Guide to the Human Genome
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Name: NFATC3 Sequence: fasta or formatted (1075aa) NCBI GI: 27886561
Description:

nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 isoform 1

Referenced in:

T cells

Other entries for this name:
alt prot [1065aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
alt prot [1045aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
alt prot [1068aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         58           3
 C cysteine            2.6         28           1
 D aspartate           4.6         49           2
 E glutamate           5.3         57           2
 F phenylalanine       2.5         27           1
 G glycine             7.2         77           2
 H histidine           4.6         49           2
 I isoleucine          4.7         51           3
 K lysine              3.2         34           2
 L leucine             8.2         88           2
 M methionine          1.1         12           1
 N asparagine          2.5         27           2
 P proline            11.1        119           4
 Q glutamine           5.7         61           2
 R arginine            4.0         43           2
 S serine             14.3        154           2
 T threonine           5.4         58           2
 V valine              4.8         52           2
 W tryptophan          0.7          7           1
 Y tyrosine            2.2         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of activated T-cells, cytoplasmic, ca... 
NFATC3                0.965   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.965   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.965   nuclear factor of activated T-cells, cytoplasmic, cal...
NFATC4                0.258   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.258   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC1                0.245   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.244   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.244   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.243   nuclear factor of activated T-cells, cytosolic compo...
NFATC2                0.195   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC2                0.195   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC2                0.195   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC1                0.137   nuclear factor of activated T-cells, cytosolic compo...
NFAT5                 0.092   nuclear factor of activated T-cells 5 isoform c [Homo...
NFAT5                 0.091   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.091   nuclear factor of activated T-cells 5 isoform b [Ho...
NFAT5                 0.091   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.090   nuclear factor of activated T-cells 5 isoform d [Ho...
RELA                  0.017   v-rel reticuloendotheliosis viral oncogene homolog ...
RELA                  0.016   v-rel reticuloendotheliosis viral oncogene homolog ...
MUC4                  0.016   mucin 4 isoform a 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
MUC17                 0.013   mucin 17 
SEC24B                0.012   SEC24 (S. cerevisiae) homolog B isoform b 
MAGEC1                0.010   melanoma antigen family C, 1 
POLR2A                0.009   DNA-directed RNA polymerase II A 
CREBBP                0.009   CREB binding protein isoform b 
CREBBP                0.009   CREB binding protein isoform a 
OGFR                  0.009   opioid growth factor receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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