Guide to the Human Genome
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Name: HSDL1 Sequence: fasta or formatted (275aa) NCBI GI: 226371733
Description:

hydroxysteroid dehydrogenase like 1 isoform b

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Steroid Hormones

Other entries for this name:
alt prot [330aa] hydroxysteroid dehydrogenase like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         31           3
 C cysteine            2.5          7           2
 D aspartate           2.5          7           1
 E glutamate           4.0         11           2
 F phenylalanine       4.0         11           1
 G glycine             5.1         14           1
 H histidine           2.5          7           2
 I isoleucine          7.3         20           2
 K lysine              4.7         13           2
 L leucine            10.2         28           2
 M methionine          2.2          6           1
 N asparagine          2.9          8           1
 P proline             3.3          9           1
 Q glutamine           2.9          8           1
 R arginine            5.5         15           1
 S serine             10.2         28           2
 T threonine           4.4         12           2
 V valine              6.2         17           2
 W tryptophan          2.9          8           1
 Y tyrosine            5.5         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hydroxysteroid dehydrogenase like 1 isoform b [Homo... 
HSDL1                 0.885   hydroxysteroid dehydrogenase like 1 isoform a [Homo...
HSD17B12              0.242   hydroxysteroid (17-beta) dehydrogenase 12 
HSD17B3               0.135   estradiol 17 beta-dehydrogenase 3 
DHRS2                 0.066   dehydrogenase/reductase member 2 isoform 2 
DHRS2                 0.060   dehydrogenase/reductase member 2 isoform 1 
DHRS4                 0.056   peroxisomal short-chain alcohol dehydrogenase 
DHRS4L1               0.045   dehydrogenase/reductase (SDR family) member 4 like ...
DHRS4L2               0.045   dehydrogenase/reductase (SDR family) member 4 like ...
HSD17B13              0.043   hydroxysteroid (17-beta) dehydrogenase 13 isoform B...
DHRS7                 0.039   dehydrogenase/reductase (SDR family) member 7 
BDH2                  0.039   3-hydroxybutyrate dehydrogenase, type 2 
HSD11B1               0.038   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.038   11-beta-hydroxysteroid dehydrogenase 1 
CBR4                  0.036   carbonic reductase 4 
DHRS13                0.036   dehydrogenase/reductase (SDR family) member 13 [Hom...
RDH13                 0.028   retinol dehydrogenase 13 isoform 1 
DCXR                  0.028   dicarbonyl/L-xylulose reductase 
RDH8                  0.028   retinol dehydrogenase 8 (all-trans) 
BDH1                  0.026   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.026   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.026   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
DHRSX                 0.026   dehydrogenase/reductase (SDR family) X-linked [Homo...
HSD17B13              0.026   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
DHRS7B                0.026   dehydrogenase/reductase (SDR family) member 7B [Homo...
HSD17B2               0.024   hydroxysteroid (17-beta) dehydrogenase 2 
PECR                  0.024   peroxisomal trans-2-enoyl-CoA reductase 
RDH11                 0.024   retinol dehydrogenase 11 
HSD17B8               0.024   estradiol 17 beta-dehydrogenase 8 
KDSR                  0.023   3-ketodihydrosphingosine reductase precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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