HOXA13 23929

Name: HOXA13	Sequence: fasta or formatted (388aa)		NCBI GI: 24497554
Description: homeobox A13		Referenced in: Protein Composition and Structure HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 24.0 93 18 C cysteine 1.5 6 1 D aspartate 2.1 8 1 E glutamate 4.4 17 2 F phenylalanine 2.6 10 1 G glycine 9.0 35 4 H histidine 2.8 11 3 I isoleucine 1.5 6 1 K lysine 4.9 19 2 L leucine 4.9 19 2 M methionine 2.6 10 1 N asparagine 3.4 13 1 P proline 9.5 37 2 Q glutamine 3.4 13 1 R arginine 4.1 16 3 S serine 7.5 29 3 T threonine 3.1 12 2 V valine 3.4 13 2 W tryptophan 1.3 5 1 Y tyrosine 4.1 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox A13 HOXC13 0.333 homeobox C13 HOXD13 0.323 homeobox D13 HOXB13 0.295 homeobox B13 HOXD11 0.093 homeobox D11 HOXD9 0.084 homeobox D9 HOXD12 0.080 homeobox D12 HOXC11 0.077 homeobox C11 HOXB9 0.077 homeobox B9 HOXA11 0.075 homeobox A11 HOXC10 0.072 homeobox C10 HOXC12 0.071 homeobox C12 HOXC9 0.071 homeobox C9 GSX2 0.068 GS homeobox 2 HOXB1 0.068 homeobox B1 HOXA10 0.067 homeobox A10 isoform a HOXD10 0.065 homeobox D10 HOXA9 0.065 homeobox A9 EN1 0.064 engrailed homeobox 1 PDX1 0.064 pancreatic and duodenal homeobox 1 HOXA10 0.064 homeobox A10 isoform b HOXC4 0.063 homeobox C4 HOXC4 0.063 homeobox C4 GSX1 0.061 GS homeobox 1 ARID1B 0.061 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.061 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.061 AT rich interactive domain 1B (SWI1-like) isoform 3 ... CDX1 0.060 caudal type homeobox 1 CDX2 0.059 caudal type homeobox 2 CDX4 0.059 caudal type homeobox 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.