Guide to the Human Genome
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Name: ACSM4 Sequence: fasta or formatted (580aa) NCBI GI: 122937307
Description:

acyl-CoA synthetase medium-chain family member 4

Referenced in:

Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         34           2
 C cysteine            2.2         13           1
 D aspartate           4.7         27           2
 E glutamate           6.0         35           2
 F phenylalanine       5.2         30           2
 G glycine             7.2         42           2
 H histidine           1.4          8           1
 I isoleucine          5.3         31           2
 K lysine              6.7         39           2
 L leucine             8.8         51           2
 M methionine          1.9         11           1
 N asparagine          2.9         17           1
 P proline             6.2         36           2
 Q glutamine           4.3         25           1
 R arginine            5.7         33           2
 S serine              6.2         36           2
 T threonine           6.2         36           2
 V valine              7.2         42           2
 W tryptophan          2.9         17           2
 Y tyrosine            2.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA synthetase medium-chain family member 4 [H... 
ACSM3                 0.619   SA hypertension-associated homolog isoform 1 
ACSM5                 0.613   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM2B                0.562   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.562   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2A                0.560   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM1                 0.525   acyl-CoA synthetase medium-chain family member 1 [H...
LOC100291873          0.520   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.520   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSM3                 0.390   SA hypertension-associated homolog isoform 2 
C10orf129             0.362   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
ACSS2                 0.138   acyl-CoA synthetase short-chain family member 2 iso...
ACSS1                 0.138   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS2                 0.134   acyl-CoA synthetase short-chain family member 2 isofo...
ACSS3                 0.116   acyl-CoA synthetase short-chain family member 3 [Hom...
ACSF3                 0.092   acyl-CoA synthetase family member 3 
ACSF3                 0.092   acyl-CoA synthetase family member 3 
ACSF2                 0.084   acyl-CoA synthetase family member 2 
SLC27A1               0.054   solute carrier family 27, member 1 
SLC27A4               0.044   solute carrier family 27 (fatty acid transporter), m...
SLC27A2               0.043   solute carrier family 27 (fatty acid transporter), ...
SLC27A3               0.036   solute carrier family 27 member 3 
AACS                  0.034   acetoacetyl-CoA synthetase 
SLC27A6               0.033   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.033   solute carrier family 27 (fatty acid transporter), m...
ACSL6                 0.028   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL6                 0.028   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL1                 0.028   acyl-CoA synthetase long-chain family member 1 [Homo...
SLC27A5               0.027   solute carrier family 27 (fatty acid transporter), m...
ACSL5                 0.026   acyl-CoA synthetase long-chain family member 5 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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