Guide to the Human Genome
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Name: NECAB2 Sequence: fasta or formatted (386aa) NCBI GI: 32129214
Description:

neuronal calcium-binding protein 2

Referenced in:

Calmodulin and Calcium
Neurons
Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         36           2
 C cysteine            2.1          8           1
 D aspartate           6.0         23           2
 E glutamate           8.8         34           2
 F phenylalanine       3.9         15           2
 G glycine             6.2         24           2
 H histidine           3.1         12           1
 I isoleucine          2.8         11           1
 K lysine              4.1         16           2
 L leucine            11.7         45           2
 M methionine          2.1          8           1
 N asparagine          2.8         11           1
 P proline             4.4         17           2
 Q glutamine           5.2         20           2
 R arginine            6.7         26           2
 S serine              6.7         26           2
 T threonine           5.4         21           2
 V valine              5.4         21           1
 W tryptophan          1.6          6           1
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuronal calcium-binding protein 2 
NECAB1                0.344   N-terminal EF-hand calcium binding protein 1 
NECAB3                0.307   N-terminal EF-hand calcium binding protein 3 isofor...
NECAB3                0.293   N-terminal EF-hand calcium binding protein 3 isofor...
SLC25A23              0.023   solute carrier family 25, member 23 
SPTAN1                0.019   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.019   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SLC25A24              0.017   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.017   solute carrier family 25 member 24 isoform 2 
SDF4                  0.016   stromal cell derived factor 4 isoform 1 precursor [Ho...
SDF4                  0.016   stromal cell derived factor 4 isoform 2 precursor [H...
DST                   0.016   dystonin isoform 4 
DST                   0.016   dystonin isoform 3 
DST                   0.016   dystonin isoform 2 
DST                   0.016   dystonin isoform 1 
DST                   0.016   dystonin isoform 1eA precursor 
TNNC1                 0.016   troponin C, slow 
LOC100292202          0.015   PREDICTED: similar to solute carrier family 25, mem...
MACF1                 0.015   microfilament and actin filament cross-linker protei...
MACF1                 0.015   microfilament and actin filament cross-linker protei...
SLC25A25              0.015   solute carrier family 25, member 25 isoform c 
SLC25A25              0.015   solute carrier family 25, member 25 isoform a 
PLCD4                 0.013   phospholipase C, delta 4 
TPR                   0.012   nuclear pore complex-associated protein TPR 
SCEL                  0.012   sciellin isoform 3 
PCNT                  0.012   pericentrin 
LOC100292202          0.011   PREDICTED: similar to solute carrier family 25, mem...
CABP4                 0.011   calcium binding protein 4 
AKAP9                 0.011   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.011   A-kinase anchor protein 9 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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