Guide to the Human Genome
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Name: HPX-2 Sequence: fasta or formatted (422aa) NCBI GI: 239758086
Description:

PREDICTED: similar to double homeobox, 4

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt prot [479aa] PREDICTED: similar to double homeobox, 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.2         60           2
 C cysteine            1.7          7           1
 D aspartate           1.7          7           1
 E glutamate           6.9         29           2
 F phenylalanine       2.1          9           1
 G glycine             8.5         36           1
 H histidine           2.4         10           2
 I isoleucine          1.9          8           1
 K lysine              1.2          5           1
 L leucine             8.8         37           3
 M methionine          0.7          3           1
 N asparagine          1.2          5           1
 P proline            13.0         55           2
 Q glutamine           7.8         33           2
 R arginine            9.5         40           4
 S serine              6.2         26           2
 T threonine           3.8         16           2
 V valine              4.3         18           1
 W tryptophan          3.1         13           1
 X unknown             0.5          2           1
 Y tyrosine            0.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to double homeobox, 4 
LOC100289581          0.789   PREDICTED: hypothetical protein XP_002343082 
LOC440017             0.787   PREDICTED: similar to double homeobox, 4 
LOC728022             0.787   PREDICTED: similar to double homeobox, 4 
LOC399839             0.787   PREDICTED: similar to double homeobox, 4 
LOC440013             0.787   PREDICTED: similar to double homeobox, 4 
LOC440014             0.784   PREDICTED: similar to double homeobox, 4 
LOC441056             0.784   PREDICTED: double homeobox, 4-like 
LOC653548             0.781   PREDICTED: double homeobox, 4-like 
DUX4                  0.781   double homeobox, 4 
LOC728410             0.781   double homeobox, 4-like 
LOC653543             0.781   double homeobox, 4-like 
LOC653545             0.781   double homeobox, 4-like 
LOC653544             0.781   double homeobox, 4-like 
LOC652119             0.697   PREDICTED: similar to putative DUX4 protein 
LOC652119             0.695   PREDICTED: similar to putative DUX4 protein 
HPX-2                 0.669   PREDICTED: similar to double homeobox, 4 
LOC100290397          0.529   PREDICTED: hypothetical protein XP_002348309, parti...
LOC100288801          0.396   PREDICTED: hypothetical protein XP_002342402 
LOC652586             0.316   PREDICTED: similar to facioscapulohumeral muscular ...
LOC100134409          0.298   PREDICTED: similar to facioscapulohumeral muscular ...
LOC100290743          0.298   PREDICTED: hypothetical protein XP_002346688 
DUX5                  0.230   double homeobox, 5 
DUX1                  0.230   double homeobox, 1 
DUX3                  0.227   double homeobox, 3 
LOC100292644          0.139   PREDICTED: similar to facioscapulohumeral muscular ...
DUXA                  0.085   double homeobox A 
LOC100291517          0.084   PREDICTED: hypothetical protein XP_002347726 
LOC100289629          0.084   PREDICTED: hypothetical protein XP_002344158 
ARX                   0.052   aristaless related homeobox 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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