Guide to the Human Genome
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Name: ZNF655 Sequence: fasta or formatted (491aa) NCBI GI: 28416427
Description:

zinc finger protein 655 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [181aa] zinc finger protein 655 isoform b
alt prot [526aa] zinc finger protein 655 isoform f
alt prot [110aa] zinc finger protein 655 isoform c
alt prot [181aa] zinc finger protein 655 isoform b
alt prot [526aa] zinc finger protein 655 isoform f
alt prot [110aa] zinc finger protein 655 isoform c
alt mRNA [491aa] zinc finger protein 655 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         15           2
 C cysteine            4.7         23           1
 D aspartate           4.7         23           2
 E glutamate          11.2         55           2
 F phenylalanine       3.5         17           1
 G glycine             3.1         15           1
 H histidine           6.5         32           2
 I isoleucine          4.9         24           2
 K lysine              9.2         45           2
 L leucine             6.3         31           2
 M methionine          1.2          6           1
 N asparagine          3.1         15           2
 P proline             2.6         13           1
 Q glutamine           6.9         34           2
 R arginine            5.7         28           1
 S serine             11.4         56           3
 T threonine           5.1         25           1
 V valine              3.3         16           1
 W tryptophan          0.4          2           1
 Y tyrosine            3.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 655 isoform a 
ZNF655                1.000   zinc finger protein 655 isoform a 
ZNF655                0.983   zinc finger protein 655 isoform f 
ZNF655                0.983   zinc finger protein 655 isoform f 
LOC100131257          0.672   PREDICTED: similar to hCG19534 
LOC100131257          0.672   PREDICTED: similar to hCG19534 
LOC100131257          0.672   PREDICTED: similar to hCG19534 
LOC100131257          0.669   PREDICTED: similar to hCG19534 
ZNF135                0.287   zinc finger protein 135 
ZNF189                0.287   zinc finger protein 189 isoform 2 
ZNF189                0.287   zinc finger protein 189 isoform 1 
ZNF167                0.286   zinc finger protein 167 isoform 1 
ZNF471                0.282   zinc finger protein 471 
ZFP3                  0.281   zinc finger protein-3 
ZNF420                0.281   zinc finger protein 420 
ZNF251                0.279   zinc finger protein 251 
ZNF347                0.279   zinc finger protein 347 
ZNF429                0.278   zinc finger protein 429 
ZNF16                 0.278   zinc finger protein 16 
ZNF16                 0.278   zinc finger protein 16 
ZFP2                  0.278   zinc finger protein 2 homolog 
ZNF257                0.275   zinc finger protein 257 
ZNF184                0.274   zinc finger protein 184 
LOC647678             0.273   PREDICTED: similar to zinc finger protein 347 [Homo...
ZNF658                0.273   zinc finger protein 658 
LOC647678             0.272   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.272   PREDICTED: hypothetical protein XP_002343697 
ZNF93                 0.271   zinc finger protein 93 
ZNF852                0.269   PREDICTED: zinc finger protein 852 
ZNF852                0.269   PREDICTED: zinc finger protein 852 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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