Guide to the Human Genome
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Name: PLA2G4A Sequence: fasta or formatted (749aa) NCBI GI: 23943920
Description:

cytosolic phospholipase A2, group IVA

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         35           2
 C cysteine            1.2          9           1
 D aspartate           6.5         49           3
 E glutamate           7.9         59           3
 F phenylalanine       6.8         51           2
 G glycine             4.9         37           3
 H histidine           2.5         19           1
 I isoleucine          4.7         35           2
 K lysine              6.7         50           3
 L leucine             8.5         64           4
 M methionine          3.7         28           1
 N asparagine          5.1         38           2
 P proline             6.1         46           2
 Q glutamine           2.4         18           2
 R arginine            4.0         30           2
 S serine              8.4         63           2
 T threonine           5.3         40           2
 V valine              6.7         50           3
 W tryptophan          0.9          7           1
 Y tyrosine            2.8         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytosolic phospholipase A2, group IVA 
PLA2G4F               0.184   phospholipase A2, group IVF 
PLA2G4E               0.178   phospholipase A2, group 4E 
PLA2G4D               0.154   phospholipase A2, group IVD 
PLA2G4B               0.144   phospholipase A2, group IVB 
JMJD7-PLA2G4B         0.144   JMJD7-PLA2G4B protein 
PLA2G4C               0.095   phospholipase A2, group IVC isoform 3 
PLA2G4C               0.095   phospholipase A2, group IVC isoform 2 precursor [Ho...
PLA2G4C               0.095   phospholipase A2, group IVC isoform 1 precursor [Ho...
MYOF                  0.016   myoferlin isoform b 
MYOF                  0.016   myoferlin isoform a 
ESYT3                 0.013   family with sequence similarity 62 (C2 domain conta...
RPH3A                 0.013   rabphilin 3A homolog isoform 1 
RPH3A                 0.013   rabphilin 3A homolog isoform 2 
PLCL2                 0.013   phospholipase C-like 2 isoform 1 
PLCL2                 0.013   phospholipase C-like 2 isoform 2 
PLCL1                 0.012   phospholipase C-like 1 isoform a 
PLCL1                 0.012   phospholipase C-like 1 isoform b 
PRKCA                 0.011   protein kinase C, alpha 
PRKCG                 0.011   protein kinase C, gamma 
NEDD4L                0.011   neural precursor cell expressed, developmentally dow...
NEDD4L                0.011   neural precursor cell expressed, developmentally do...
NEDD4L                0.011   neural precursor cell expressed, developmentally do...
NEDD4L                0.011   neural precursor cell expressed, developmentally do...
PRKCB                 0.011   protein kinase C, beta isoform 1 
PRKCB                 0.011   protein kinase C, beta isoform 2 
SYT10                 0.010   synaptotagmin X 
SYT2                  0.009   synaptotagmin II 
SYT2                  0.009   synaptotagmin II 
SYT4                  0.009   synaptotagmin IV 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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