- 583
P+GP G A P GP+ G G+ + P PG
Sbjct: 972 AGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGL 1031
Query: 584 PSPAGPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPGP-RPAGPAGDEPAESPSET 641
P AG D+ A GPR PAGP+G + + PG PAG G + + P+
Sbjct: 1032 PGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGP 1091
Query: 642 PG-PSPAGP 649
PG P P GP
Sbjct: 1092 PGPPGPPGP 1100
Score = 67.4 bits (163), Expect = 4e-11
Identities = 93/291 (31%), Positives = 115/291 (39%), Gaps = 39/291 (13%)
Query: 398 EPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDP----GEAVQPCRQPLGARVAD 453
EPGP + S+ E G A QG +E G + P G A P P G R +
Sbjct: 347 EPGP-AGSKGESGNKGEPGSAGPQGPPGPSGEE-GKRGPNGEAGSAGPP--GPPGLRGSP 402
Query: 454 KVRKRRKVDEGAGDSAAVASGGAQTLA-LAGSPAPSGHP-KAGHSENGVEEDTEGRTGP- 510
R D AG S GA A + G +G P + G + G GP
Sbjct: 403 GSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPA 462
Query: 511 -KEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPRPA- 567
KEG G P P P GPAG PGP+ P G G + + G R A
Sbjct: 463 GKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAP 522
Query: 568 GPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPG----PRPAGPAGD--EPAES--PS 619
GP G+ A+ P P P G + + P PG P P+GPAG+ +P E
Sbjct: 523 GPDGNNGAQGP-----PGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHG 577
Query: 620 ETPGPRPAGPAGDE--PAESPSETP-------GPS-PAGP--TRDEPAKAG 658
E P PAGP G+ P ES + P GPS P GP + EP G
Sbjct: 578 EFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVG 628
Score = 65.5 bits (158), Expect = 2e-10
Identities = 107/414 (25%), Positives = 138/414 (33%), Gaps = 74/414 (17%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKG--GGRVDEGPQPRSVEPQD 354
P +P P+ + G G+P S G +KG G +GP S E
Sbjct: 326 PRGIPGPVGAAGATGARGLVGEPGPAGSK-----GESGNKGEPGSAGPQGPPGPSGEEGK 380
Query: 355 AGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIA--- 411
GP EAG G P L + R PG + AS +
Sbjct: 381 RGP-----NGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPN 435
Query: 412 -----------LNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCR-QPLGAR-----VADK 454
+ G S G++ +E PG +P P GAR +
Sbjct: 436 GDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFP 495
Query: 455 VRKRRKVDEGA-GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEG 513
K D G GD GA+ G+P P G+ A + +G G ++G
Sbjct: 496 GPKGPTGDPGKNGDKGHAGLAGAR-----GAPGPDGNNGAQGPPG--PQGVQGGKG-EQG 547
Query: 514 TPGSPSETPGPSPAGPAGD--EPAESP--SETPGPRPAGPAGDEPAESPSETPGPRPAGP 569
PG P P P+GPAG+ +P E E P PAGP G+ P E+ P GP
Sbjct: 548 PPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGP--PGESGAAGPTGP 605
Query: 570 AGDEPAESPSETPG----PSPAGPTRDEPAESPSETPGPRPAG----------------- 608
G P G P G PS PG R A
Sbjct: 606 IGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGE 665
Query: 609 ---PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGE 659
P D +P P PAG GD E+ + P PAGP R P + GE
Sbjct: 666 IGNPGRDGARGAPGAVGAPGPAGATGDR-GEAGAAGPA-GPAGP-RGSPGERGE 716
Score = 63.9 bits (154), Expect = 5e-10
Identities = 65/204 (31%), Positives = 76/204 (37%), Gaps = 32/204 (15%)
Query: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP 542
G+P G P A ENG T G+TG + G PG P PAG G + + P
Sbjct: 193 GAPGVKGEPGAP-GENG----TPGQTGAR-GLPGERGRVGAPGPAGARGSDGSVGPVGPA 246
Query: 543 GP-RPAGPAGDEPAESP-SETPGPRPAGPAGDEPAESPSETPGPS-PAGPTRDEPAESPS 599
GP AGP G A P E AGPAG PG S P GP + A +
Sbjct: 247 GPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLT 306
Query: 600 ET---------------PGPR----PAGPAGDEPAESPSETPGPR----PAGPAGDEPAE 636
PGPR P G AG A PGP +G G+ +
Sbjct: 307 GAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSA 366
Query: 637 SPSETPGPSPAGPTRDEPAKAGEA 660
P PGPS R +AG A
Sbjct: 367 GPQGPPGPSGEEGKRGPNGEAGSA 390
Score = 63.2 bits (152), Expect = 8e-10
Identities = 67/211 (31%), Positives = 80/211 (37%), Gaps = 40/211 (18%)
Query: 481 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESP 538
L+G P G+P A NG+ +G G G PG P P P G AG A
Sbjct: 290 LSGPVGPPGNPGA----NGLT-GAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGL 344
Query: 539 SETPGPRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESP------SETPGP-----SP 586
PG PAG G+ + + GP+ P GP+G+E P + PGP SP
Sbjct: 345 VGEPG--PAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSP 402
Query: 587 A--------------GPTRDEPAESPSETPGPR-PAGPAGDEPAESPSETPG-PRPAGPA 630
GP A P+ GP AG G+ P PG P GPA
Sbjct: 403 GSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPA 462
Query: 631 GDE-PAESPSETPGPSPAGP--TRDEPAKAG 658
G E P P P P GP R EP G
Sbjct: 463 GKEGPVGLPGIDGRPGPIGPAGARGEPGNIG 493
Score = 59.3 bits (142), Expect = 1e-08
Identities = 103/368 (27%), Positives = 124/368 (33%), Gaps = 47/368 (12%)
Query: 312 EEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAG-------------PL 358
E G PG E+ G T GP S+G GP EP G P
Sbjct: 590 ERGPPG----ESGAAGPT-GPIGSRGPSG-PPGPDGNKGEPGVVGAVGTAGPSGPSGLPG 643
Query: 359 ERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSAS--EVEKIALNLEG 416
ER GG GE L + + PGP A+ E A G
Sbjct: 644 ERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAG 703
Query: 417 CALSQGSLRTGTQ-EVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGG 475
A +GS G + EVG P P GA + R G++ V G
Sbjct: 704 PAGPRGS--PGERGEVGPAGPNGFAGPA----GAAGQPGAKGERGAKGPKGENGVVGPTG 757
Query: 476 AQTLALAGSPAPSGHP-KAGHSENGVEEDTEGRTGP--KEGTPGSPSETPGPSPAGPAGD 532
+ AG P+G P AG +G G G + G PG + P P GPAG
Sbjct: 758 P--VGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGK 815
Query: 533 EPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSP--AGPT 590
E P G P G G+ A P G + GP+G+ P TPGP P
Sbjct: 816 EGLRGPRGDQG--PVGRTGEVGAVGPPGFAGEK--GPSGEAGTAGPPGTPGPQGLLGAPG 871
Query: 591 RDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAG-- 648
S E P AG G+ + PG R GP G SP P AG
Sbjct: 872 ILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGAR--GPPG--AVGSPGVNGAPGEAGRD 927
Query: 649 --PTRDEP 654
P D P
Sbjct: 928 GNPGNDGP 935
Score = 49.7 bits (117), Expect = 9e-06
Identities = 41/132 (31%), Positives = 48/132 (36%), Gaps = 9/132 (6%)
Query: 528 GPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPA 587
GPAGD PGP P D P P P P G G+ A+ + G P
Sbjct: 33 GPAGDRGPRGERGPPGP-PGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPG 91
Query: 588 GPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPA 647
P P P P G G PA P E P GPAG A P+ PG +
Sbjct: 92 PMGLMGPRGPPGAAGAPGPQGFQG--PAGEPGE---PGQTGPAG---ARGPAGPPGKAGE 143
Query: 648 GPTRDEPAKAGE 659
+P + GE
Sbjct: 144 DGHPGKPGRPGE 155
Score = 48.1 bits (113), Expect = 3e-05
Identities = 49/156 (31%), Positives = 55/156 (35%), Gaps = 19/156 (12%)
Query: 497 ENGVEEDTEGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEP 554
E V + G GP+ G PG P P GP G P PGP G
Sbjct: 27 EETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPG------PPGPPGPPGLGGNFAAQ 80
Query: 555 AESPSETPGPRPAGPAGDEPAESPSETPGPSPAG--PTRDEPAESPSETPGPR----PAG 608
+ GP P G G P P P P G EP E P +T GP PAG
Sbjct: 81 YDGKGVGLGPGPMGLMG--PRGPPGAAGAPGPQGFQGPAGEPGE-PGQT-GPAGARGPAG 136
Query: 609 PAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPG 643
P G + PG P G G + A TPG
Sbjct: 137 PPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPG 172
Score = 47.8 bits (112), Expect = 3e-05
Identities = 57/198 (28%), Positives = 71/198 (35%), Gaps = 37/198 (18%)
Query: 483 GSPAPSGHPKAGHSEN--------GVEEDTEGRTGPKEGTPGSPSETPGPS----PAGPA 530
G P P G P G + G+ G GP+ G PG+ PGP PAG
Sbjct: 63 GPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPR-GPPGAAG-APGPQGFQGPAGEP 120
Query: 531 GDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-PSPAG 588
G+ P+ GP P G AG++ PG R G G + A TPG P G
Sbjct: 121 GEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGER--GVVGPQGARGFPGTPGLPGFKG 178
Query: 589 PTRDEPAESPSETPGPRPAGPAGDEPAESPSETPG----------------PRPAGPAGD 632
+ PG G G+ A + TPG P PAG G
Sbjct: 179 IRGHNGLDGLKGQPGA--PGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGS 236
Query: 633 EPAESPSETPGP-SPAGP 649
+ + P GP AGP
Sbjct: 237 DGSVGPVGPAGPIGSAGP 254
Score = 45.1 bits (105), Expect = 2e-04
Identities = 54/165 (32%), Positives = 65/165 (39%), Gaps = 20/165 (12%)
Query: 506 GRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPG--PRPAGPAGDEPAESPSETPG 563
GR G ++G G P P P G G+ A+ + G P P G G P P
Sbjct: 51 GRDG-EDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMG--PRGPPGAAGA 107
Query: 564 PRP---AGPAGDEPAESPSETPGPS----PAGPTRDEPAESPSETPG-PRPAGPAGDEPA 615
P P GPAG EP E P +T GP+ PAGP + PG P G G + A
Sbjct: 108 PGPQGFQGPAG-EPGE-PGQT-GPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGA 164
Query: 616 ESPSETPG-PRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGE 659
TPG P G G + PG A + EP GE
Sbjct: 165 RGFPGTPGLPGFKGIRGHNGLDGLKGQPG---APGVKGEPGAPGE 206
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 73.9 bits (180), Expect = 4e-13
Identities = 99/356 (27%), Positives = 125/356 (35%), Gaps = 46/356 (12%)
Query: 312 EEGSPGDPDHEASTQGRTC-GPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEA-GGH 369
E GSPG P R GP S G + GP S P GP + A G
Sbjct: 862 ERGSPGGPGAAGFPGARGLPGPPGSNG----NPGPPGPSGSPGKDGPPGPAGNTGAPGSP 917
Query: 370 GEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQ 429
G P+ + + +K + PP PGP L + G ++G G
Sbjct: 918 GVSGPKGDAGQPGEKGS---PGAQGPPGAPGP----------LGIAGITGARGL--AGPP 962
Query: 430 EVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSG 489
+ G Q + G A+ + R G + G G+P G
Sbjct: 963 GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEP--GRDGNPGSDG 1020
Query: 490 HPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGP-SPAGPAGDEPAESPSETPGPRPA- 547
P S G + E + G PG P PGP PAG +GD P+ GP A
Sbjct: 1021 LPGRDGSPGGKGDRGENGSPGAPGAPGHPGP-PGPVGPAGKSGDRGESGPA---GPAGAP 1076
Query: 548 GPAGDEPAESPSETPGPR-PAGPAGDEPAES-------PSETPGPSPAGPTRDEPAESPS 599
GPAG A P GPR G G+ A P P GP + A
Sbjct: 1077 GPAGSRGAPGPQ---GPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSP 1133
Query: 600 ETPGPR-PAGPAGDEPAESPSETPGP-RPAGPAGDEPAESPSETPG----PSPAGP 649
GPR P GP+G + S PGP P GP G+ +PG P P GP
Sbjct: 1134 GPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGP 1189
Score = 67.8 bits (164), Expect = 3e-11
Identities = 69/226 (30%), Positives = 82/226 (36%), Gaps = 36/226 (15%)
Query: 472 ASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGR-TGPKEGTPGSPSETPGPSPAGPA 530
A G A AG P G P G G+ G + K G PGS E+ P P GP+
Sbjct: 511 APGPAGPRGAAGEPGRDGVP-GGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPS 569
Query: 531 GDEPAESPSETPGPRP-----------AGPAGDEPAESPSET--PGPR----PAGPAGDE 573
G PGP+ GP G P P + GP+ P GP GD+
Sbjct: 570 GPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDK 629
Query: 574 PAESPSETPGPSPAGPTRDEPAES--PSETPGPR-----PAGPAGDEPAESPSE------ 620
P G T P E+ P E PGP+ P P G A +P E
Sbjct: 630 GDTGPPGPQGLQGLPGTGGPPGENGKPGE-PGPKGDAGAPGAPGGKGDAGAPGERGPPGL 688
Query: 621 --TPGPR-PAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAEL 663
PG R AGP G E + + PGP A T GE L
Sbjct: 689 AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGL 734
Score = 67.8 bits (164), Expect = 3e-11
Identities = 108/369 (29%), Positives = 127/369 (34%), Gaps = 65/369 (17%)
Query: 313 EGSPGDPDHEASTQGRTC--GPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHG 370
+G PG P + + GR GP +G V P P+ D P + E GG G
Sbjct: 548 DGKPGPPGSQGES-GRPGPPGPSGPRGQPGVMGFPGPKG---NDGAP---GKNGERGGPG 600
Query: 371 EDRPEPLSPKESKKRKLELSRREQP-PTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQ 429
P+ K E + P PT PG L+G GT
Sbjct: 601 GPGPQGPPGKNG-----ETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLP--------GT- 646
Query: 430 EVGGQDPGEAVQPCRQ-PLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPS 488
G PGE +P P G A G GD+ A G LAG+P
Sbjct: 647 ---GGPPGENGKPGEPGPKGDAGAPGA------PGGKGDAGAPGERGPP--GLAGAPGLR 695
Query: 489 GHPKAGHSENGVEEDTEGRTGPK--EGTPG---SPSETPGPSPAGPAGDEPAESPSETPG 543
G E G + G GP GTPG P E G GP GD+ E G
Sbjct: 696 GGAGPPGPEGG--KGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDK-----GEPGG 748
Query: 544 PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPG-PSPAGPTRDEPAESPSET 601
P G G + P+ GP PAG GD + PG P AGP R P E ET
Sbjct: 749 PGADGVPGKDGPRGPTGPIGPPGPAGQPGD---KGEGGAPGLPGIAGP-RGSPGER-GET 803
Query: 602 PGPRPAG----------PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTR 651
P PAG P G +P E P G AG P+ PGP R
Sbjct: 804 GPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGER 863
Query: 652 DEPAKAGEA 660
P G A
Sbjct: 864 GSPGGPGAA 872
Score = 66.6 bits (161), Expect = 7e-11
Identities = 63/204 (30%), Positives = 81/204 (39%), Gaps = 31/204 (15%)
Query: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP 542
G+P +G P G E G + +G GP PG G PAGP G + + +P
Sbjct: 813 GAPGQNGEP-GGKGERGAPGE-KGEGGP----PGVAGPPGGSGPAGPPGPQGVKGERGSP 866
Query: 543 G-------------PRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGP-SPA 587
G P P G G+ PS +PG P GPAG+ A GP A
Sbjct: 867 GGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDA 926
Query: 588 GPTRDEPAESPSETPG-PRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPS 645
G ++ + PG P P G AG A + PG P P G G + + S PG +
Sbjct: 927 GQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGAN 986
Query: 646 -------PAGPTRDEPAKAGEAAE 662
P GP + P AG A E
Sbjct: 987 GLSGERGPPGP-QGLPGLAGTAGE 1009
Score = 64.7 bits (156), Expect = 3e-10
Identities = 72/249 (28%), Positives = 86/249 (34%), Gaps = 54/249 (21%)
Query: 470 AVASGGAQTLALAGSPAPSGH-----PKAGHSENGVE--EDTEGRTGPKEGTPGSPSET- 521
A A+G AG P +G P+ E G+ +G G K+G+PG P
Sbjct: 419 AGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDG-KDGSPGEPGANG 477
Query: 522 -PGPS----------PAGPAGDEPAESPS-ETPGPRPAGPAG--DEPAES---------- 557
PG + PAGP G + P+ E P PAGP G EP
Sbjct: 478 LPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRG 537
Query: 558 -PSETPGPRPAGPAGDEPAESPSETPG-PSPAGPTRDEPAESPSETP------------- 602
P GP G G ++ S PG P P+GP R +P P
Sbjct: 538 MPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGP-RGQPGVMGFPGPKGNDGAPGKNGER 596
Query: 603 ----GPRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPSPAGPTRDEPAKA 657
GP P GP G P PGP P G GD P G G E K
Sbjct: 597 GGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKP 656
Query: 658 GEAAELQDA 666
GE DA
Sbjct: 657 GEPGPKGDA 665
Score = 64.3 bits (155), Expect = 3e-10
Identities = 68/235 (28%), Positives = 81/235 (34%), Gaps = 53/235 (22%)
Query: 464 GAGDSAAVASGGAQTLALA-GSPAPSGHPKAGHSENGVEE----DTEGRTGP-------- 510
G G+ GA L A G P P+G A G E +G GP
Sbjct: 394 GKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAG 453
Query: 511 ------------KEGTPGSPSETPGPSPAGPAGDEPAESPSETPG-PRPAGPAGDEPAES 557
K+G+PG P P AG G P+ G P GPAG+ A
Sbjct: 454 IPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPG 513
Query: 558 PSETPGPRPAGPAGDEPAESPSETPG-----PSPAGPTRD---EPAESPSETPGPRPAGP 609
P+ GPR G AG+ + PG SP GP D P S E+ P P GP
Sbjct: 514 PA---GPR--GAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGP 568
Query: 610 AGDEPAESPSETPGPR--------------PAGPAGDEPAESPSETPGPSPAGPT 650
+G PGP+ P GP P ET P GPT
Sbjct: 569 SGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPT 623
Score = 63.5 bits (153), Expect = 6e-10
Identities = 102/389 (26%), Positives = 129/389 (33%), Gaps = 67/389 (17%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDR 373
GSPG + G K G R GP P AG GD+ G
Sbjct: 735 GSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIG---PPGPAG----QPGDKGEGGAPGL 787
Query: 374 PEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGG 433
P P+ S + E PGP A G +G ++ G
Sbjct: 788 PGIAGPRGSPGERGETG-------PPGPAGFPG----APGQNGEPGGKGERGAPGEKGEG 836
Query: 434 QDPGEAVQPCRQ-PLGARVADKVRKRRKVDEGAGDSAAVASGGAQ----TLALAGSPAPS 488
PG A P P G V+ R G G + + G + G P PS
Sbjct: 837 GPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPS 896
Query: 489 GHP----KAGHSENGVEEDTEGRTGPK--------EGTPGSPSETPGPSPAGPAGDEPAE 536
G P G + N + G +GPK +G+PG+ P P G AG A
Sbjct: 897 GSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGAR 956
Query: 537 SPSETPG-PRPAGPAGDEPAESPSETPGPR-------PAGPAG--------DEPAES--- 577
+ PG P P G G + + S PG P GP G EP
Sbjct: 957 GLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNP 1016
Query: 578 -----PSETPGPSPAGPTRDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPRPAGPAG 631
P P G + + PG P P GP G PA + PAGPAG
Sbjct: 1017 GSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVG--PAGKSGDRGESGPAGPAG 1074
Query: 632 DEPAESPSETPG-PSPAGPTRDEPAKAGE 659
A P+ + G P P GP R + + GE
Sbjct: 1075 ---APGPAGSRGAPGPQGP-RGDKGETGE 1099
Score = 58.5 bits (140), Expect = 2e-08
Identities = 72/251 (28%), Positives = 80/251 (31%), Gaps = 78/251 (31%)
Query: 467 DSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSP 526
DS V SG A LAG P P+G P G GP GT G P P
Sbjct: 156 DSYDVKSGVAVG-GLAGYPGPAGPP--------------GPPGPP-GTSGHPGSPGSPGY 199
Query: 527 AGPAGDEPAESPSETPGPR----PAGPAGDEPAESPSETPGPRPA-------GPAG---- 571
GP G+ PS PGP P+GPAG + PG R GPAG
Sbjct: 200 QGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGF 259
Query: 572 -------------DEPAES-----------PSETPGPSPAGPTRDEPAESPSETPG-PRP 606
E E+ P E P P GP R P E PG P
Sbjct: 260 PGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGP-RGAPGERGR--PGLPGA 316
Query: 607 AGPAGDEPAESPSETPGPR-------------------PAGPAGDEPAESPSETPGPSPA 647
AG G++ A PGP PAG G A PGP
Sbjct: 317 AGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGH 376
Query: 648 GPTRDEPAKAG 658
+ P G
Sbjct: 377 AGAQGPPGPPG 387
Score = 57.4 bits (137), Expect = 4e-08
Identities = 62/204 (30%), Positives = 76/204 (37%), Gaps = 30/204 (14%)
Query: 481 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE 540
+ G P GH + NG + +T G G K G G P E P P GP G A
Sbjct: 256 IPGFPGMKGH-RGFDGRNGEKGET-GAPGLK-GENGLPGENGAPGPMGPRG---APGERG 309
Query: 541 TPG-PRPAGPAGDEPAESPSETPGPR-PAGPAGDEPAES------PSETPGPSPAGPTRD 592
PG P AG G++ A PGP P G AG + P+ +PG + A R
Sbjct: 310 RPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRG 369
Query: 593 EP-------AESPSETPGPRPAGPAGDEPAESPSETPGPR-------PAGPAGDEPAESP 638
EP A+ P PG G G + P+ PG P GPAG A
Sbjct: 370 EPGPQGHAGAQGPPGPPGIN--GSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGL 427
Query: 639 SETPGPSPAGPTRDEPAKAGEAAE 662
G + EP GE E
Sbjct: 428 RGGAGEPGKNGAKGEPGPRGERGE 451
Score = 53.1 bits (126), Expect = 8e-07
Identities = 50/178 (28%), Positives = 59/178 (33%), Gaps = 22/178 (12%)
Query: 505 EGRTGPK--EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETP 562
+G GPK G PG P P G G + P P GP P +
Sbjct: 102 QGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVK 161
Query: 563 G----------PRPAGPAGDEPAESPSETPG----PSPAGPTRDEPAESPSETPGP---- 604
P PAGP G S PG P GP + PS PGP
Sbjct: 162 SGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAI 221
Query: 605 RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAE 662
P+GPAG + PG R G G + P+ PG R + GE E
Sbjct: 222 GPSGPAGKDGESGRPGRPGER--GLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGE 277
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 73.2 bits (178), Expect = 8e-13
Identities = 99/379 (26%), Positives = 135/379 (35%), Gaps = 54/379 (14%)
Query: 343 EGPQPR--SVEPQDAGPLERSQGDEAGGHGEDRP-----EPLSPKESK---KRKLELS-R 391
+ P P SV PQ P + G G D P P+SP E+ + L
Sbjct: 792 DSPSPLGVSVSPQTKRPPTKK-----GSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGS 846
Query: 392 REQP-----PTEPGPQSASEVEKIA-LNLEGCALSQGSLRT-GTQEVGGQDPGEAVQ-PC 443
++ P PT P P+ A + L+ +G L T + G A P
Sbjct: 847 KDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPK 906
Query: 444 RQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEED 503
+ P + + +K R G A+ + GA T A P+P G P +
Sbjct: 907 QAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPP 966
Query: 504 TEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR--PAGPAGDEPAE--SPS 559
PK G P +PS P+P P P+ TP P+ P PA P+ SP+
Sbjct: 967 AATPPSPKGG-PATPSPKGAPTPPAATPPSPKGGPA-TPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 560 ETPGPRPAG--PAGDEPAE--SPSETPGPS----------------PAGPTRDEPAESPS 599
TP P+ A PA P+ SP+ TP P PA P+ P+
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPA 1084
Query: 600 ETPGPRPAGPAGDEPAESP---SETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAK 656
TP GPA P +P + TP P P G P + TP +P P
Sbjct: 1085 ATPPSPKGGPATPSPKGAPMPPAATP-PSPKGGLATPPHKGAPTTPAATPPSPKGGLATP 1143
Query: 657 AGEAAELQDAEVESSAKSG 675
+ A A S K G
Sbjct: 1144 PPKGAPTTPAATPPSPKGG 1162
Score = 72.4 bits (176), Expect = 1e-12
Identities = 95/375 (25%), Positives = 133/375 (35%), Gaps = 71/375 (18%)
Query: 347 PRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPG------ 400
P+ +D+G + + D P PL S + K +PPT+ G
Sbjct: 767 PKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTK-------RPPTKKGSAGPDT 819
Query: 401 ----------PQSASEVEKIALNLEGCALSQGSLRTGT--QEVGGQDP---------GEA 439
P AS + + +L+ +G S + + T G P G
Sbjct: 820 PIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVT 879
Query: 440 VQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENG 499
+ P P + V K + A++ + +PAP G P +
Sbjct: 880 LPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPAS------ 933
Query: 500 VEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPS 559
PK G P P+ TP GPA P +P+ P P P G SP
Sbjct: 934 --------PSPK-GAPTPPAATPPSPKGGPATPSPKWAPTP-PAATPPSPKGGPATPSPK 983
Query: 560 ETPGPRPAGPAGDE--PAESPSETPGPSPAGPTRDEPAESPSETPGPRPAG--PAGDEPA 615
P P A P + PA +PS P+P T P SP+ TP P+ A PA P+
Sbjct: 984 GAPTPPAATPPSPKGGPA-TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPS 1042
Query: 616 E--SPSETPGPR--PAGPAGDEPA-----ESPSETPGPSPAGPTRDEPAKAGEA------ 660
SP+ TP P+ P PA P+ +PS P+P T P K G A
Sbjct: 1043 PKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSP-KGGPATPSPKG 1101
Query: 661 AELQDAEVESSAKSG 675
A + A S K G
Sbjct: 1102 APMPPAATPPSPKGG 1116
Score = 68.6 bits (166), Expect = 2e-11
Identities = 62/221 (28%), Positives = 80/221 (36%), Gaps = 21/221 (9%)
Query: 466 GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS 525
G A + GA T P+P G P A +G + P TP SP +P +
Sbjct: 998 GGPATPSPKGAPTPPAVTPPSPKGSPAA-------TPFPKGASTPPAATPPSPKGSPAAT 1050
Query: 526 PAGPAGDEPAESPSETPGPR--PAGPAGDEPAESPSETPGPRPAGPAGDEPAESP---SE 580
P P G P + P P+ PA P+ P+ TP GPA P +P +
Sbjct: 1051 PL-PKG-APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAA 1108
Query: 581 TPGPSPAGPTRDEPAESPSETPGPRPAGPAGD---EPAESPSETPGPRPAGPAGD---EP 634
TP PSP G P + TP P P G P + TP P P G P
Sbjct: 1109 TP-PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPP 1167
Query: 635 AESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSG 675
+ TP +P P + + A A S K G
Sbjct: 1168 PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1208
Score = 67.8 bits (164), Expect = 3e-11
Identities = 91/383 (23%), Positives = 112/383 (29%), Gaps = 58/383 (15%)
Query: 313 EGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGED 372
+G P P + + P KGG P+ P P + G
Sbjct: 928 KGIPASPSPKGAPTPPAATPPSPKGGPATPS-PKWAPTPPAATPPSPKGGPATPSPKGAP 986
Query: 373 RPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVG 432
P +P K P P P+ A + +GS G
Sbjct: 987 TPPAATPPSPKGG----------PATPSPKGAPTPPAVTP-----PSPKGSPAATPFPKG 1031
Query: 433 GQDPGEAVQPCRQPLGARVADKVRKRRKVDEGA------GDSAAVASGGAQTLALAGSPA 486
P A P P G+ A + K A G A + GA T A P+
Sbjct: 1032 ASTPPAATPP--SPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPS 1089
Query: 487 PSGHPKAGHSENGVEEDTEGR---------TGPKEGTPGSPSETPGPSPAGPAGDEPAES 537
P G P A S G T P +G P +P+ TP PSP G P +
Sbjct: 1090 PKGGP-ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP-PSPKGGLATPPPKG 1147
Query: 538 PSETPGPRPAGPAGD---EPAESPSETPGPRPAGPAGDEPAESPSETPG------PSPAG 588
TP P P G P + TP P P G SP P PSP G
Sbjct: 1148 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1207
Query: 589 PTRDEPAESPSETPGPRPAGPAGDEPAESPS---ETPGPRPAGPAGDE-----------P 634
+ TP P P G SP TP P P G P
Sbjct: 1208 GLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPP 1267
Query: 635 AESPSETPGPSPAGPTRDEPAKA 657
A +P G P + P A
Sbjct: 1268 AATPPSLKGGLATPPHKGAPNPA 1290
Score = 65.5 bits (158), Expect = 2e-10
Identities = 96/400 (24%), Positives = 124/400 (31%), Gaps = 45/400 (11%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAG 356
P P P + +G P P + + P KGG P P+ A
Sbjct: 936 PKGAPTP-PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPAT---PSPKGAPTPPAA 991
Query: 357 PLERSQGDEAGGHGEDRPEPL-----SPKESKK-----RKLELSRREQPPTEPGPQSASE 406
+G A + P P SPK S + PP+ G +A+
Sbjct: 992 TPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATP 1051
Query: 407 VEKIALNLEGCALSQGSLRTGTQEV-GGQDPGEAVQPCRQPLGARVADK---VRKRRKVD 462
+ K A L T + G P A P + A + K +
Sbjct: 1052 LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPP 1111
Query: 463 EGAGDSAAVASGGAQTLALAGSPAPSGH-----PKAGHSENGVEEDTEG---RTGPKEGT 514
G A GA T A P+P G PK + + T P +G
Sbjct: 1112 SPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGA 1171
Query: 515 PGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPS---ETPGPRPAGPAG 571
P +P+ TP PSP G + TP P P G SP TP P P G
Sbjct: 1172 PTTPAATP-PSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230
Query: 572 DEPAESPS---ETPGPSPAGPTRDEPAESPSETPGPRPAGPAG---------DEPAESPS 619
SP TP +P P P P P A P + A +P+
Sbjct: 1231 GLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPA 1290
Query: 620 ETPGPRP-AGPAGDEP--AESPSETPGPSPAGPTRDEPAK 656
P P GPA P A +P PSP G P K
Sbjct: 1291 VVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK 1330
Score = 64.3 bits (155), Expect = 3e-10
Identities = 53/185 (28%), Positives = 66/185 (35%), Gaps = 20/185 (10%)
Query: 484 SPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPG 543
+P+P G P + + PK G P +P+ TP PSP G + TP
Sbjct: 1188 TPSPKGAPTTPAATPPSPKGGLATPSPK-GAPTTPAATP-PSPKGGLATPSPKGAPTTPA 1245
Query: 544 PRPAGPAGDEPAESPSETPGPRPAGPAG---------DEPAESPSETPGPSPAGPTRDEP 594
P P G P P P A P + A +P+ PSP G P
Sbjct: 1246 ATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP 1305
Query: 595 ---AESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDE--PAESPSETPGP----S 645
A +P P P G G P + P P P G PA +PS GP S
Sbjct: 1306 PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSS 1365
Query: 646 PAGPT 650
GPT
Sbjct: 1366 KEGPT 1370
Score = 62.4 bits (150), Expect = 1e-09
Identities = 66/225 (29%), Positives = 79/225 (35%), Gaps = 60/225 (26%)
Query: 466 GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETP--- 522
G A + GA T A P+P G P T P +G P P+ TP
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPA---------------TPPPKGAPTPPAATPPSL 1274
Query: 523 -----------GPSPA---------GPAGDEP--AESPSETPGPRPAGPAGDEPAESPSE 560
P+PA GPA P A +P P P G G P +
Sbjct: 1275 KGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPT 1334
Query: 561 TPGPRPAGPAGDE--PAESPSETPGP----SPAGPTRDEPAESPSETPGPR------PAG 608
P P P G PA +PS GP S GPT PA +PS GP G
Sbjct: 1335 PPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPT--PPAATPSHKGGPAMTPPSPKRG 1392
Query: 609 PAGDEPAESPSE------TPGPRPAGPAGDEPAESPSETPGPSPA 647
PA P P+ +P PA P E A +PS+ PA
Sbjct: 1393 PAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPA 1437
Score = 61.2 bits (147), Expect = 3e-09
Identities = 69/216 (31%), Positives = 82/216 (37%), Gaps = 45/216 (20%)
Query: 466 GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS 525
G A GA T A P+P G P T P +G P P+ TP PS
Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPKGSPG---------------TPPPKGAPTPPAVTP-PS 1342
Query: 526 PAGPAGDEPAESPSETPGPR-PAGPAGDEP-AESPSETPGPR------PAGPAGDEPAES 577
P G PA +PS GP P+ G P A +PS GP GPA P
Sbjct: 1343 PKGTP-TLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGD 1401
Query: 578 PSE------TPGPSPAGPTRDEPAESPSE--------TPGPRPAGPAGDEPAESPSETPG 623
P+ +P +PA P E A +PS+ TP PA P P+ TP
Sbjct: 1402 PTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPA-TPS 1460
Query: 624 PR--PAGPAGDEPAESPSETPGPSPAGPTRDEPAKA 657
+ P PA P SP E P P T P KA
Sbjct: 1461 SKGDPTLPAVTPP--SPKEPPAPKQVA-TSSSPKKA 1493
Score = 59.7 bits (143), Expect = 9e-09
Identities = 54/195 (27%), Positives = 68/195 (34%), Gaps = 13/195 (6%)
Query: 466 GDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEG----TPGSPSET 521
G A + GA T A P+P G + PK G +P T
Sbjct: 1184 GGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1243
Query: 522 PGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPA-ESPSETPGPRPAGPAGDEPAESPSE 580
P +P P G P P P A P + +P P PA P P+
Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT 1303
Query: 581 TP---GPSPAGPTRDEPAESPSETPGPR--PAGPAGDEPAESPSETPGPRPAGPAGDEPA 635
+P P+P T P SP TP P+ P PA P SP TP P+
Sbjct: 1304 SPPKGAPTPPAATPPSPKGSPG-TPPPKGAPTPPAVTPP--SPKGTPTLPATTPSSKGGP 1360
Query: 636 ESPSETPGPSPAGPT 650
+PS GP+P T
Sbjct: 1361 TTPSSKEGPTPPAAT 1375
Score = 52.8 bits (125), Expect = 1e-06
Identities = 100/430 (23%), Positives = 142/430 (33%), Gaps = 61/430 (14%)
Query: 297 PSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKG------------GGRVD-- 342
P P P + +GSPG P + + P KG GG
Sbjct: 1306 PKGAPTP-PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPS 1364
Query: 343 --EGPQPRSVEPQDAGPLERSQGDEAGGHGEDRP--EPLSPKESKKRKLELSRREQPPTE 398
EGP P + P G + G P +P SP + LS ++ P T
Sbjct: 1365 SKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAV-----IPLSPKKAPATP 1419
Query: 399 PGPQSASEVEKIALNLEGCALSQGSLR----TGTQEVGGQDP---GEAVQPCRQPLGARV 451
+ A+ K +L A++ SL+ T + G P G+ P P +
Sbjct: 1420 VTREGAATPSKG--DLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKE 1477
Query: 452 ADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK 511
++ A A GA TL +P P S T K
Sbjct: 1478 PPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKK 1537
Query: 512 EGTPGSPSETPGPSPAGPAGDEPAESPS-ETPGPRPAGPAGDEPAESPSETPGPRPAGPA 570
TP + + P P ++P+ TP PA P+ E + P+ TP P+
Sbjct: 1538 --TPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPS 1595
Query: 571 GDE-------PAESPSETPGP---SPAGPTRDEPAESPSETPGPRPAGPAG--DEP---- 614
E + SP E P P +P P + +P TP P P+ D P
Sbjct: 1596 PKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPA 1655
Query: 615 -------AESPSETPG-PRPAGP-AGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQD 665
A P + G P GP A E +P+ P PTR P +A
Sbjct: 1656 SVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPP 1715
Query: 666 AEVESSAKSG 675
+ SAK+G
Sbjct: 1716 ICPDPSAKNG 1725
Score = 29.6 bits (65), Expect = 9.5
Identities = 36/148 (24%), Positives = 46/148 (31%), Gaps = 21/148 (14%)
Query: 510 PKEGTPGSPS-ETPGPSPAGPAGDEPAESPSET------PGPRPAGPAGDEPAESPSETP 562
P E T P+ E P P P S PGP P P + P
Sbjct: 2 PGEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAA 61
Query: 563 GPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETP 622
P+ A +P E P P + T P G A + P P+
Sbjct: 62 NQASPFPSPSTIASTPLEVPFPQSSSGT-------------ALPLGTAPEAPTFLPNLIG 108
Query: 623 GP-RPAGPAGDEPAESPSETPGPSPAGP 649
P PA A P +P+ PS + P
Sbjct: 109 PPISPAALALASPMIAPTLKGTPSSSAP 136
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 72.0 bits (175), Expect = 2e-12
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 485 PAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGP 544
P SG + G+ + V E T G GP+E G+P+ TP P + P +P TP
Sbjct: 23 PGESGG-RTGNWVSSVGEMT-GPYGPRE--MGTPTLTPSSPPTLTPSNTPTLTPCSTPTL 78
Query: 545 RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGP 604
P P+ +P+ TP P P +PS TP +P+ P+ +P+ TP
Sbjct: 79 TPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSS 138
Query: 605 RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSP 646
P P +PS TP P+ P+ +P+ TP +P
Sbjct: 139 TPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTP 180
Score = 65.9 bits (159), Expect = 1e-10
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 514 TPGS-PSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGD 572
TP S P+ T +P P +PS TP P+ P+ +P+ TP RP
Sbjct: 135 TPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSS 194
Query: 573 EPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGD 632
P +PS TP +P+ P +PS TP P+ P+ +P+ TP RP
Sbjct: 195 TPTLTPSSTPTLTPSST----PTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSS 250
Query: 633 EPAESPSETPGPSPA 647
P +PS TP +P+
Sbjct: 251 TPTLTPSSTPTLTPS 265
Score = 65.5 bits (158), Expect = 2e-10
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 514 TPGS-PSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGD 572
TP S P+ TP +P P +PS TP P+ P+ +P+ T P
Sbjct: 95 TPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSS 154
Query: 573 EPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGD 632
P +PS TP +P+ P+ +P+ TP RP P +PS TP P+
Sbjct: 155 TPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTL 214
Query: 633 EPAESPSETPGPSP 646
P+ +P+ P +P
Sbjct: 215 TPSNTPTLIPSSTP 228
Score = 65.1 bits (157), Expect = 2e-10
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 517 SPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAE 576
+P TP +P+ P+ +P+ TP P P +PS TP P+ P+
Sbjct: 79 TPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSS 138
Query: 577 SPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAE 636
+P+ T +P P +PS TP P+ P+ +P+ TP RP P
Sbjct: 139 TPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTL 198
Query: 637 SPSETPGPSPA 647
+PS TP +P+
Sbjct: 199 TPSSTPTLTPS 209
Score = 64.7 bits (156), Expect = 3e-10
Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 6/162 (3%)
Query: 486 APSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR 545
A HP A E+G GRTG + G + GP G P+ P+ TP
Sbjct: 14 AAKEHPMAVPGESG------GRTGNWVSSVGEMTGPYGPREMGTPTLTPSSPPTLTPSNT 67
Query: 546 PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPR 605
P P +P TP P+ P+ +P+ TP +P P +PS TP
Sbjct: 68 PTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLT 127
Query: 606 PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPA 647
P+ P+ +P+ T P P +PS TP +P+
Sbjct: 128 PSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPS 169
Score = 64.3 bits (155), Expect = 3e-10
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 517 SPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAE 576
+P+ TP +P P +PS TP P+ P+ +P+ TP P P
Sbjct: 91 TPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTL 150
Query: 577 SPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAE 636
+PS TP +P+ P+ +P+ TP P P + S TP P+ P+
Sbjct: 151 TPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSS 210
Query: 637 SPSETPGPSP 646
+P+ TP +P
Sbjct: 211 TPTLTPSNTP 220
Score = 63.9 bits (154), Expect = 5e-10
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 517 SPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAE 576
+PS TP +P+ P+ +P+ TP P P +PS TP P+ P+
Sbjct: 111 TPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSS 170
Query: 577 SPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAE 636
+P+ TP +P P + S TP P+ P+ +P+ TP P P
Sbjct: 171 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTL 230
Query: 637 SPSETPGPSPA 647
+PS TP +P+
Sbjct: 231 TPSSTPTLTPS 241
Score = 61.2 bits (147), Expect = 3e-09
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 21/177 (11%)
Query: 476 AQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGS-----PSETPGPSPAGPA 530
+ T L S P+ P + + T R+ TP S PS TP +P+
Sbjct: 113 SSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTP 172
Query: 531 GDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPT 590
P+ +P+ TP RP P +PS TP P+ P +PS TP P+
Sbjct: 173 TLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSST----PTLTPSNTPTLIPSSTP 228
Query: 591 RDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPA 647
P+ +P+ TP RP P +PS TP +PS TP +P+
Sbjct: 229 TLTPSSTPTLTPSSRPTLTRSSTPTLTPSSTP------------TLTPSSTPTLTPS 273
Score = 59.7 bits (143), Expect = 9e-09
Identities = 47/172 (27%), Positives = 67/172 (38%), Gaps = 7/172 (4%)
Query: 478 TLALAGSPA--PSGHPKAGHSENGVEEDTEGRTGPKEGTPG-SPSETPGPSPAGPAGDEP 534
TL +P PS P S + T TP +PS TP +P+ P
Sbjct: 77 TLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTP 136
Query: 535 AESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEP 594
+ +P+ T P P +PS TP P+ P+ +P+ TP P P
Sbjct: 137 SSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTP 196
Query: 595 AESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSP 646
+PS TP P+ P +PS TP P+ P+ +P+ TP P
Sbjct: 197 TLTPSSTPTLTPS----STPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRP 244
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 71.2 bits (173), Expect = 3e-12
Identities = 109/402 (27%), Positives = 142/402 (35%), Gaps = 52/402 (12%)
Query: 301 PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPL-E 359
P P + + E+G+PG P G P +GG D+G + P GP E
Sbjct: 644 PGPAGPAGERGEQGAPG-PSGFQGLPGPPGPP--GEGGKPGDQGVPGEAGAPGLVGPRGE 700
Query: 360 RSQGDEAGGHGEDR---PEPLSPKESKKRKLELSRREQPPTEPGPQSASEV--EKIALNL 414
R E G G P L S PP GP + E+ A +
Sbjct: 701 RGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGI 760
Query: 415 EGCALSQGSL-RTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVAS 473
G +G + G + G+D G + P G A+ + AG + A +
Sbjct: 761 AGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGA 820
Query: 474 GGAQTLALAGSPAPSGH--PKAGHSENGVEEDTEGRTGPK--EGTPG--SPSETPGPSP- 526
G + G P P+G P + G + + +G G K G PG PS PGP
Sbjct: 821 PGER--GETGPPGPAGFAGPPGADGQPGAKGE-QGEAGQKGDAGAPGPQGPSGAPGPQGP 877
Query: 527 ---AGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPRPAGPAG-DEPAESPSET 581
GP G A+ P G P AG G P S P P GP+G D P + ++
Sbjct: 878 TGVTGPKGARGAQGPPGATGFPGAAGRVG--PPGSNGNPGPPGPPGPSGKDGPKGARGDS 935
Query: 582 PGPSPAG-PTRDEPAESPSETPGPRPAGPAGDEPAESPSETPG----------------- 623
P AG P PA P E P GP+G E P G
Sbjct: 936 GPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFP 995
Query: 624 --PRPAGPAGDEPAESPSETPG-PSPAGPTRDEPAKAGEAAE 662
P P+G G + A S G P P GP P G A E
Sbjct: 996 GLPGPSGEPGKQGAPGASGDRGPPGPVGP----PGLTGPAGE 1033
Score = 67.8 bits (164), Expect = 3e-11
Identities = 109/399 (27%), Positives = 131/399 (32%), Gaps = 63/399 (15%)
Query: 312 EEGSPGD--PDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEA-GG 368
E GSPG P +GRT GP + G D P P P GP A G
Sbjct: 316 ENGSPGPMGPRGLPGERGRT-GPAGAAGARGNDGQPGPAG-PPGPVGPAGGPGFPGAPGA 373
Query: 369 HGEDRPEPLSPKESKKRKLELSRREQP--PTEPGPQSASEVEKIALNLEGCALSQGSLRT 426
GE P E + R +P P PGP AS +G ++GS
Sbjct: 374 KGEAGPTGARGPEGAQ-----GPRGEPGTPGSPGPAGASGNP----GTDGIPGAKGS--A 422
Query: 427 GTQEVGGQD--PGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGS 484
G + G PG P Q + K + G+ G Q G
Sbjct: 423 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQ--------TGEPGIAGFKGEQ--GPKGE 472
Query: 485 PAPSGHPKAGHSENGVEEDTEGRTGPKEGTP--GSPSETPGPSPAGPAGDEPAESPSETP 542
P P+G P+ G EE G G G G P E P G G + P P
Sbjct: 473 PGPAG-PQGAPGPAG-EEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAP 530
Query: 543 GPR-PAGPAGDEPAESPSETPG-------------PRPAGPAGDE-PAESPSETPGPSPA 587
G R P+G AG + A PG P AGP G P+ +P E P P
Sbjct: 531 GERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPP 590
Query: 588 GPTRDEPAESPSETPGPRPA----GPAGDEPAESP----------SETPGPRPAGPAGDE 633
GP PGP+ A G AG++ ET P GPAG
Sbjct: 591 GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPA 650
Query: 634 PAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSA 672
PGPS P GE + D V A
Sbjct: 651 GERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEA 689
Score = 66.2 bits (160), Expect = 9e-11
Identities = 77/279 (27%), Positives = 98/279 (35%), Gaps = 58/279 (20%)
Query: 436 PGEAVQPCRQPLGARVADKVRKRRKVDEGA-GDSAAVASGGAQTLALAGSPAPSGHP--K 492
PGE P + L R D + + GA G+ G Q G P G P K
Sbjct: 551 PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQ--GARGQPGVMGFPGPK 608
Query: 493 AGHSENGV--EEDTEGRTGPKEGTPGSPSETPGPSPAGPA------GDEPAESPSETPG- 543
+ E G E+ G G + G PG ET P GPA G++ A PS G
Sbjct: 609 GANGEPGKAGEKGLPGAPGLR-GLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGL 667
Query: 544 PRPAGPAGD--EPAES--PSETPGPRPAGPAGDEPAESPSETPGPS--------PAGPTR 591
P P GP G+ +P + P E P GP G+ +PG P P
Sbjct: 668 PGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGT 727
Query: 592 DEP--AESPSETPGPR-------------------PAGPAGDEPAESPSETPGP------ 624
D P A P+ PG + P G GD + P PG
Sbjct: 728 DGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGL 787
Query: 625 ----RPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGE 659
P GPAG + PGP+ + R P + GE
Sbjct: 788 TGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGE 826
Score = 65.1 bits (157), Expect = 2e-10
Identities = 106/381 (27%), Positives = 133/381 (34%), Gaps = 62/381 (16%)
Query: 309 KVEEEGSPGDPDHEA--STQGRT--CGPEHSKG--GGRVDEG-PQPRSVEPQDAGPLERS 361
K E+G PG P G T GP G G R ++G P P + P
Sbjct: 616 KAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPG 675
Query: 362 QGDEAGGHGEDRPEPLSPKESKKRKLELSRREQP-PTEPGPQSASEVEKIALNLEGCALS 420
+G + G G P E+ L R E+ P E G A ++ L G +
Sbjct: 676 EGGKPGDQGV-------PGEAGAPGLVGPRGERGFPGERGSPGAQGLQG-PRGLPGTPGT 727
Query: 421 QGSLRTGTQEVGGQDPGEAVQPCRQPL-----GARVADKVRKRRKVDEGAGDSAAVASGG 475
G G G PG P Q + A +A R V E + A GG
Sbjct: 728 DGP--KGASGPAGP-PGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGG 784
Query: 476 AQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK-----EGTPGSPSETPGPSPAGPA 530
G P P+G NG E+ G GP G PG ET P PAG A
Sbjct: 785 RGLTGPIGPPGPAG-------ANG-EKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFA 836
Query: 531 GDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGP 589
G A+ G + AG GD A P P GP+G + P+ GP A
Sbjct: 837 GPPGADGQPGAKGEQGEAGQKGDAGA--------PGPQGPSGAPGPQGPTGVTGPKGARG 888
Query: 590 TRDEPAESPSETPGPRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPG----- 643
+ P T P AG G + PG P P+G G + A S PG
Sbjct: 889 AQGPPGA----TGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEP 944
Query: 644 --PSPAGPTRDEPAKAGEAAE 662
PAGP P + GE +
Sbjct: 945 GLQGPAGP----PGEKGEPGD 961
Score = 64.3 bits (155), Expect = 3e-10
Identities = 77/265 (29%), Positives = 94/265 (35%), Gaps = 43/265 (16%)
Query: 435 DPGEAVQP-CRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQ-TLALAGSPAPSGHPK 492
+PGE +P P+G R + D AG G G P G P
Sbjct: 226 NPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPG 285
Query: 493 A-GHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSP------------AGPAGDEPAES 537
GH + +G G +G GSP E P P GPAG A
Sbjct: 286 VKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARG 345
Query: 538 PSETPGPR-PAGPAGDEPAESPSETPGPR----PAGPAGDEPAESPSETPG----PSPAG 588
PGP P GP G PG + P G G E A+ P PG P PAG
Sbjct: 346 NDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAG 405
Query: 589 PTRD------EPAESPSETPG-------PRPAGPAGDEPAESPSETPGPR-PAGPAGDEP 634
+ + A+ + PG P P GP G + A P G G AG +
Sbjct: 406 ASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKG 465
Query: 635 AESPSETPGPSPAGPTRDEPAKAGE 659
+ P PG PAGP + P AGE
Sbjct: 466 EQGPKGEPG--PAGP-QGAPGPAGE 487
Score = 62.4 bits (150), Expect = 1e-09
Identities = 65/224 (29%), Positives = 72/224 (32%), Gaps = 34/224 (15%)
Query: 462 DEGAGDSAAVASGGAQTLALAGSPAPSGHP-KAGHSENGVEEDTEGRTGPKEGTPGSPSE 520
++ G V G + G P P+G P G N E G +GP P
Sbjct: 189 EKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPM-----GPRG 243
Query: 521 TPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-------PRPAGPAGDE 573
PGP P P D A P + P GP G PG P G G+
Sbjct: 244 PPGP-PGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEA 302
Query: 574 PAE-------SPSETPGPSPAGPTRDEPAESPSETPG-----------PRPAGPAGD-EP 614
A SP E P P GP R P E P P PAGP G P
Sbjct: 303 GAPGVKGESGSPGENGSPGPMGP-RGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGP 361
Query: 615 AESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAG 658
A P P G AG A P GP T P AG
Sbjct: 362 AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAG 405
Score = 59.7 bits (143), Expect = 9e-09
Identities = 114/413 (27%), Positives = 141/413 (34%), Gaps = 115/413 (27%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKG--GGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGE 371
G+PG P GP G G R D GP R+ EP GP E G G+
Sbjct: 912 GNPGPPGPP--------GPSGKDGPKGARGDSGPPGRAGEPGLQGPA--GPPGEKGEPGD 961
Query: 372 DRPE----PLSPKESKKRK----LELSRREQP-PTEPGPQSASEVEKIALNLEGCALSQG 422
D P P P+ ++ L R E+ P PGP S ++ A G G
Sbjct: 962 DGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP-SGEPGKQGAPGASGDRGPPG 1020
Query: 423 SLRTGTQEVGGQDPGEAVQPCRQ-PLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLAL 481
+ +PG P P G A V+ R G++ AV + GA
Sbjct: 1021 PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDR------GETGAVGAPGAP--GP 1072
Query: 482 AGSPAPSGHPKAGHSENGVEEDTEGRTGPK-----------------EGTPGSPSET--- 521
GSP P+G P + G E +G GP +G G P E
Sbjct: 1073 PGSPGPAG-PTGKQGDRG-EAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLK 1130
Query: 522 --------------PGPS----PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 563
PGPS +GPAG P P P GP+G + A PG
Sbjct: 1131 GHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGP-----PGPVGPSGKDGANG---IPG 1182
Query: 564 P-RPAGPAGDEPAESPSETPG-PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSET 621
P P GP G P+ PG P P GP P P GP D A
Sbjct: 1183 PIGPPGPRGRSGETGPAGPPGNPGPPGP--------------PGPPGPGIDMSAF----- 1223
Query: 622 PGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKS 674
AG P E GP P R + A G DAEV+++ KS
Sbjct: 1224 --------AGLGPREK-----GPDPLQYMRADQAAGG--LRQHDAEVDATLKS 1261
Score = 59.3 bits (142), Expect = 1e-08
Identities = 63/217 (29%), Positives = 71/217 (32%), Gaps = 44/217 (20%)
Query: 483 GSPAPSGHPKAGHSENGVEEDT--EGRTGPK-----EGTPGSPSETPGPSPAGPAG---- 531
G P P G P G D +G GP+ GTPG+P P P GP G
Sbjct: 120 GPPGPQG-PAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGN 178
Query: 532 ---------DEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAE------ 576
DE A P GP G P+ PGP+ EP E
Sbjct: 179 FAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGP 238
Query: 577 -SPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPG-------PRPAG 628
P PGP P P D A P + P GP G PG P G
Sbjct: 239 MGPRGPPGP-PGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDG 297
Query: 629 PAGDEPAE-------SPSETPGPSPAGPTRDEPAKAG 658
G+ A SP E P P GP R P + G
Sbjct: 298 AKGEAGAPGVKGESGSPGENGSPGPMGP-RGLPGERG 333
Score = 55.1 bits (131), Expect = 2e-07
Identities = 63/219 (28%), Positives = 73/219 (33%), Gaps = 49/219 (22%)
Query: 506 GRTGPK--EGTPGS------PSETPGPS-PAG---PAGDEPAESPSETPGPR----PAGP 549
G+ GPK +G PG P PGP PAG P GD + PGPR G
Sbjct: 98 GQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGT 157
Query: 550 AGDEPAESPSETPGP----------------------------RPAGPAGDEPAESPSET 581
G+ P PGP P GP G P+
Sbjct: 158 PGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGA 217
Query: 582 PGPSPAGPTRDEPAESPSETP-GPR-PAGPAGDEPAESPSETPGPR-PAGPAGDEPAESP 638
PGP EP E P GPR P GP G + + PG GP G + A
Sbjct: 218 PGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGF 277
Query: 639 SETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSGKP 677
TPG R P G E V+ +SG P
Sbjct: 278 PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVK--GESGSP 314
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 71.2 bits (173), Expect = 3e-12
Identities = 109/402 (27%), Positives = 142/402 (35%), Gaps = 52/402 (12%)
Query: 301 PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPL-E 359
P P + + E+G+PG P G P +GG D+G + P GP E
Sbjct: 575 PGPAGPAGERGEQGAPG-PSGFQGLPGPPGPP--GEGGKPGDQGVPGEAGAPGLVGPRGE 631
Query: 360 RSQGDEAGGHGEDR---PEPLSPKESKKRKLELSRREQPPTEPGPQSASEV--EKIALNL 414
R E G G P L S PP GP + E+ A +
Sbjct: 632 RGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGI 691
Query: 415 EGCALSQGSL-RTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVAS 473
G +G + G + G+D G + P G A+ + AG + A +
Sbjct: 692 AGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGA 751
Query: 474 GGAQTLALAGSPAPSGH--PKAGHSENGVEEDTEGRTGPK--EGTPG--SPSETPGPSP- 526
G + G P P+G P + G + + +G G K G PG PS PGP
Sbjct: 752 PGER--GETGPPGPAGFAGPPGADGQPGAKGE-QGEAGQKGDAGAPGPQGPSGAPGPQGP 808
Query: 527 ---AGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPGPRPAGPAG-DEPAESPSET 581
GP G A+ P G P AG G P S P P GP+G D P + ++
Sbjct: 809 TGVTGPKGARGAQGPPGATGFPGAAGRVG--PPGSNGNPGPPGPPGPSGKDGPKGARGDS 866
Query: 582 PGPSPAG-PTRDEPAESPSETPGPRPAGPAGDEPAESPSETPG----------------- 623
P AG P PA P E P GP+G E P G
Sbjct: 867 GPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFP 926
Query: 624 --PRPAGPAGDEPAESPSETPG-PSPAGPTRDEPAKAGEAAE 662
P P+G G + A S G P P GP P G A E
Sbjct: 927 GLPGPSGEPGKQGAPGASGDRGPPGPVGP----PGLTGPAGE 964
Score = 67.8 bits (164), Expect = 3e-11
Identities = 109/399 (27%), Positives = 131/399 (32%), Gaps = 63/399 (15%)
Query: 312 EEGSPGD--PDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLERSQGDEA-GG 368
E GSPG P +GRT GP + G D P P P GP A G
Sbjct: 247 ENGSPGPMGPRGLPGERGRT-GPAGAAGARGNDGQPGPAG-PPGPVGPAGGPGFPGAPGA 304
Query: 369 HGEDRPEPLSPKESKKRKLELSRREQP--PTEPGPQSASEVEKIALNLEGCALSQGSLRT 426
GE P E + R +P P PGP AS +G ++GS
Sbjct: 305 KGEAGPTGARGPEGAQ-----GPRGEPGTPGSPGPAGASGNP----GTDGIPGAKGS--A 353
Query: 427 GTQEVGGQD--PGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGS 484
G + G PG P Q + K + G+ G Q G
Sbjct: 354 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQ--------TGEPGIAGFKGEQ--GPKGE 403
Query: 485 PAPSGHPKAGHSENGVEEDTEGRTGPKEGTP--GSPSETPGPSPAGPAGDEPAESPSETP 542
P P+G P+ G EE G G G G P E P G G + P P
Sbjct: 404 PGPAG-PQGAPGPAG-EEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAP 461
Query: 543 GPR-PAGPAGDEPAESPSETPG-------------PRPAGPAGDE-PAESPSETPGPSPA 587
G R P+G AG + A PG P AGP G P+ +P E P P
Sbjct: 462 GERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPP 521
Query: 588 GPTRDEPAESPSETPGPRPA----GPAGDEPAESP----------SETPGPRPAGPAGDE 633
GP PGP+ A G AG++ ET P GPAG
Sbjct: 522 GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPA 581
Query: 634 PAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSA 672
PGPS P GE + D V A
Sbjct: 582 GERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEA 620
Score = 66.2 bits (160), Expect = 9e-11
Identities = 77/279 (27%), Positives = 98/279 (35%), Gaps = 58/279 (20%)
Query: 436 PGEAVQPCRQPLGARVADKVRKRRKVDEGA-GDSAAVASGGAQTLALAGSPAPSGHP--K 492
PGE P + L R D + + GA G+ G Q G P G P K
Sbjct: 482 PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQ--GARGQPGVMGFPGPK 539
Query: 493 AGHSENGV--EEDTEGRTGPKEGTPGSPSETPGPSPAGPA------GDEPAESPSETPG- 543
+ E G E+ G G + G PG ET P GPA G++ A PS G
Sbjct: 540 GANGEPGKAGEKGLPGAPGLR-GLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGL 598
Query: 544 PRPAGPAGD--EPAES--PSETPGPRPAGPAGDEPAESPSETPGPS--------PAGPTR 591
P P GP G+ +P + P E P GP G+ +PG P P
Sbjct: 599 PGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGT 658
Query: 592 DEP--AESPSETPGPR-------------------PAGPAGDEPAESPSETPGP------ 624
D P A P+ PG + P G GD + P PG
Sbjct: 659 DGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGL 718
Query: 625 ----RPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGE 659
P GPAG + PGP+ + R P + GE
Sbjct: 719 TGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGE 757
Score = 65.1 bits (157), Expect = 2e-10
Identities = 106/381 (27%), Positives = 133/381 (34%), Gaps = 62/381 (16%)
Query: 309 KVEEEGSPGDPDHEA--STQGRT--CGPEHSKG--GGRVDEG-PQPRSVEPQDAGPLERS 361
K E+G PG P G T GP G G R ++G P P + P
Sbjct: 547 KAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPG 606
Query: 362 QGDEAGGHGEDRPEPLSPKESKKRKLELSRREQP-PTEPGPQSASEVEKIALNLEGCALS 420
+G + G G P E+ L R E+ P E G A ++ L G +
Sbjct: 607 EGGKPGDQGV-------PGEAGAPGLVGPRGERGFPGERGSPGAQGLQG-PRGLPGTPGT 658
Query: 421 QGSLRTGTQEVGGQDPGEAVQPCRQPL-----GARVADKVRKRRKVDEGAGDSAAVASGG 475
G G G PG P Q + A +A R V E + A GG
Sbjct: 659 DGP--KGASGPAGP-PGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGG 715
Query: 476 AQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPK-----EGTPGSPSETPGPSPAGPA 530
G P P+G NG E+ G GP G PG ET P PAG A
Sbjct: 716 RGLTGPIGPPGPAG-------ANG-EKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFA 767
Query: 531 GDEPAESPSETPGPR-PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGP 589
G A+ G + AG GD A P P GP+G + P+ GP A
Sbjct: 768 GPPGADGQPGAKGEQGEAGQKGDAGA--------PGPQGPSGAPGPQGPTGVTGPKGARG 819
Query: 590 TRDEPAESPSETPGPRPAGPAGDEPAESPSETPG-PRPAGPAGDEPAESPSETPG----- 643
+ P T P AG G + PG P P+G G + A S PG
Sbjct: 820 AQGPPGA----TGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEP 875
Query: 644 --PSPAGPTRDEPAKAGEAAE 662
PAGP P + GE +
Sbjct: 876 GLQGPAGP----PGEKGEPGD 892
Score = 64.3 bits (155), Expect = 3e-10
Identities = 77/265 (29%), Positives = 94/265 (35%), Gaps = 43/265 (16%)
Query: 435 DPGEAVQP-CRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQ-TLALAGSPAPSGHPK 492
+PGE +P P+G R + D AG G G P G P
Sbjct: 157 NPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPG 216
Query: 493 A-GHSENGVEEDTEGRTGPK--EGTPGSPSETPGPSP------------AGPAGDEPAES 537
GH + +G G +G GSP E P P GPAG A
Sbjct: 217 VKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARG 276
Query: 538 PSETPGPR-PAGPAGDEPAESPSETPGPR----PAGPAGDEPAESPSETPG----PSPAG 588
PGP P GP G PG + P G G E A+ P PG P PAG
Sbjct: 277 NDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAG 336
Query: 589 PTRD------EPAESPSETPG-------PRPAGPAGDEPAESPSETPGPR-PAGPAGDEP 634
+ + A+ + PG P P GP G + A P G G AG +
Sbjct: 337 ASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKG 396
Query: 635 AESPSETPGPSPAGPTRDEPAKAGE 659
+ P PG PAGP + P AGE
Sbjct: 397 EQGPKGEPG--PAGP-QGAPGPAGE 418
Score = 63.2 bits (152), Expect = 8e-10
Identities = 91/323 (28%), Positives = 107/323 (33%), Gaps = 45/323 (13%)
Query: 370 GEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSL----R 425
G+D +P PK K ++ P PGPQ + E+ G +G+ R
Sbjct: 25 GQDVRQP-GPKGQKGEPGDIKDIVGPKGPPGPQGPAG-EQGPRGDRGDKGEKGAPGPRGR 82
Query: 426 TGTQEVGGQD--PGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSA-AVASGGAQTLALA 482
G G PG P LG A ++ DE AG + V G +
Sbjct: 83 DGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGG--FDEKAGGAQLGVMQGPMGPMGPR 140
Query: 483 GSPAPSGHP-KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSET 541
G P P+G P G N E G +GP P PGP P P D A P +
Sbjct: 141 GPPGPAGAPGPQGFQGNPGEPGEPGVSGPM-----GPRGPPGP-PGKPGDDGEAGKPGKA 194
Query: 542 PGPRPAGPAGDEPAESPSETPG-------PRPAGPAGDEPAE-------SPSETPGPSPA 587
P GP G PG P G G+ A SP E P P
Sbjct: 195 GERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPM 254
Query: 588 GPTRDEPAESPSETPG-----------PRPAGPAGD-EPAESPSETPGPRPAGPAGDEPA 635
GP R P E P P PAGP G PA P P G AG A
Sbjct: 255 GP-RGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGA 313
Query: 636 ESPSETPGPSPAGPTRDEPAKAG 658
P GP T P AG
Sbjct: 314 RGPEGAQGPRGEPGTPGSPGPAG 336
Score = 59.7 bits (143), Expect = 9e-09
Identities = 114/413 (27%), Positives = 141/413 (34%), Gaps = 115/413 (27%)
Query: 314 GSPGDPDHEASTQGRTCGPEHSKG--GGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGE 371
G+PG P GP G G R D GP R+ EP GP E G G+
Sbjct: 843 GNPGPPGPP--------GPSGKDGPKGARGDSGPPGRAGEPGLQGPA--GPPGEKGEPGD 892
Query: 372 DRPE----PLSPKESKKRK----LELSRREQP-PTEPGPQSASEVEKIALNLEGCALSQG 422
D P P P+ ++ L R E+ P PGP S ++ A G G
Sbjct: 893 DGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP-SGEPGKQGAPGASGDRGPPG 951
Query: 423 SLRTGTQEVGGQDPGEAVQPCRQ-PLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLAL 481
+ +PG P P G A V+ R G++ AV + GA
Sbjct: 952 PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDR------GETGAVGAPGAP--GP 1003
Query: 482 AGSPAPSGHPKAGHSENGVEEDTEGRTGPK-----------------EGTPGSPSET--- 521
GSP P+G P + G E +G GP +G G P E
Sbjct: 1004 PGSPGPAG-PTGKQGDRG-EAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLK 1061
Query: 522 --------------PGPS----PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 563
PGPS +GPAG P P P GP+G + A PG
Sbjct: 1062 GHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGP-----PGPVGPSGKDGANG---IPG 1113
Query: 564 P-RPAGPAGDEPAESPSETPG-PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSET 621
P P GP G P+ PG P P GP P P GP D A
Sbjct: 1114 PIGPPGPRGRSGETGPAGPPGNPGPPGP--------------PGPPGPGIDMSAF----- 1154
Query: 622 PGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKS 674
AG P E GP P R + A G DAEV+++ KS
Sbjct: 1155 --------AGLGPREK-----GPDPLQYMRADQAAGG--LRQHDAEVDATLKS 1192
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,401,440
Number of Sequences: 37866
Number of extensions: 3052959
Number of successful extensions: 72272
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 2518
Number of HSP's that attempted gapping in prelim test: 18644
Number of HSP's gapped (non-prelim): 21759
length of query: 677
length of database: 18,247,518
effective HSP length: 109
effective length of query: 568
effective length of database: 14,120,124
effective search space: 8020230432
effective search space used: 8020230432
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.