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Search of human proteins with 239752592
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752592 PREDICTED: hypothetical protein XP_002348308,
partial [Homo sapiens]
(94 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752592 PREDICTED: hypothetical protein XP_002348308, parti... 203 3e-53
gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo ... 199 5e-52
gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo sap... 197 2e-51
gi|14670354 general transcription factor II, i isoform 3 [Homo s... 129 7e-31
gi|14670352 general transcription factor II, i isoform 2 [Homo s... 129 7e-31
gi|14670350 general transcription factor II, i isoform 1 [Homo s... 129 7e-31
gi|169881252 general transcription factor II, i isoform 4 [Homo ... 129 7e-31
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 118 1e-27
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 118 1e-27
gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo sapi... 64 3e-11
gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo sap... 64 3e-11
gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens] 38 0.002
gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens] 38 0.002
gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens] 38 0.002
gi|10518503 coagulation factor VII isoform b precursor [Homo sap... 29 0.93
gi|4503645 coagulation factor VII isoform a precursor [Homo sapi... 29 0.93
gi|33636771 myelin-associated oligodendrocyte basic protein [Hom... 28 1.6
gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens] 28 2.1
gi|14211837 cryptic [Homo sapiens] 27 2.7
gi|4503649 coagulation factor IX preproprotein [Homo sapiens] 27 3.5
gi|22749191 tetratricopeptide repeat domain 39B [Homo sapiens] 27 3.5
gi|193083168 ectonucleoside triphosphate diphosphohydrolase 4 is... 27 3.5
gi|4758662 ectonucleoside triphosphate diphosphohydrolase 4 isof... 27 3.5
gi|90403581 meiosis defective 1 [Homo sapiens] 27 4.6
gi|118600995 cripto, FRL-1, cryptic family 1B [Homo sapiens] 27 4.6
gi|228480209 four and a half LIM domains 1 isoform 3 [Homo sapiens] 26 6.0
gi|228480205 four and a half LIM domains 1 isoform 5 [Homo sapiens] 26 6.0
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s... 26 6.0
gi|122937283 6720455I24Rik homolog [Homo sapiens] 26 6.0
gi|153792780 additional sex combs like 2 [Homo sapiens] 26 6.0
>gi|239752592 PREDICTED: hypothetical protein XP_002348308,
partial [Homo sapiens]
Length = 94
Score = 203 bits (516), Expect = 3e-53
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQG 60
KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQG
Sbjct: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQG 60
Query: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
LPEGVAFKHPENYDLATLEWILEYTAGISFIIKR
Sbjct: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
>gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo
sapiens]
Length = 145
Score = 199 bits (505), Expect = 5e-52
Identities = 92/94 (97%), Positives = 92/94 (97%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQG 60
KVYNPGESDECRCCRNGNTRKKTVEDYFCFCC K LQKPTEVPVPYEKMLQDQSALIVQG
Sbjct: 52 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG 111
Query: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
LPEGVAFKHPENYDLATLEWILEYTAGISFIIKR
Sbjct: 112 LPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 145
>gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo
sapiens]
Length = 304
Score = 197 bits (500), Expect = 2e-51
Identities = 91/93 (97%), Positives = 91/93 (97%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQG 60
KVYNPGESDECRCCRNGNTRKKTVEDYFCFCC K LQKPTEVPVPYEKMLQDQSALIVQG
Sbjct: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG 60
Query: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
LPEGVAFKHPENYDLATLEWILEYTAGISFIIK
Sbjct: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
>gi|14670354 general transcription factor II, i isoform 3 [Homo
sapiens]
Length = 977
Score = 129 bits (323), Expect = 7e-31
Identities = 62/76 (81%), Positives = 67/76 (88%)
Query: 19 TRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
T +KTVEDYFCFC K L K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 79 EWILEYTAGISFIIKR 94
+WILE AGISFIIKR
Sbjct: 171 KWILENKAGISFIIKR 186
Score = 48.9 bits (115), Expect = 9e-07
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K V+ FC + L VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 446 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 505
Query: 81 ILEYTAGISFIIKR 94
I++ I F+IKR
Sbjct: 506 IIQVGNRIKFVIKR 519
Score = 47.0 bits (110), Expect = 3e-06
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
K+ VE+ F C + L V VP+ V+GLPEGV F+ P + + LE
Sbjct: 713 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 772
Query: 81 ILEYTAGISFIIKR 94
IL A I FIIK+
Sbjct: 773 ILRNKAKIKFIIKK 786
Score = 45.4 bits (106), Expect = 1e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + ++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 341 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 400
Query: 81 ILEYTAGISFIIKR 94
IL I F+IK+
Sbjct: 401 ILLAKERIRFVIKK 414
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + L V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 551 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 610
Query: 81 ILEYTAGISFIIKR 94
I+ + I F++K+
Sbjct: 611 IVRGSNKIKFVVKK 624
Score = 40.0 bits (92), Expect = 4e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
V VPY K+ + ++V G+P GV+FK P +++++ IL+ I F + R
Sbjct: 869 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIR 921
>gi|14670352 general transcription factor II, i isoform 2 [Homo
sapiens]
Length = 978
Score = 129 bits (323), Expect = 7e-31
Identities = 62/76 (81%), Positives = 67/76 (88%)
Query: 19 TRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
T +KTVEDYFCFC K L K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 79 EWILEYTAGISFIIKR 94
+WILE AGISFIIKR
Sbjct: 171 KWILENKAGISFIIKR 186
Score = 48.9 bits (115), Expect = 9e-07
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K V+ FC + L VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 447 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 506
Query: 81 ILEYTAGISFIIKR 94
I++ I F+IKR
Sbjct: 507 IIQVGNRIKFVIKR 520
Score = 47.0 bits (110), Expect = 3e-06
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
K+ VE+ F C + L V VP+ V+GLPEGV F+ P + + LE
Sbjct: 714 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 773
Query: 81 ILEYTAGISFIIKR 94
IL A I FIIK+
Sbjct: 774 ILRNKAKIKFIIKK 787
Score = 45.4 bits (106), Expect = 1e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + ++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 342 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 401
Query: 81 ILEYTAGISFIIKR 94
IL I F+IK+
Sbjct: 402 ILLAKERIRFVIKK 415
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + L V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 552 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 611
Query: 81 ILEYTAGISFIIKR 94
I+ + I F++K+
Sbjct: 612 IVRGSNKIKFVVKK 625
Score = 40.0 bits (92), Expect = 4e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
V VPY K+ + ++V G+P GV+FK P +++++ IL+ I F + R
Sbjct: 870 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIR 922
>gi|14670350 general transcription factor II, i isoform 1 [Homo
sapiens]
Length = 998
Score = 129 bits (323), Expect = 7e-31
Identities = 62/76 (81%), Positives = 67/76 (88%)
Query: 19 TRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
T +KTVEDYFCFC K L K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 79 EWILEYTAGISFIIKR 94
+WILE AGISFIIKR
Sbjct: 171 KWILENKAGISFIIKR 186
Score = 48.9 bits (115), Expect = 9e-07
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K V+ FC + L VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 467 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 526
Query: 81 ILEYTAGISFIIKR 94
I++ I F+IKR
Sbjct: 527 IIQVGNRIKFVIKR 540
Score = 47.0 bits (110), Expect = 3e-06
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
K+ VE+ F C + L V VP+ V+GLPEGV F+ P + + LE
Sbjct: 734 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 793
Query: 81 ILEYTAGISFIIKR 94
IL A I FIIK+
Sbjct: 794 ILRNKAKIKFIIKK 807
Score = 45.4 bits (106), Expect = 1e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + ++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 362 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 421
Query: 81 ILEYTAGISFIIKR 94
IL I F+IK+
Sbjct: 422 ILLAKERIRFVIKK 435
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + L V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 572 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 631
Query: 81 ILEYTAGISFIIKR 94
I+ + I F++K+
Sbjct: 632 IVRGSNKIKFVVKK 645
Score = 40.0 bits (92), Expect = 4e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
V VPY K+ + ++V G+P GV+FK P +++++ IL+ I F + R
Sbjct: 890 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIR 942
>gi|169881252 general transcription factor II, i isoform 4 [Homo
sapiens]
Length = 957
Score = 129 bits (323), Expect = 7e-31
Identities = 62/76 (81%), Positives = 67/76 (88%)
Query: 19 TRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
T +KTVEDYFCFC K L K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 79 EWILEYTAGISFIIKR 94
+WILE AGISFIIKR
Sbjct: 171 KWILENKAGISFIIKR 186
Score = 48.9 bits (115), Expect = 9e-07
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K V+ FC + L VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 426 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 485
Query: 81 ILEYTAGISFIIKR 94
I++ I F+IKR
Sbjct: 486 IIQVGNRIKFVIKR 499
Score = 47.0 bits (110), Expect = 3e-06
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
K+ VE+ F C + L V VP+ V+GLPEGV F+ P + + LE
Sbjct: 693 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 752
Query: 81 ILEYTAGISFIIKR 94
IL A I FIIK+
Sbjct: 753 ILRNKAKIKFIIKK 766
Score = 45.4 bits (106), Expect = 1e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + ++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 321 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 380
Query: 81 ILEYTAGISFIIKR 94
IL I F+IK+
Sbjct: 381 ILLAKERIRFVIKK 394
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + L V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 531 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 590
Query: 81 ILEYTAGISFIIKR 94
I+ + I F++K+
Sbjct: 591 IVRGSNKIKFVVKK 604
Score = 40.0 bits (92), Expect = 4e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
V VPY K+ + ++V G+P GV+FK P +++++ IL+ I F + R
Sbjct: 849 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIR 901
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 118 bits (295), Expect = 1e-27
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VEDYFCFC K L VPVPYEKML+DQSA++VQGLPEGVAF+HPENYDLATL+W
Sbjct: 108 RKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKW 167
Query: 81 ILEYTAGISFIIKR 94
ILE AGISFII R
Sbjct: 168 ILENKAGISFIINR 181
Score = 39.7 bits (91), Expect = 5e-04
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
V VPY K+ + +++ G+P GV FK P +++++ ILE I F + R
Sbjct: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIR 406
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 118 bits (295), Expect = 1e-27
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VEDYFCFC K L VPVPYEKML+DQSA++VQGLPEGVAF+HPENYDLATL+W
Sbjct: 108 RKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKW 167
Query: 81 ILEYTAGISFIIKR 94
ILE AGISFII R
Sbjct: 168 ILENKAGISFIINR 181
Score = 39.7 bits (91), Expect = 5e-04
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
V VPY K+ + +++ G+P GV FK P +++++ ILE I F + R
Sbjct: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIR 406
>gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo
sapiens]
Length = 959
Score = 63.5 bits (153), Expect = 3e-11
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + L + + VP+PYE++L++ L VQGLPEG+AF+ P YD L
Sbjct: 129 RKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMA 188
Query: 81 ILEYTAGISFIIKR 94
ILE++ I F +KR
Sbjct: 189 ILEHSHRIRFKLKR 202
Score = 50.8 bits (120), Expect = 2e-07
Identities = 29/74 (39%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE F K + V VPY K L L V GLPEG++ + P + +A L
Sbjct: 566 RKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRK 625
Query: 81 ILEYTAGISFIIKR 94
ILE + I F+IKR
Sbjct: 626 ILEASNSIQFVIKR 639
Score = 49.3 bits (116), Expect = 7e-07
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 18 NTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V+ F + L VPVPY K+ D A+ + G+P+ + FK P Y +
Sbjct: 349 NTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPK 408
Query: 78 LEWILEYTAGISFIIKR 94
L+ ILE I FIIKR
Sbjct: 409 LKRILEERHSIHFIIKR 425
Score = 43.1 bits (100), Expect = 5e-05
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 18 NTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V+D F + L V VPY+++ + ++I++GLP G+ F+ P +
Sbjct: 703 NTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQN 762
Query: 78 LEWILEYTAGISFIIKR 94
LE IL I F + R
Sbjct: 763 LERILAVADKIKFTVTR 779
Score = 38.1 bits (87), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFII 92
V VPY+ + A+ V GLP+ + F++P YD+ LE IL+ + +I
Sbjct: 824 VLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVI 874
>gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo
sapiens]
Length = 944
Score = 63.5 bits (153), Expect = 3e-11
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F + L + + VP+PYE++L++ L VQGLPEG+AF+ P YD L
Sbjct: 129 RKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMA 188
Query: 81 ILEYTAGISFIIKR 94
ILE++ I F +KR
Sbjct: 189 ILEHSHRIRFKLKR 202
Score = 50.8 bits (120), Expect = 2e-07
Identities = 29/74 (39%), Positives = 38/74 (51%)
Query: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE F K + V VPY K L L V GLPEG++ + P + +A L
Sbjct: 566 RKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRK 625
Query: 81 ILEYTAGISFIIKR 94
ILE + I F+IKR
Sbjct: 626 ILEASNSIQFVIKR 639
Score = 49.3 bits (116), Expect = 7e-07
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 18 NTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V+ F + L VPVPY K+ D A+ + G+P+ + FK P Y +
Sbjct: 349 NTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPK 408
Query: 78 LEWILEYTAGISFIIKR 94
L+ ILE I FIIKR
Sbjct: 409 LKRILEERHSIHFIIKR 425
Score = 43.1 bits (100), Expect = 5e-05
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 18 NTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V+D F + L V VPY+++ + ++I++GLP G+ F+ P +
Sbjct: 688 NTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQN 747
Query: 78 LEWILEYTAGISFIIKR 94
LE IL I F + R
Sbjct: 748 LERILAVADKIKFTVTR 764
Score = 38.1 bits (87), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFII 92
V VPY+ + A+ V GLP+ + F++P YD+ LE IL+ + +I
Sbjct: 809 VLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVI 859
>gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 298
Score = 37.7 bits (86), Expect = 0.002
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 56 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
L V GLPEG++ + P + +A L ILE + I F+IKR
Sbjct: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKR 44
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 18 NTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V++ F + L V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
Query: 78 LEWILEYTAGISFIIKR 94
LE IL I+F + R
Sbjct: 166 LERILAMANKITFTVTR 182
>gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 37.7 bits (86), Expect = 0.002
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 56 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
L V GLPEG++ + P + +A L ILE + I F+IKR
Sbjct: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKR 44
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 18 NTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V++ F + L V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
Query: 78 LEWILEYTAGISFIIKR 94
LE IL I+F + R
Sbjct: 166 LERILAMANKITFTVTR 182
>gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 37.7 bits (86), Expect = 0.002
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 56 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
L V GLPEG++ + P + +A L ILE + I F+IKR
Sbjct: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKR 44
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 18 NTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V++ F + L V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
Query: 78 LEWILEYTAGISFIIKR 94
LE IL I+F + R
Sbjct: 166 LERILAMANKITFTVTR 182
>gi|10518503 coagulation factor VII isoform b precursor [Homo
sapiens]
Length = 444
Score = 28.9 bits (63), Expect = 0.93
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 3 YNPGESDECRCCRNGNTRKKTVEDYFCFC 31
Y+ G+ C+NG + K ++ Y CFC
Sbjct: 82 YSDGDQCASSPCQNGGSCKDQLQSYICFC 110
>gi|4503645 coagulation factor VII isoform a precursor [Homo
sapiens]
Length = 466
Score = 28.9 bits (63), Expect = 0.93
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 3 YNPGESDECRCCRNGNTRKKTVEDYFCFC 31
Y+ G+ C+NG + K ++ Y CFC
Sbjct: 104 YSDGDQCASSPCQNGGSCKDQLQSYICFC 132
>gi|33636771 myelin-associated oligodendrocyte basic protein [Homo
sapiens]
Length = 81
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 14 CRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEK 48
C++G +K ED+ C C KT K P P +K
Sbjct: 47 CKSGCFYQKKEEDWICCACQKTRLKRKIRPTPKKK 81
>gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens]
Length = 4981
Score = 27.7 bits (60), Expect = 2.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 10 ECRCCRNGNTRKKTVEDYFCFCCLKTLQKPTEV 42
EC C NG + + V+ Y+C C K E+
Sbjct: 3943 ECNPCFNGGSCQSGVDSYYCHCPFGVFGKHCEL 3975
>gi|14211837 cryptic [Homo sapiens]
Length = 223
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFC 31
+ + G S RCCRNG T V FC C
Sbjct: 78 RAFGEGASARPRCCRNGGT---CVLGSFCVC 105
>gi|4503649 coagulation factor IX preproprotein [Homo sapiens]
Length = 461
Score = 26.9 bits (58), Expect = 3.5
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFC 31
K Y G+ E C NG + K + Y C+C
Sbjct: 89 KQYVDGDQCESNPCLNGGSCKDDINSYECWC 119
>gi|22749191 tetratricopeptide repeat domain 39B [Homo sapiens]
Length = 616
Score = 26.9 bits (58), Expect = 3.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 31 CCLKTLQKPTEVPVPYEKMLQDQSAL 56
CCLK LQ+P + + Y +++ + L
Sbjct: 527 CCLKNLQRPLQAELCYNHVVESEKLL 552
>gi|193083168 ectonucleoside triphosphate diphosphohydrolase 4
isoform b [Homo sapiens]
Length = 608
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 40 TEVPVPYEKMLQDQSALIVQGLPEGV-----------AFKHPENYDLATLE 79
T++PV ++ + D A ++ G EGV F+H E+ D A +E
Sbjct: 199 TDIPVHFDFLFSDSHAEVISGKQEGVYAWIGINFVLGRFEHIEDDDEAVVE 249
>gi|4758662 ectonucleoside triphosphate diphosphohydrolase 4 isoform
a [Homo sapiens]
Length = 616
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 40 TEVPVPYEKMLQDQSALIVQGLPEGV-----------AFKHPENYDLATLE 79
T++PV ++ + D A ++ G EGV F+H E+ D A +E
Sbjct: 199 TDIPVHFDFLFSDSHAEVISGKQEGVYAWIGINFVLGRFEHIEDDDEAVVE 249
>gi|90403581 meiosis defective 1 [Homo sapiens]
Length = 1274
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 26 DYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPEN 72
++ + CL L P + P ++ L S L+ GLP+ ++ + PE+
Sbjct: 628 NFLYYMCLNLLSAPEKTGPPSKEELSAVSELLQHGLPQ-ISSRSPES 673
>gi|118600995 cripto, FRL-1, cryptic family 1B [Homo sapiens]
Length = 223
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 3 YNPGESDECRCCRNGNTRKKTVEDYFCFC 31
+ G S RCCRNG T V FC C
Sbjct: 80 FGEGASARPRCCRNGGT---CVLGSFCVC 105
>gi|228480209 four and a half LIM domains 1 isoform 3 [Homo
sapiens]
Length = 309
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQK 38
KV E +C CR+ KK V+ CCLK K
Sbjct: 26 KVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDK 63
>gi|228480205 four and a half LIM domains 1 isoform 5 [Homo
sapiens]
Length = 296
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQK 38
KV E +C CR+ KK V+ CCLK K
Sbjct: 13 KVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDK 50
>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
sapiens]
Length = 3014
Score = 26.2 bits (56), Expect = 6.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 12 RCCRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSAL 56
R C+NG T Y C C L+ K E +P+ ++ +S +
Sbjct: 1656 RRCQNGGTCVNRWNMYLCECPLRFGGKNCEQAMPHPQLFSGESVV 1700
>gi|122937283 6720455I24Rik homolog [Homo sapiens]
Length = 1413
Score = 26.2 bits (56), Expect = 6.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 14 CRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVP 45
CRNG T K+ +Y C C + + E+ P
Sbjct: 589 CRNGGTCKEAGGEYHCSCPYRFTGRHCEIGKP 620
>gi|153792780 additional sex combs like 2 [Homo sapiens]
Length = 1435
Score = 26.2 bits (56), Expect = 6.0
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 3 YNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLP 62
YN ES E + VE K + KPT P E +++ A +V P
Sbjct: 512 YNKSESQESLVTSPSKPKSPGVE--------KPIVKPTAGAGPQETNMKEPLATLVDQSP 563
Query: 63 EGVAFKHPENYDLATLEW 80
E + K + A + W
Sbjct: 564 ESLKRKSSLTQEEAPVSW 581
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,131,602
Number of Sequences: 37866
Number of extensions: 167829
Number of successful extensions: 480
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 421
Number of HSP's gapped (non-prelim): 65
length of query: 94
length of database: 18,247,518
effective HSP length: 65
effective length of query: 29
effective length of database: 15,786,228
effective search space: 457800612
effective search space used: 457800612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.