Guide to the Human Genome
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Name: CEACAM18 Sequence: fasta or formatted (398aa) NCBI GI: 122937205
Description:

carcinoembryonic antigen-related cell adhesion molecule 18

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         27           2
 C cysteine            3.0         12           1
 D aspartate           4.8         19           2
 E glutamate           6.0         24           2
 F phenylalanine       2.0          8           1
 G glycine             7.0         28           2
 H histidine           1.3          5           1
 I isoleucine          5.3         21           2
 K lysine              2.0          8           1
 L leucine             9.3         37           3
 M methionine          3.5         14           1
 N asparagine          4.5         18           1
 P proline             6.0         24           2
 Q glutamine           4.5         18           2
 R arginine            6.3         25           2
 S serine              9.3         37           3
 T threonine           5.5         22           1
 V valine              7.3         29           2
 W tryptophan          2.3          9           1
 Y tyrosine            3.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion mole... 
CEACAM6               0.119   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.117   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.113   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.113   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.110   carcinoembryonic antigen-related cell adhesion molec...
CEACAM16              0.100   carcinoembryonic antigen-related cell adhesion molec...
PSG5                  0.085   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.085   pregnancy specific beta-1-glycoprotein 5 
PSG4                  0.081   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG11                 0.076   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM7               0.076   carcinoembryonic antigen-related cell adhesion molecu...
PSG2                  0.070   pregnancy specific beta-1-glycoprotein 2 
CEACAM20              0.070   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.070   carcinoembryonic antigen-related cell adhesion mole...
CEACAM21              0.062   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.062   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.062   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.062   carcinoembryonic antigen-related cell adhesion mole...
PSG6                  0.056   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.056   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG8                  0.052   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.052   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG3                  0.051   pregnancy specific beta-1-glycoprotein 3 
PSG4                  0.051   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG1                  0.049   pregnancy specific beta-1-glycoprotein 1 
PSG7                  0.041   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG9                  0.038   pregnancy specific beta-1-glycoprotein 9 
CEACAM3               0.038   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.037   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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