Name: SSX2 | Sequence: fasta or formatted (223aa) | NCBI GI: 27659724 | |
Description: synovial sarcoma, X breakpoint 2 isoform a
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Referenced in: Additional Genes in Development
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Other entries for this name:
alt prot [188aa] synovial sarcoma, X breakpoint 2 isoform b | |||
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.3 14 1 C cysteine 1.3 3 1 D aspartate 5.4 12 2 E glutamate 9.4 21 2 F phenylalanine 4.0 9 1 G glycine 8.5 19 2 H histidine 2.2 5 1 I isoleucine 4.0 9 1 K lysine 9.4 21 2 L leucine 2.7 6 1 M methionine 4.0 9 1 N asparagine 6.3 14 1 P proline 8.1 18 2 Q glutamine 4.0 9 1 R arginine 6.7 15 2 S serine 5.8 13 2 T threonine 5.8 13 2 V valine 2.7 6 1 W tryptophan 1.3 3 1 Y tyrosine 1.8 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 synovial sarcoma, X breakpoint 2 isoform a SSX2B 0.679 PREDICTED: synovial sarcoma, X breakpoint 2B SSX2 0.679 synovial sarcoma, X breakpoint 2 isoform b SSX3 0.591 synovial sarcoma, X breakpoint 3 isoform a SSX3 0.589 synovial sarcoma, X breakpoint 3 isoform b SSX9 0.564 synovial sarcoma, X breakpoint 9 SSX5 0.551 synovial sarcoma, X breakpoint 5 isoform b SSX7 0.544 synovial sarcoma, X breakpoint 7 SSX5 0.503 synovial sarcoma, X breakpoint 5 isoform a SSX4 0.497 synovial sarcoma, X breakpoint 4 isoform a SSX4B 0.497 synovial sarcoma, X breakpoint 4B isoform a SSX6 0.494 synovial sarcoma, X breakpoint 6 SSX1 0.474 synovial sarcoma, X breakpoint 1 SSX4 0.333 synovial sarcoma, X breakpoint 4 isoform b SSX4B 0.333 synovial sarcoma, X breakpoint 4B isoform b LOC100291196 0.166 PREDICTED: hypothetical protein XP_002348195 PRDM9 0.110 PR domain containing 9 PRDM7 0.103 PR domain containing 7 isoform 1 LOC100293029 0.052 PREDICTED: similar to zinc finger protein 30 LOC100290062 0.052 PREDICTED: hypothetical protein XP_002346980 LOC100289678 0.052 PREDICTED: hypothetical protein XP_002342831 LOC100289678 0.052 PREDICTED: similar to zinc finger protein 30 ZNF688 0.047 zinc finger protein 688 isoform a ZNF777 0.040 zinc finger protein 777 ZNF425 0.040 zinc finger protein 425 ZNF398 0.040 zinc finger 398 isoform a ZNF789 0.031 zinc finger protein 789 isoform 1 ZNF132 0.031 zinc finger protein 132 POGK 0.031 pogo transposable element with KRAB domain ZNF786 0.031 zinc finger protein 786Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.