Guide to the Human Genome
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Name: TECPR1 Sequence: fasta or formatted (1165aa) NCBI GI: 32698704
Description:

tectonin beta-propeller repeat containing 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         80           3
 C cysteine            2.7         32           2
 D aspartate           5.2         61           2
 E glutamate           6.2         72           2
 F phenylalanine       2.3         27           2
 G glycine             8.9        104           3
 H histidine           2.8         33           1
 I isoleucine          3.4         40           2
 K lysine              3.7         43           2
 L leucine             6.3         73           3
 M methionine          1.4         16           1
 N asparagine          2.9         34           2
 P proline             6.7         78           2
 Q glutamine           4.0         47           2
 R arginine            5.8         67           3
 S serine              9.8        114           4
 T threonine           4.7         55           2
 V valine              8.2         95           2
 W tryptophan          5.1         59           2
 Y tyrosine            3.0         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tectonin beta-propeller repeat containing 1 
TECPR2                0.018   tectonin beta-propeller repeat containing 2 
DYSF                  0.009   dysferlin isoform 2 
DYSF                  0.009   dysferlin isoform 8 
DYSF                  0.009   dysferlin isoform 1 
DYSF                  0.009   dysferlin isoform 3 
DYSF                  0.009   dysferlin isoform 4 
DYSF                  0.009   dysferlin isoform 5 
DYSF                  0.009   dysferlin isoform 6 
DYSF                  0.009   dysferlin isoform 7 
DYSF                  0.009   dysferlin isoform 14 
DYSF                  0.009   dysferlin isoform 13 
DYSF                  0.009   dysferlin isoform 12 
DYSF                  0.009   dysferlin isoform 11 
DYSF                  0.009   dysferlin isoform 10 
DYSF                  0.009   dysferlin isoform 9 
AP3B2                 0.006   adaptor-related protein complex 3, beta 2 subunit [H...
FER1L5                0.006   fer-1-like 5 isoform 2 
MYOF                  0.005   myoferlin isoform b 
MYOF                  0.005   myoferlin isoform a 
LOC100291071          0.005   PREDICTED: hypothetical protein XP_002346951 
LOC100287198          0.005   PREDICTED: hypothetical protein XP_002342815 
LOC100287198          0.005   PREDICTED: hypothetical protein 
OSBP2                 0.005   oxysterol binding protein 2 isoform a 
OGFR                  0.004   opioid growth factor receptor 
LOC728163             0.004   PREDICTED: hypothetical protein 
ANKRD18B              0.004   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.004   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.004   PREDICTED: ankyrin repeat domain 18B 
SIPA1L3               0.004   signal-induced proliferation-associated 1 like 3 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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