Guide to the Human Genome
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Name: LOC730036 Sequence: fasta or formatted (562aa) NCBI GI: 239750872
Description:

PREDICTED: similar to taste receptor protein 1

Not currently referenced in the text

Other entries for this name:
alt prot {664aa} PREDICTED: hypothetical protein
alt mRNA {562aa} PREDICTED: similar to taste receptor protein 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         42           2
 C cysteine            1.2          7           1
 D aspartate           1.8         10           1
 E glutamate           5.5         31           2
 F phenylalanine       3.7         21           2
 G glycine             7.8         44           2
 H histidine           2.7         15           2
 I isoleucine          4.1         23           2
 K lysine              4.1         23           1
 L leucine            13.7         77           3
 M methionine          1.4          8           1
 N asparagine          2.5         14           1
 P proline             9.3         52           2
 Q glutamine           6.6         37           2
 R arginine            5.3         30           2
 S serine              6.8         38           2
 T threonine           5.9         33           2
 V valine              6.4         36           3
 W tryptophan          2.0         11           2
 Y tyrosine            1.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to taste receptor protein 1 [Hom... 
LOC730036             1.000   PREDICTED: similar to taste receptor protein 1 [Hom...
LOC730036             0.722   PREDICTED: hypothetical protein 
IMPG2                 0.021   interphotoreceptor matrix proteoglycan 2 
MUC1                  0.013   mucin 1 isoform 1 precursor 
IMPG1                 0.013   interphotoreceptor matrix proteoglycan 1 
MUC1                  0.013   mucin 1 isoform 3 precursor 
MUC1                  0.013   mucin 1 isoform 2 precursor 
BAT2                  0.013   HLA-B associated transcript-2 
MUC16                 0.010   mucin 16 
LOC100293231          0.010   PREDICTED: hypothetical protein, partial 
LOC100294390          0.010   PREDICTED: similar to hCG2041351 
WASF1                 0.008   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.008   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.008   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.008   Wiskott-Aldrich syndrome protein family member 1 [Hom...
FBXL19                0.008   F-box and leucine-rich repeat protein 19 
ADAM15                0.007   a disintegrin and metalloproteinase domain 15 isofor...
GPR110                0.007   G-protein coupled receptor 110 isoform 1 
BRD4                  0.007   bromodomain-containing protein 4 isoform long 
KAT2A                 0.007   general control of amino acid synthesis 5-like 2 [H...
CHD7                  0.007   chromodomain helicase DNA binding protein 7 
UTF1                  0.006   undifferentiated embryonic cell transcription factor...
FGFRL1                0.006   fibroblast growth factor receptor-like 1 precursor [...
FGFRL1                0.006   fibroblast growth factor receptor-like 1 precursor [...
FGFRL1                0.006   fibroblast growth factor receptor-like 1 precursor [...
PDCD6IP               0.006   programmed cell death 6 interacting protein isoform...
PDCD6IP               0.006   programmed cell death 6 interacting protein isoform ...
LOC100292688          0.005   PREDICTED: hypothetical protein 
PAX8                  0.005   paired box 8 isoform PAX8C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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