Guide to the Human Genome
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Name: NUF2 Sequence: fasta or formatted (464aa) NCBI GI: 117968420
Description:

NUF2, NDC80 kinetochore complex component

Referenced in:

Additional Cell Cycle Functions
Spindle, M phase, and Meiosis

Other entries for this name:
alt mRNA [464aa] NUF2, NDC80 kinetochore complex component
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         22           2
 C cysteine            1.3          6           1
 D aspartate           5.0         23           1
 E glutamate          10.8         50           2
 F phenylalanine       3.4         16           1
 G glycine             2.4         11           1
 H histidine           2.2         10           1
 I isoleucine          6.7         31           2
 K lysine             12.5         58           2
 L leucine            10.6         49           1
 M methionine          3.0         14           2
 N asparagine          5.0         23           1
 P proline             2.6         12           1
 Q glutamine           6.5         30           2
 R arginine            4.1         19           1
 S serine              6.2         29           2
 T threonine           4.1         19           2
 V valine              5.4         25           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NUF2, NDC80 kinetochore complex component 
NUF2                  1.000   NUF2, NDC80 kinetochore complex component 
CENPE                 0.047   centromere protein E 
CENPF                 0.047   centromere protein F 
GOLGA4                0.045   golgi autoantigen, golgin subfamily a, 4 
CCDC88A               0.044   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.044   coiled-coil domain containing 88A isoform 1 
CDC42BPA              0.044   CDC42-binding protein kinase alpha isoform B 
UACA                  0.044   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.044   uveal autoantigen with coiled-coil domains and ankyr...
LOC400352             0.043   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.043   PREDICTED: similar to Putative golgin subfamily A m...
C10orf118             0.042   CTCL tumor antigen L14-2 
CLIP1                 0.041   restin isoform b 
CLIP1                 0.041   restin isoform a 
HOOK3                 0.041   golgi-associated microtubule-binding protein HOOK3 [...
AKAP9                 0.041   A-kinase anchor protein 9 isoform 3 
FILIP1                0.041   filamin A interacting protein 1 
GCC2                  0.040   GRIP and coiled-coil domain-containing 2 
EEA1                  0.040   early endosome antigen 1, 162kD 
RAI14                 0.040   retinoic acid induced 14 isoform d 
RAI14                 0.040   retinoic acid induced 14 isoform c 
RAI14                 0.040   retinoic acid induced 14 isoform b 
RAI14                 0.040   retinoic acid induced 14 isoform a 
RAI14                 0.040   retinoic acid induced 14 isoform a 
RAI14                 0.040   retinoic acid induced 14 isoform a 
DSP                   0.040   desmoplakin isoform I 
LOC440243             0.040   PREDICTED: Putative golgin subfamily A member 6-lik...
AKAP9                 0.040   A-kinase anchor protein 9 isoform 2 
HMMR                  0.038   hyaluronan-mediated motility receptor isoform d [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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