Guide to the Human Genome
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Search of human proteins with 24497506

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24497506 forkhead box A3 [Homo sapiens]
         (350 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24497506 forkhead box A3 [Homo sapiens]                            734   0.0  
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                  280   1e-75
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                 280   1e-75
gi|24497501 forkhead box A1 [Homo sapiens]                            276   2e-74
gi|4758392 forkhead box D1 [Homo sapiens]                             186   4e-47
gi|105554437 forkhead box B1 [Homo sapiens]                           176   2e-44
gi|11386197 forkhead box E3 [Homo sapiens]                            169   3e-42
gi|61966923 forkhead box B2 [Homo sapiens]                            169   4e-42
gi|119395716 forkhead box C1 [Homo sapiens]                           167   1e-41
gi|4885237 forkhead box C2 [Homo sapiens]                             160   2e-39
gi|134142824 forkhead box D2 [Homo sapiens]                           159   5e-39
gi|21618325 forkhead box E1 [Homo sapiens]                            155   5e-38
gi|6912372 forkhead box D3 [Homo sapiens]                             154   9e-38
gi|208431824 forkhead box I3 [Homo sapiens]                           149   4e-36
gi|22779860 forkhead box L1 [Homo sapiens]                            147   2e-35
gi|28973785 forkhead box S1 [Homo sapiens]                            145   5e-35
gi|4557595 forkhead box F2 [Homo sapiens]                             143   2e-34
gi|195947376 forkhead box I2 [Homo sapiens]                           143   3e-34
gi|18959276 forkhead box D4-like 1 [Homo sapiens]                     141   8e-34
gi|75677594 forkhead box D4 [Homo sapiens]                            141   8e-34
gi|157042770 forkhead box D4-like 3 [Homo sapiens]                    141   1e-33
gi|149944560 forkhead box D4-like 2 [Homo sapiens]                    141   1e-33
gi|187423902 forkhead box D4-like 5 [Homo sapiens]                    141   1e-33
gi|146262007 forkhead box D4-like 6 [Homo sapiens]                    141   1e-33
gi|76880472 forkhead box D4-like 4 [Homo sapiens]                     141   1e-33
gi|32307177 forkhead box G1 [Homo sapiens]                            140   2e-33
gi|110735445 forkhead box F1 [Homo sapiens]                           132   4e-31
gi|21618327 forkhead box I1 isoform a [Homo sapiens]                  132   4e-31
gi|145309320 forkhead box Q1 [Homo sapiens]                           126   3e-29
gi|50301236 forkhead box J1 [Homo sapiens]                            125   6e-29

>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score =  734 bits (1896), Expect = 0.0
 Identities = 350/350 (100%), Positives = 350/350 (100%)

Query: 1   MLGSVKMEAHDLAEWSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPPGGLPASPL 60
           MLGSVKMEAHDLAEWSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPPGGLPASPL
Sbjct: 1   MLGSVKMEAHDLAEWSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPPGGLPASPL 60

Query: 61  PSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPY 120
           PSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPY
Sbjct: 61  PSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPY 120

Query: 121 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 180
           SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR
Sbjct: 121 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 180

Query: 181 SPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAAST 240
           SPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAAST
Sbjct: 181 SPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAAST 240

Query: 241 TTPAATVTSPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPYNF 300
           TTPAATVTSPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPYNF
Sbjct: 241 TTPAATVTSPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPYNF 300

Query: 301 NHPFSINNLMSEQTPAPPKLDVGFGGYGAEGGEPGVYYQGLYSRSLLNAS 350
           NHPFSINNLMSEQTPAPPKLDVGFGGYGAEGGEPGVYYQGLYSRSLLNAS
Sbjct: 301 NHPFSINNLMSEQTPAPPKLDVGFGGYGAEGGEPGVYYQGLYSRSLLNAS 350


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score =  280 bits (717), Expect = 1e-75
 Identities = 190/461 (41%), Positives = 235/461 (50%), Gaps = 115/461 (24%)

Query: 1   MLGSVKMEAHDLAEWSYYPEAGEVYSPVTPVPT---MAPLNSYMTLNPLSSPYPPGGLPA 57
           MLG+VKME H+ ++WS Y    E YS V+ +     M  +N+YM+++  +     G + A
Sbjct: 1   MLGAVKMEGHEPSDWSSYYAEPEGYSSVSNMNAGLGMNGMNTYMSMSAAAMGSGSGNMSA 60

Query: 58  SPL-----------PS--------------GPLAPPAPAAPLGPTF-PGLGVSGGSSSSG 91
             +           PS              G  A  A  A +GP   P L   GG ++  
Sbjct: 61  GSMNMSSYVGAGMSPSLAGMSPGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGA 120

Query: 92  YGAPGP--------------GLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKM 137
            G   P              GL   ++ PK YRR   HAKPPYSYISLITMAIQQ+P KM
Sbjct: 121 MGGLAPYANMNSMSPMYGQAGLSRARD-PKTYRRSYTHAKPPYSYISLITMAIQQSPNKM 179

Query: 138 LTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSS 197
           LTLSEIYQWIMDLFP+YR+NQQRWQNSIRHSLSFNDCF+KV RSPDKPGKGS+W LHP S
Sbjct: 180 LTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDS 239

Query: 198 GNMFENGCYLRRQKRFKLEEKV------------KKGGSGA-ATTTRNGTGSAASTTTPA 244
           GNMFENGCYLRRQKRFK E+++            KK  +GA A+  + G  +  ++ TPA
Sbjct: 240 GNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASETPA 299

Query: 245 ATVTSPPQPPPPAPEPEAQG-----GEDVGALDCGSPASST-------------PYFTGL 286
            T  SP     P  E +  G     G    AL    PA S              P+  GL
Sbjct: 300 GT-ESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGL 358

Query: 287 ELPGELKLDAPYNFNHPFSINNLMSEQTP--------APPKLDVG-------FGGYGAEG 331
                LK +  Y FNHPFSINNLMS +           P K+D+        + GYG+  
Sbjct: 359 PPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGYGSP- 417

Query: 332 GEPGV----------------------YYQGLYSRSLLNAS 350
             PG                       YYQG+YSR ++N+S
Sbjct: 418 -MPGSLAMGPVTNKTGLDASPLAADTSYYQGVYSRPIMNSS 457


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score =  280 bits (717), Expect = 1e-75
 Identities = 190/461 (41%), Positives = 235/461 (50%), Gaps = 115/461 (24%)

Query: 1   MLGSVKMEAHDLAEWSYYPEAGEVYSPVTPVPT---MAPLNSYMTLNPLSSPYPPGGLPA 57
           MLG+VKME H+ ++WS Y    E YS V+ +     M  +N+YM+++  +     G + A
Sbjct: 7   MLGAVKMEGHEPSDWSSYYAEPEGYSSVSNMNAGLGMNGMNTYMSMSAAAMGSGSGNMSA 66

Query: 58  SPL-----------PS--------------GPLAPPAPAAPLGPTF-PGLGVSGGSSSSG 91
             +           PS              G  A  A  A +GP   P L   GG ++  
Sbjct: 67  GSMNMSSYVGAGMSPSLAGMSPGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGA 126

Query: 92  YGAPGP--------------GLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKM 137
            G   P              GL   ++ PK YRR   HAKPPYSYISLITMAIQQ+P KM
Sbjct: 127 MGGLAPYANMNSMSPMYGQAGLSRARD-PKTYRRSYTHAKPPYSYISLITMAIQQSPNKM 185

Query: 138 LTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSS 197
           LTLSEIYQWIMDLFP+YR+NQQRWQNSIRHSLSFNDCF+KV RSPDKPGKGS+W LHP S
Sbjct: 186 LTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDS 245

Query: 198 GNMFENGCYLRRQKRFKLEEKV------------KKGGSGA-ATTTRNGTGSAASTTTPA 244
           GNMFENGCYLRRQKRFK E+++            KK  +GA A+  + G  +  ++ TPA
Sbjct: 246 GNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASETPA 305

Query: 245 ATVTSPPQPPPPAPEPEAQG-----GEDVGALDCGSPASST-------------PYFTGL 286
            T  SP     P  E +  G     G    AL    PA S              P+  GL
Sbjct: 306 GT-ESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGL 364

Query: 287 ELPGELKLDAPYNFNHPFSINNLMSEQTP--------APPKLDVG-------FGGYGAEG 331
                LK +  Y FNHPFSINNLMS +           P K+D+        + GYG+  
Sbjct: 365 PPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGYGSP- 423

Query: 332 GEPGV----------------------YYQGLYSRSLLNAS 350
             PG                       YYQG+YSR ++N+S
Sbjct: 424 -MPGSLAMGPVTNKTGLDASPLAADTSYYQGVYSRPIMNSS 463


>gi|24497501 forkhead box A1 [Homo sapiens]
          Length = 472

 Score =  276 bits (706), Expect = 2e-74
 Identities = 192/475 (40%), Positives = 231/475 (48%), Gaps = 128/475 (26%)

Query: 1   MLGSVKMEAHDLAEW-SYYPEAGEVYSPV------TPVPTMAPLNSYMTLNPLSSP---- 49
           MLG+VKME H+ ++W SYY +  E YS V      + + +M  +N+YMT+N +++     
Sbjct: 1   MLGTVKMEGHETSDWNSYYADTQEAYSSVPVSNMNSGLGSMNSMNTYMTMNTMTTSGNMT 60

Query: 50  -------YPPGGLPASPLPSGPLAPPAPAA----------------PLGPTFPG-LGVSG 85
                  Y   GL A   P      P  +A                 L P+  G +G   
Sbjct: 61  PASFNMSYANPGLGAGLSPGAVAGMPGGSAGAMNSMTAAGVTAMGTALSPSGMGAMGAQQ 120

Query: 86  GSSSSGYG---------------AP---GPGLVHGKEMPKGYRRPLAHAKPPYSYISLIT 127
            +S +G G               AP   G     G    K ++R   HAKPPYSYISLIT
Sbjct: 121 AASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLIT 180

Query: 128 MAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGK 187
           MAIQQAP KMLTLSEIYQWIMDLFPYYR+NQQRWQNSIRHSLSFNDCFVKVARSPDKPGK
Sbjct: 181 MAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGK 240

Query: 188 GSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATV 247
           GSYW LHP SGNMFENGCYLRRQKRFK E++   GG G + +  +G      +    +  
Sbjct: 241 GSYWTLHPDSGNMFENGCYLRRQKRFKCEKQPGAGGGGGSGSGGSGAKGGPESRKDPSGA 300

Query: 248 TSPPQPPP---------------PAPEPEAQ--------GGEDVGALDCGSPASST--PY 282
           ++P    P               PAP P A              GA +  +PASST  P 
Sbjct: 301 SNPSADSPLHRGVHGKTGQLEGAPAPGPAASPQTLDHSGATATGGASELKTPASSTAPPI 360

Query: 283 FTGLELPG---------------------ELKLDAPYNFNHPFSINNLMSEQ-------- 313
            +G   PG                      LK D  Y+FNHPFSINNLMS          
Sbjct: 361 SSG---PGALASVPASHPAHGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQQHKLDF 417

Query: 314 -------------TPAPPKLDVGFGGYGAEGG-EPGV----YYQGLYSRSLLNAS 350
                        +  P  L +G          EP      YYQG+YSR +LN S
Sbjct: 418 KAYEQALQYSPYGSTLPASLPLGSASVTTRSPIEPSALEPAYYQGVYSRPVLNTS 472


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score =  186 bits (471), Expect = 4e-47
 Identities = 105/220 (47%), Positives = 123/220 (55%), Gaps = 15/220 (6%)

Query: 65  LAPPAPAAPLGP-TFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYI 123
           LAPPA  +P  P   P  G   G    G GA G G         G + PL   KPPYSYI
Sbjct: 79  LAPPAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGG-----SAGSGAKNPLV--KPPYSYI 131

Query: 124 SLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPD 183
           +LITMAI Q+P K LTLSEI ++I   FPYYRE    WQNSIRH+LS NDCFVK+ R P 
Sbjct: 132 ALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPG 191

Query: 184 KPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTP 243
            PGKG+YW L P S +MF+NG +LRR+KRFK +  +    + A +    G G+A     P
Sbjct: 192 NPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLLRGAGAAGGAGDP 251

Query: 244 AATVT-SPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPY 282
           AA     PP PPPP   P A G    G   CG      PY
Sbjct: 252 AAAAALFPPAPPPP---PHAYG---YGPYGCGYGLQLPPY 285


>gi|105554437 forkhead box B1 [Homo sapiens]
          Length = 325

 Score =  176 bits (447), Expect = 2e-44
 Identities = 98/214 (45%), Positives = 123/214 (57%), Gaps = 32/214 (14%)

Query: 105 MPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNS 164
           MP+  R   +  KPPYSYISL  MAIQ +P KML LSEIY++IMD FPYYREN QRWQNS
Sbjct: 1   MPRPGRNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNS 60

Query: 165 IRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGS 224
           +RH+LSFNDCF+K+ R PD+PGKGS+WALHPS G+MFENG +LRR+KRFK+ +      S
Sbjct: 61  LRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVLKSDHLAPS 120

Query: 225 GAATTTRNGTGSA-ASTTTPAATVTSPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYF 283
             A   +     A    +  AA+ T  PQ P               A + G  A      
Sbjct: 121 KPADAAQYLQQQAKLRLSALAASGTHLPQMP-------------AAAYNLGGVAQ----- 162

Query: 284 TGLELPGELKLDAPYNFNHPFSINNLMSEQTPAP 317
                        P  F HPF+I N+++ +   P
Sbjct: 163 -------------PSGFKHPFAIENIIAREYKMP 183


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score =  169 bits (428), Expect = 3e-42
 Identities = 93/216 (43%), Positives = 122/216 (56%), Gaps = 13/216 (6%)

Query: 46  LSSPYPPGGLPASPL--PSGPLAPPAPAAPLGP-TFPGLGVSGGSSSSGYGAPGPGLVHG 102
           +  P    G PA P   PSGP  PP+P A   P   P    +G   ++   APGPG    
Sbjct: 7   MDPPAAFSGFPALPAVAPSGP--PPSPLAGAEPGREPEEAAAGRGEAAPTPAPGPG---- 60

Query: 103 KEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQ 162
               +  RRPL   KPPYSYI+LI MA+  APG+ LTL+ IY++I + F +YR++ ++WQ
Sbjct: 61  ----RRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQ 116

Query: 163 NSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKG 222
           NSIRH+L+ NDCFVKV R P  PGKG+YW L P++ +MF+NG +LRR+KRFK  E     
Sbjct: 117 NSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAELPAHA 176

Query: 223 GSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAP 258
            +             A    PA  V  P   P P+P
Sbjct: 177 AAAPGPPLPFPYAPYAPAPGPALLVPPPSAGPGPSP 212



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 19  PEAGEVYSPVTPVPTMAPLNSYMT---LNPLSSPYPPGGLPASPLPSGPLAPPAPAAPLG 75
           P+A     P        PL S +    + P + P  PG LPA PL    LA   PAA LG
Sbjct: 243 PDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRP-GPGPLPAEPL----LALAGPAAALG 297

Query: 76  PTFPG 80
           P  PG
Sbjct: 298 PLSPG 302



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 14/103 (13%)

Query: 45  PLSSPYPPGGLPASPLPSGPLAPPAPAAPLGPTFPGLGVSGGS------SSSGYGAPGPG 98
           PL  PY P     +P P   L  P P+A  GP+ P    S  S        +G GAP P 
Sbjct: 183 PLPFPYAP----YAPAPGPALLVPPPSAGPGPSPPARLFSVDSLVNLQPELAGLGAPEPP 238

Query: 99  LVHGKEMPKGYRRPLAHAKPP--YSYI--SLITMAIQQAPGKM 137
                +       P A A  P  YS +   L+  A +  PG +
Sbjct: 239 CCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGPGPL 281


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score =  169 bits (427), Expect = 4e-42
 Identities = 84/172 (48%), Positives = 105/172 (61%), Gaps = 16/172 (9%)

Query: 105 MPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNS 164
           MP+  +   +  KPPYSYISL  MAIQ +  KML LS+IY++IM+ FPYYRE+ QRWQNS
Sbjct: 1   MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNS 60

Query: 165 IRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGS 224
           +RH+LSFNDCF+K+ R PD+PGKGS+WALHP  G+MFENG +LRR+KRFK+         
Sbjct: 61  LRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVLRADHTHLH 120

Query: 225 GAATTTRNGTGSAA----------------STTTPAATVTSPPQPPPPAPEP 260
             +T +  G G                              PPQPPPP P P
Sbjct: 121 AGSTKSAPGAGPGGHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPP 172



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 27  PVTPVPTMAPLNSYMTLNPLSSPYPPGGLPASPLPSGPLAPPAPAAPLGPTFPG 80
           P  P P    +  Y    P ++P PP  LP+ P    P  PP  + P  P+ PG
Sbjct: 166 PPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQP----PQQPPQQSQPQQPSHPG 215


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score =  167 bits (423), Expect = 1e-41
 Identities = 115/308 (37%), Positives = 143/308 (46%), Gaps = 64/308 (20%)

Query: 53  GGLPASPLPSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRP 112
           GG  A P P    + PA A      +PG    G + + G   P P             +P
Sbjct: 35  GGYTAMPAPMSVYSHPAHAEQ----YPG----GMARAYGPYTPQP-------------QP 73

Query: 113 LAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFN 172
               KPPYSYI+LITMAIQ AP K +TL+ IYQ+IMD FP+YR+N+Q WQNSIRH+LS N
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLN 133

Query: 173 DCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVK------------ 220
           +CFVKV R   KPGKGSYW L P S NMFENG +LRR++RFK ++ VK            
Sbjct: 134 ECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKE 193

Query: 221 ---KGGSGAATTTRNGTGSAASTTTPA----------ATVTSPPQPPPPA---------- 257
               G            G+A     P            T  SPPQP  PA          
Sbjct: 194 PPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAA 253

Query: 258 -PEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPYNFNHP-------FSINNL 309
            P+ E+            SP  S P    L L G      P   + P       FS++N+
Sbjct: 254 VPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNI 313

Query: 310 MSEQTPAP 317
           M+    +P
Sbjct: 314 MTSLRGSP 321


>gi|4885237 forkhead box C2 [Homo sapiens]
          Length = 501

 Score =  160 bits (404), Expect = 2e-39
 Identities = 102/234 (43%), Positives = 125/234 (53%), Gaps = 32/234 (13%)

Query: 117 KPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFV 176
           KPPYSYI+LITMAIQ AP K +TL+ IYQ+IMD FP+YREN+Q WQNSIRH+LS N+CFV
Sbjct: 72  KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131

Query: 177 KVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGS 236
           KV R   KPGKGSYW L P S NMFENG +LRR++RFK ++  K+    A         S
Sbjct: 132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKEERAHLKEPPPAAS 191

Query: 237 AASTTTP---------------AATVTSPPQP-----PPPAPEPEAQGG-EDVGALDCGS 275
             +  TP                +   SP  P        +PE   QG      +   GS
Sbjct: 192 KGAPATPHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPESALQGSPRSAASTPAGS 251

Query: 276 PASSTPYFTGLELPGELKLDAPYNFNHPFSINNLMSEQTPAP-PKLDVGFGGYG 328
           P  S P         E    AP N    FS+ N+M+ +T  P  +L  G G  G
Sbjct: 252 PDGSLP---------EHHAAAP-NGLPGFSVENIMTLRTSPPGGELSPGAGRAG 295


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score =  159 bits (401), Expect = 5e-39
 Identities = 95/220 (43%), Positives = 113/220 (51%), Gaps = 32/220 (14%)

Query: 65  LAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYIS 124
           LA    AA  G   PG   + G++  G G P  G           R PL   KPPYSYI+
Sbjct: 85  LASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAAT--------RSPLV--KPPYSYIA 134

Query: 125 LITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDK 184
           LITMAI Q+P K LTLSEI ++I   FPYYRE    WQNSIRH+LS NDCFVK+ R P  
Sbjct: 135 LITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGN 194

Query: 185 PGKGSYWALHPSSGNMFENGCYLRRQKRFKLE-------------EKVKKGGSGAA---- 227
           PGKG+YW L P S +MF+NG +LRR+KRFK +             E + +GG+ AA    
Sbjct: 195 PGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPG 254

Query: 228 -----TTTRNGTGSAASTTTPAATVTSPPQPPPPAPEPEA 262
                       G       PA     P   P P P P A
Sbjct: 255 AFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHA 294



 Score = 30.0 bits (66), Expect = 3.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 60  LPSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPG 98
           +P G  A P P  P    F G G +   + +    PGPG
Sbjct: 310 VPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPG 348


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score =  155 bits (392), Expect = 5e-38
 Identities = 85/218 (38%), Positives = 116/218 (53%), Gaps = 19/218 (8%)

Query: 66  APPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISL 125
           A   P  P       +    G +++G G PG     G    +  +RPL   KPPYSYI+L
Sbjct: 3   AESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAG-GRRRKRPLQRGKPPYSYIAL 61

Query: 126 ITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKP 185
           I MAI  AP + LTL  IY++I + FP+YR+N ++WQNSIRH+L+ NDCF+K+ R   +P
Sbjct: 62  IAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRP 121

Query: 186 GKGSYWALHPSSGNMFENGCYLRRQKRFKLEE----KVKKGGSGAATTTRNGTGSAASTT 241
           GKG+YWAL P++ +MFE+G +LRR+KRFK  +          + AA        +AA+  
Sbjct: 122 GKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAAIF 181

Query: 242 TPAATVTSPPQP--------------PPPAPEPEAQGG 265
             A     PP P              PPP   P A  G
Sbjct: 182 PGAVPAARPPYPGAVYAGYAPPSLAAPPPVYYPAASPG 219



 Score = 30.4 bits (67), Expect = 2.5
 Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 12/122 (9%)

Query: 19  PEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPPG--GLPASPLPSGPLAPPAPAAPLGP 76
           P  G VY+   P    AP   Y    P +SP P    GL    +P  PL+P    AP GP
Sbjct: 191 PYPGAVYAGYAPPSLAAPPPVYY---PAASPGPCRVFGL----VPERPLSPELGPAPSGP 243

Query: 77  TFPGLGVSGGSSSSGYGAPGPGLVHGKEM-PKGYRRPLAHAKPPYSYISLITMAIQQAPG 135
                  S G+ ++  G    G    +   P  Y    A+A P  +Y      AI  A G
Sbjct: 244 GGSCAFASAGAPATTTGYQPAGCTGARPANPSAY--AAAYAGPDGAYPQGAGSAIFAAAG 301

Query: 136 KM 137
           ++
Sbjct: 302 RL 303


>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score =  154 bits (390), Expect = 9e-38
 Identities = 125/342 (36%), Positives = 154/342 (45%), Gaps = 61/342 (17%)

Query: 45  PLSSPYPPGGLPASPLPSGPL-APPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGK 103
           PL+ P    G  A P   G + AP A     G      G SGG   +G G+ G GL   K
Sbjct: 78  PLTLPKEAAGAGAGP--GGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAG-GLAPSK 134

Query: 104 EMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQN 163
             PK      +  KPPYSYI+LITMAI Q+P K LTLS I ++I + FPYYRE    WQN
Sbjct: 135 --PKN-----SLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN 187

Query: 164 SIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEK----- 218
           SIRH+LS NDCFVK+ R P  PGKG+YW L P S +MF+NG +LRR+KRFK  ++     
Sbjct: 188 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE 247

Query: 219 ---------------VKKGGSG----------AATTTRNGTGSAASTTTPAATVTSPPQP 253
                             G +G          AA        +AA+    AA +  P   
Sbjct: 248 QTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYAL 307

Query: 254 PPPAPE-PEAQGGEDVGALDCGSPASSTPYFTGLEL--------------PGELKLDAPY 298
           PP AP  P A      G L   + A  +    GL+L               G     A  
Sbjct: 308 PPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASL 367

Query: 299 NFNHP-----FSINNLMSEQTPAPPKLDVGFGGYGAEGGEPG 335
             + P     FSI N++     AP    VG G  G  GG  G
Sbjct: 368 IKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGG 409


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score =  149 bits (376), Expect = 4e-36
 Identities = 96/270 (35%), Positives = 129/270 (47%), Gaps = 24/270 (8%)

Query: 32  PTMAPLNSYMTLNPLSSPYPPGGLPASPLP--SGPLAPPAPAAPLGPTFPGLGVSG--GS 87
           P  A  N Y+ LN      PP    A+       P  PP P A  GP       +G  G 
Sbjct: 45  PPAAAANPYLWLNGPGVGGPPSAAAAAAAAYLGAPPPPPPPGAAAGPFLQPPPAAGTFGC 104

Query: 88  SSSGYGAPGPGLVHGKEMPKG----------YRRPLAH-AKPPYSYISLITMAIQQAPGK 136
           S   +  P P        P G           R  L    +PPYSY +LI MAIQ AP +
Sbjct: 105 SQRPFAQPAPAAPASPAAPAGPGELGWLSMASREDLMKMVRPPYSYSALIAMAIQSAPER 164

Query: 137 MLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPS 196
            LTLS IYQ++ D FP+Y+ ++  WQNSIRH+LS NDCF KV R  D PGKG+YW L P+
Sbjct: 165 KLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPN 224

Query: 197 SGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQP--- 253
              MF+NG + R++KR     +   G + AA T+++  G ++   +          P   
Sbjct: 225 CEKMFDNGNFRRKRKR---RSEASNGSTVAAGTSKSEEGLSSGLGSGVGGKPEEESPSTL 281

Query: 254 --PPPAPEPEAQGGEDVGALDCGSPASSTP 281
             P  +PEP  +G +   +   G   +STP
Sbjct: 282 LRPSHSPEP-PEGTKSTASSPGGPMLTSTP 310


>gi|22779860 forkhead box L1 [Homo sapiens]
          Length = 345

 Score =  147 bits (370), Expect = 2e-35
 Identities = 122/322 (37%), Positives = 157/322 (48%), Gaps = 62/322 (19%)

Query: 64  PLAPPAPAAPL----GPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPP 119
           P  P   A+P+    GP  PGL ++   +++   A G       E P+         KPP
Sbjct: 7   PRLPALAASPMLYLYGPERPGLPLAFAPAAA-LAASGRA-----ETPQ---------KPP 51

Query: 120 YSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVA 179
           YSYI+LI MAIQ AP + +TL+ IYQ+IMD FP+Y +N+Q WQNSIRH+LS NDCFVKV 
Sbjct: 52  YSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVP 111

Query: 180 RSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFK------------------LEEKVKK 221
           R   +PGKGSYW L P   +MFENG Y RR+++ K                    E   +
Sbjct: 112 REKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPE 171

Query: 222 GGSGAATTTRNGTGSAASTTTPAATVTSP----PQPPPPAPEP-EAQGGEDVGALDCGS- 275
            GSGA      G+G A S    A    SP    P PP P   P  A   ED G    G+ 
Sbjct: 172 AGSGA-----GGSGPAISRLQAAPAGPSPLLDGPSPPAPLHWPGTASPNEDAGDAAQGAA 226

Query: 276 -----PASSTPYFTGLEL-PGELKLDAPYNFNHPFSINNLMS-EQTPAPPKLDVGFGGYG 328
                 A+ T    G  L P         + +  FSI+++++ +Q   PP  D   G  G
Sbjct: 227 AVAVGQAARTGDGPGSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPSGDELLG--G 284

Query: 329 AEGGEPGVYYQGLYSRSLLNAS 350
           A+ G PG    G    SLL AS
Sbjct: 285 AKPG-PG----GRLGASLLAAS 301


>gi|28973785 forkhead box S1 [Homo sapiens]
          Length = 330

 Score =  145 bits (366), Expect = 5e-35
 Identities = 81/170 (47%), Positives = 100/170 (58%), Gaps = 7/170 (4%)

Query: 117 KPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFV 176
           KPPYSYI+LI MAIQ +PG+  TLS IY++IM  F +YR N+  WQNSIRH+LS N+CFV
Sbjct: 18  KPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFV 77

Query: 177 KVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGS 236
           KV R   KPGKGSYW L P   +MFE+G +LRR++RF  +   +  G+      R G   
Sbjct: 78  KVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRFTRQTGAE--GTRGPAKARRGPLR 135

Query: 237 AASTT--TPAATVTSPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFT 284
           A S     P AT       PP  P+P+   G   G L    PAS  P  T
Sbjct: 136 ATSQDPGVPNATTGRQCSFPPELPDPK---GLSFGGLVGAMPASMCPATT 182


>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score =  143 bits (361), Expect = 2e-34
 Identities = 104/305 (34%), Positives = 137/305 (44%), Gaps = 34/305 (11%)

Query: 52  PGGLPASPLPSGPLAPPAPAAPLGPTFPGLGVSGGS------------------SSSGYG 93
           PG L A+ +   P A  A AA    T      S  S                   S+G G
Sbjct: 20  PGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGG 79

Query: 94  APGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPY 153
             G G    K+   G RRP    KPPYSYI+LI MAIQ +P K LTLSEIYQ++   FP+
Sbjct: 80  GAGAGSGGAKKASSGLRRP---EKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPF 136

Query: 154 YRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRF 213
           +R   Q W+NS+RH+LS N+CF+K+ +   +PGKG YW + P+S  MFE G + RR + F
Sbjct: 137 FRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGF 196

Query: 214 KLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAPEPEAQGGEDVGALDC 273
           + + +  K          +G G  AS         +PP  P         GG D+     
Sbjct: 197 RRKCQALKPMYHRVV---SGLGFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDM----- 248

Query: 274 GSPASSTPYFTGLELPGELKLDAPYNFNHPFSINNLMSEQTPAPPKLDVGFGGYGAEGGE 333
             PA    Y  G   P        ++ + P    N  S    + P +  G GG GA GG 
Sbjct: 249 -MPAG---YDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCP-VPAGPGGVGAAGGG 303

Query: 334 PGVYY 338
            G  Y
Sbjct: 304 GGGDY 308


>gi|195947376 forkhead box I2 [Homo sapiens]
          Length = 318

 Score =  143 bits (360), Expect = 3e-34
 Identities = 88/220 (40%), Positives = 118/220 (53%), Gaps = 16/220 (7%)

Query: 50  YPPGGLPASPLPSGPLA-PPAPAAPLGPTFPGLGVSGGSSSSGYGAPGP-----GLVHGK 103
           Y PG L A  +  GPL    APA        G G +   ++  YGAPGP     G + G 
Sbjct: 27  YEPGDLGA--VGGGPLLWVNAPALSPKSYASGPGPAPPYAAPSYGAPGPLLGAPGGLAGA 84

Query: 104 EMP----KGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQ 159
           ++      G +  L   +PPYSY +LI MAIQ AP + LTLS+IYQ++   FP+Y+ ++ 
Sbjct: 85  DLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKA 144

Query: 160 RWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKV 219
            WQNSIRH+LS NDCF KV R  D PGKG+YW L P+   MF+NG + R++KR       
Sbjct: 145 GWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRAEASAA 204

Query: 220 KKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAPE 259
            + G+ +      G  + A     AA +     P P APE
Sbjct: 205 VRSGARSV----GGAEAPALEPPSAACLDLQASPSPSAPE 240


>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
          Length = 408

 Score =  141 bits (356), Expect = 8e-34
 Identities = 85/194 (43%), Positives = 106/194 (54%), Gaps = 8/194 (4%)

Query: 75  GPTFPGLGVSGGSSS--SGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQ 132
           G   P   + GG  S  S +G             +  R+P   AKPPYSYI+LITMAI Q
Sbjct: 66  GVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQ 122

Query: 133 APGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWA 192
           +P K LTLS I  +I   FPYYR     WQNSIRH+LS NDCFVK+ R P  PGKG+YW+
Sbjct: 123 SPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTYWS 182

Query: 193 LHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSP-- 250
           L P+S +MF+NG +LRR+KRFK   ++  G             +A     P   + +P  
Sbjct: 183 LDPASQDMFDNGSFLRRRKRFK-RHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPAL 241

Query: 251 PQPPPPAPEPEAQG 264
           PQP P A    A G
Sbjct: 242 PQPVPGAYPNTAPG 255


>gi|75677594 forkhead box D4 [Homo sapiens]
          Length = 439

 Score =  141 bits (356), Expect = 8e-34
 Identities = 79/177 (44%), Positives = 99/177 (55%), Gaps = 5/177 (2%)

Query: 82  GVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLS 141
           G  G S  S +G             +  R+P   AKPP SYI+LITMAI Q+P K LTLS
Sbjct: 72  GGGGPSDPSEFGTEFRAPPRSAAASEDARQP---AKPPSSYIALITMAILQSPHKRLTLS 128

Query: 142 EIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMF 201
            I  +I D FPYYR     WQNSIRH+LS NDCFVK+ R P +PGKG+YW+L P+S +MF
Sbjct: 129 GICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMF 188

Query: 202 ENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAP 258
           +NG +LRR+KRF+  +     G+            AA        +   P PP P P
Sbjct: 189 DNGSFLRRRKRFQRHQPTP--GAHLPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVP 243


>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
          Length = 417

 Score =  141 bits (355), Expect = 1e-33
 Identities = 80/177 (45%), Positives = 97/177 (54%), Gaps = 5/177 (2%)

Query: 82  GVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLS 141
           G  G S  S +G             +  R+P   AKPPYSYI+LITMAI Q P K LTLS
Sbjct: 76  GGGGPSDPSEFGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLS 132

Query: 142 EIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMF 201
            I  +I   FPYYR     WQNSIRH+LS NDCFVK+ R P  PGKG+YW+L P+S +MF
Sbjct: 133 GICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMF 192

Query: 202 ENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAP 258
           +NG +LRR+KRFK  +     G+            AA        +   P PP P P
Sbjct: 193 DNGSFLRRRKRFKRHQLTP--GAHLPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVP 247


>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
          Length = 416

 Score =  141 bits (355), Expect = 1e-33
 Identities = 80/177 (45%), Positives = 97/177 (54%), Gaps = 5/177 (2%)

Query: 82  GVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLS 141
           G  G S  S +G             +  R+P   AKPPYSYI+LITMAI Q P K LTLS
Sbjct: 76  GGGGPSDPSEFGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLS 132

Query: 142 EIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMF 201
            I  +I   FPYYR     WQNSIRH+LS NDCFVK+ R P  PGKG+YW+L P+S +MF
Sbjct: 133 GICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMF 192

Query: 202 ENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAP 258
           +NG +LRR+KRFK  +     G+            AA        +   P PP P P
Sbjct: 193 DNGSFLRRRKRFKRHQLTP--GAHLPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVP 247


>gi|187423902 forkhead box D4-like 5 [Homo sapiens]
          Length = 416

 Score =  141 bits (355), Expect = 1e-33
 Identities = 80/177 (45%), Positives = 97/177 (54%), Gaps = 5/177 (2%)

Query: 82  GVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLS 141
           G  G S  S +G             +  R+P   AKPPYSYI+LITMAI Q P K LTLS
Sbjct: 76  GGGGPSDPSEFGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLS 132

Query: 142 EIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMF 201
            I  +I   FPYYR     WQNSIRH+LS NDCFVK+ R P  PGKG+YW+L P+S +MF
Sbjct: 133 GICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMF 192

Query: 202 ENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAP 258
           +NG +LRR+KRFK  +     G+            AA        +   P PP P P
Sbjct: 193 DNGSFLRRRKRFKRHQLTP--GAHLPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVP 247


>gi|146262007 forkhead box D4-like 6 [Homo sapiens]
          Length = 417

 Score =  141 bits (355), Expect = 1e-33
 Identities = 80/177 (45%), Positives = 97/177 (54%), Gaps = 5/177 (2%)

Query: 82  GVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLS 141
           G  G S  S +G             +  R+P   AKPPYSYI+LITMAI Q P K LTLS
Sbjct: 76  GGGGPSDPSEFGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLS 132

Query: 142 EIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMF 201
            I  +I   FPYYR     WQNSIRH+LS NDCFVK+ R P  PGKG+YW+L P+S +MF
Sbjct: 133 GICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMF 192

Query: 202 ENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAP 258
           +NG +LRR+KRFK  +     G+            AA        +   P PP P P
Sbjct: 193 DNGSFLRRRKRFKRHQLTP--GAHLPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVP 247


>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
          Length = 416

 Score =  141 bits (355), Expect = 1e-33
 Identities = 80/177 (45%), Positives = 97/177 (54%), Gaps = 5/177 (2%)

Query: 82  GVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLS 141
           G  G S  S +G             +  R+P   AKPPYSYI+LITMAI Q P K LTLS
Sbjct: 76  GGGGPSDPSEFGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLS 132

Query: 142 EIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMF 201
            I  +I   FPYYR     WQNSIRH+LS NDCFVK+ R P  PGKG+YW+L P+S +MF
Sbjct: 133 GICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMF 192

Query: 202 ENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAP 258
           +NG +LRR+KRFK  +     G+            AA        +   P PP P P
Sbjct: 193 DNGSFLRRRKRFKRHQLTP--GAHLPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVP 247


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score =  140 bits (353), Expect = 2e-33
 Identities = 100/263 (38%), Positives = 124/263 (47%), Gaps = 39/263 (14%)

Query: 27  PVTPVPTMAPLNSYMTLNPLSSPYPPG--GLPASP---------LPSGPLAPPAPA---- 71
           P  P P   P        P  +P PP   G PA+          LP  P  PPA A    
Sbjct: 60  PPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPPPPPPPAAALDGA 119

Query: 72  ------------------APLGPTFPGLGV-SGGSSSSGYGAPGPGLVHGKEMPKGYRRP 112
                             AP+GP     G  +GG    G G  G     GKE   G ++ 
Sbjct: 120 KADGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEGGKE---GEKKN 176

Query: 113 LAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFN 172
             + KPP+SY +LI MAI+Q+P K LTL+ IY++IM  FPYYREN+Q WQNSIRH+LS N
Sbjct: 177 GKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLN 236

Query: 173 DCFVKVARSPDKPGKGSYWALHPSSGNMFENGC--YLRRQKRFKLEEKVKKGGSGAATTT 230
            CFVKV R  D PGKG+YW L PSS ++F  G    LRR+      +   K G+   +T 
Sbjct: 237 KCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKLAFKRGARLTSTG 296

Query: 231 RNGTGSAASTTTPAATVTSPPQP 253
                 A S   P +   S   P
Sbjct: 297 LTFMDRAGSLYWPMSPFLSLHHP 319



 Score = 32.3 bits (72), Expect = 0.65
 Identities = 30/100 (30%), Positives = 32/100 (32%), Gaps = 38/100 (38%)

Query: 243 PAATVTSPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPYNFNH 302
           P      PP PPPPAP+P    G      D G              P +L L  P     
Sbjct: 67  PPPQQQQPPPPPPPAPQPPQTRGAPAADDDKG--------------PQQLLLPPP----- 107

Query: 303 PFSINNLMSEQTPAPP-------KLDVGFGGYGAEGGEPG 335
                       P PP       K D G GG G  GG PG
Sbjct: 108 -----------PPPPPAAALDGAKAD-GLGGKGEPGGGPG 135



 Score = 30.4 bits (67), Expect = 2.5
 Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 19/112 (16%)

Query: 233 GTGSAASTTTPAATVTSPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFTGLELPGEL 292
           G  +A     P   +  PP PPPPA   +    + +G    G P            PGEL
Sbjct: 89  GAPAADDDKGPQQLLLPPPPPPPPAAALDGAKADGLGGK--GEPGGG---------PGEL 137

Query: 293 KLDAPYNFNHPFSINNLMSEQTPAPPKLDVGFGGYGAEGGEPGVYYQGLYSR 344
              AP   +          E+     K   G GG   EGG+ G    G Y +
Sbjct: 138 ---APVGPDEKEKGAGAGGEE-----KKGAGEGGKDGEGGKEGEKKNGKYEK 181


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score =  132 bits (333), Expect = 4e-31
 Identities = 64/139 (46%), Positives = 86/139 (61%), Gaps = 3/139 (2%)

Query: 76  PTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPG 135
           P   G G  GG   +       G    K+   G RRP    KPPYSYI+LI MAIQ +P 
Sbjct: 10  PPHGGGGGGGGGGGAAMDPASSGPSKAKKTNAGIRRP---EKPPYSYIALIVMAIQSSPT 66

Query: 136 KMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHP 195
           K LTLSEIYQ++   FP++R + Q W+NS+RH+LS N+CF+K+ +   +PGKG YW + P
Sbjct: 67  KRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDP 126

Query: 196 SSGNMFENGCYLRRQKRFK 214
           +S  MFE G + RR + F+
Sbjct: 127 ASEFMFEEGSFRRRPRGFR 145


>gi|21618327 forkhead box I1 isoform a [Homo sapiens]
          Length = 378

 Score =  132 bits (333), Expect = 4e-31
 Identities = 89/231 (38%), Positives = 114/231 (49%), Gaps = 30/231 (12%)

Query: 42  TLNPLSSPYPPGGLPASPLPSGPLAPPAPAA-----PLGPTFPGLGVSGGSSSSGYGAPG 96
           T NP      P   P   LP    +P  P A     PL P+  GLG   GS       P 
Sbjct: 58  TPNPYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLG---GSDLGWLPIPS 114

Query: 97  PGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRE 156
                 +E+ K  R       PPYSY +LI MAI  AP K LTLS+IYQ++ D FP+Y +
Sbjct: 115 Q-----EELMKLVR-------PPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNK 162

Query: 157 NQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLE 216
           ++  WQNSIRH+LS NDCF KV R  D PGKG+YW L P+   MF+NG + R++KR K +
Sbjct: 163 SKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR-KSD 221

Query: 217 EKVKKGGSGAATTTRNGTGSAASTT---------TPAATVTSPPQPPPPAP 258
                       T  +    +  TT         +P  T +SP + P P P
Sbjct: 222 VSSSTASLALEKTESSLPVDSPKTTEPQDILDGASPGGTTSSPEKRPSPPP 272


>gi|145309320 forkhead box Q1 [Homo sapiens]
          Length = 403

 Score =  126 bits (316), Expect = 3e-29
 Identities = 80/219 (36%), Positives = 106/219 (48%), Gaps = 21/219 (9%)

Query: 63  GPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSY 122
           GP A  A  A         G   G++  G G  G G   G       RRP    KPPYSY
Sbjct: 71  GPGAEEAIPAAAAAAVVAEGAEAGAAGPGAGGAGSG--EGARSKPYTRRP----KPPYSY 124

Query: 123 ISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSP 182
           I+LI MAI+ + G  LTL+EI +++M  FP++R +   W+NS+RH+LS NDCFVKV R P
Sbjct: 125 IALIAMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRDP 184

Query: 183 DKP-GKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTT 241
            +P GK +YW L+P+S   F +G + RR+KR      V   G                  
Sbjct: 185 SRPWGKDNYWMLNPNSEYTFADGVFRRRRKRLSHRAPVPAPG-------------LRPEE 231

Query: 242 TPAATVTSPPQPPPPA-PEPEAQGGEDVGALDCGSPASS 279
            P      PP P  PA P   +   ++  A   G  +SS
Sbjct: 232 APGLPAAPPPAPAAPASPRMRSPARQEERASPAGKFSSS 270



 Score = 28.9 bits (63), Expect = 7.2
 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 48  SPYPPGGLPASPLPSGPLA-PPAPAAPLGP 76
           +P P  GL     P  P A PPAPAAP  P
Sbjct: 220 APVPAPGLRPEEAPGLPAAPPPAPAAPASP 249


>gi|50301236 forkhead box J1 [Homo sapiens]
          Length = 421

 Score =  125 bits (314), Expect = 6e-29
 Identities = 71/184 (38%), Positives = 91/184 (49%), Gaps = 18/184 (9%)

Query: 37  LNSYMTLNPLSSPYPPGG--------LPASPLPSGPLA--PPAPAAPLGPTFPGLGVSGG 86
           L  +  LN  +   PPGG        +P S  P  PLA  P     P  P  P    +  
Sbjct: 39  LQEFSILNAKAPALPPGGTDPHGYHQVPGSAAPGSPLAADPACLGQPHTPGKPTSSCTSR 98

Query: 87  SSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQW 146
           S+  G  AP P  V     P        H KPPYSY +LI MA+Q +    +TLS IY+W
Sbjct: 99  SAPPGLQAPPPDDVDYATNP--------HVKPPYSYATLICMAMQASKATKITLSAIYKW 150

Query: 147 IMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCY 206
           I D F Y+R     WQNSIRH+LS N CF+KV R  D+PGKG +W + P       +G +
Sbjct: 151 ITDNFCYFRHADPTWQNSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAF 210

Query: 207 LRRQ 210
            +R+
Sbjct: 211 KKRR 214


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.134    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,745,462
Number of Sequences: 37866
Number of extensions: 1345920
Number of successful extensions: 22974
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 848
Number of HSP's that attempted gapping in prelim test: 11948
Number of HSP's gapped (non-prelim): 9478
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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