Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MTMR7 Sequence: fasta or formatted (660aa) NCBI GI: 225543474
Description:

myotubularin related protein 7

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         35           2
 C cysteine            2.6         17           1
 D aspartate           5.9         39           1
 E glutamate           7.6         50           3
 F phenylalanine       4.4         29           1
 G glycine             4.5         30           2
 H histidine           3.2         21           2
 I isoleucine          5.6         37           2
 K lysine              5.8         38           2
 L leucine             8.6         57           3
 M methionine          2.4         16           1
 N asparagine          4.7         31           1
 P proline             4.7         31           1
 Q glutamine           5.0         33           2
 R arginine            5.8         38           3
 S serine              9.5         63           2
 T threonine           4.1         27           2
 V valine              5.0         33           2
 W tryptophan          1.7         11           1
 Y tyrosine            3.6         24           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 7 
MTMR6                 0.532   myotubularin related protein 6 
MTMR8                 0.520   myotubularin related protein 8 
MTMR2                 0.249   myotubularin-related protein 2 isoform 1 
MTMR2                 0.249   myotubularin-related protein 2 isoform 2 
MTMR2                 0.249   myotubularin-related protein 2 isoform 2 
MTM1                  0.241   myotubularin 
MTMR9                 0.238   myotubularin related protein 9 
MTMR1                 0.228   myotubularin-related protein 1 
MTMR4                 0.195   myotubularin related protein 4 
MTMR3                 0.192   myotubularin-related protein 3 isoform b 
MTMR3                 0.192   myotubularin-related protein 3 isoform a 
MTMR3                 0.192   myotubularin-related protein 3 isoform c 
SBF1                  0.086   SET binding factor 1 
SBF2                  0.080   SET binding factor 2 
MTMR10                0.068   myotubularin related protein 10 
MTMR12                0.062   myotubularin related protein 12 
MTMR11                0.052   myotubularin related protein 11 isoform a 
MTMR11                0.052   myotubularin related protein 11 isoform b 
LOC649330             0.014   PREDICTED: heterogeneous nuclear ribonucleoprotein ...
LOC652665             0.014   PREDICTED: similar to heterogeneous nuclear ribonuc...
LOC649330             0.014   heterogeneous nuclear ribonucleoprotein C-like [Hom...
HNRNPC                0.012   heterogeneous nuclear ribonucleoprotein C isoform b...
HNRNPC                0.012   heterogeneous nuclear ribonucleoprotein C isoform a...
HNRNPC                0.012   heterogeneous nuclear ribonucleoprotein C isoform b...
HNRNPC                0.012   heterogeneous nuclear ribonucleoprotein C isoform a...
LOC440563             0.011   heterogeneous nuclear ribonucleoprotein C-like [Hom...
DSPP                  0.011   dentin sialophosphoprotein preproprotein 
TCEB3CL               0.010   transcription elongation factor B polypeptide 3C-li...
TCEB3C                0.010   transcription elongation factor B polypeptide 3C [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press