Guide to the Human Genome
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Name: ZFY Sequence: fasta or formatted (801aa) NCBI GI: 33239440
Description:

zinc finger protein, Y-linked isoform 1

Referenced in:

Gene Families
Y-linked Genes
Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [724aa] zinc finger protein, Y-linked isoform 2
alt prot [610aa] zinc finger protein, Y-linked isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         45           6
 C cysteine            4.1         33           1
 D aspartate           8.5         68           2
 E glutamate           8.9         71           2
 F phenylalanine       2.9         23           2
 G glycine             4.5         36           2
 H histidine           7.0         56           2
 I isoleucine          5.7         46           3
 K lysine              8.4         67           3
 L leucine             5.2         42           2
 M methionine          2.7         22           1
 N asparagine          2.9         23           2
 P proline             4.1         33           1
 Q glutamine           3.6         29           2
 R arginine            3.5         28           2
 S serine              7.2         58           2
 T threonine           4.6         37           2
 V valine              8.0         64           2
 W tryptophan          0.1          1           1
 Y tyrosine            2.4         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein, Y-linked isoform 1 
ZFX                   0.938   zinc finger protein, X-linked 
ZFY                   0.892   zinc finger protein, Y-linked isoform 2 
ZFY                   0.747   zinc finger protein, Y-linked isoform 3 
ZNF711                0.507   zinc finger protein 711 
LOC100292052          0.141   PREDICTED: similar to hCG1773661 
LOC100287226          0.141   PREDICTED: similar to hCG1773661 
LOC100287226          0.141   PREDICTED: hypothetical protein XP_002343677 
ZNF91                 0.139   zinc finger protein 91 
ZNF43                 0.138   zinc finger protein 43 
ZNF708                0.137   zinc finger protein 708 
ZNF90                 0.137   zinc finger protein 90 
LOC388559             0.135   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.135   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.135   PREDICTED: hypothetical protein LOC388559 
ZNF28                 0.134   zinc finger protein 28 
ZNF85                 0.134   zinc finger protein 85 
ZNF99                 0.134   zinc finger protein 99 
ZNF675                0.134   zinc finger protein 675 
ZNF493                0.132   zinc finger protein 493 isoform 1 
ZNF493                0.132   zinc finger protein 493 isoform 3 
ZNF737                0.132   PREDICTED: zinc finger protein 737 
ZNF737                0.132   PREDICTED: zinc finger protein 737 
ZNF737                0.132   PREDICTED: zinc finger protein 737 
ZNF429                0.132   zinc finger protein 429 
ZNF66                 0.132   PREDICTED: zinc finger protein 66 
ZNF66                 0.132   PREDICTED: zinc finger protein 66 
ZNF227                0.132   zinc finger protein 227 
ZNF66                 0.131   PREDICTED: zinc finger protein 66 
ZNF93                 0.131   zinc finger protein 93 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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