Guide to the Human Genome
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Name: LOC441869 Sequence: fasta or formatted (399aa) NCBI GI: 223634006
Description:

hypothetical protein LOC441869

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.0         72           4
 C cysteine            0.5          2           1
 D aspartate           4.0         16           1
 E glutamate           8.0         32           6
 F phenylalanine       0.3          1           1
 G glycine            13.5         54           3
 H histidine           4.8         19           2
 I isoleucine          0.8          3           1
 K lysine              0.5          2           1
 L leucine            15.3         61           3
 M methionine          0.8          3           1
 N asparagine          0.0          0           0
 P proline             4.8         19           1
 Q glutamine           3.8         15           1
 R arginine            9.3         37           1
 S serine              3.3         13           1
 T threonine           4.8         19           1
 V valine              5.5         22           2
 W tryptophan          2.3          9           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC441869 
ANK2                  0.192   ankyrin 2 isoform 3 
ANK2                  0.192   ankyrin 2 isoform 2 
ANK2                  0.192   ankyrin 2 isoform 1 
ANKRD50               0.190   ankyrin repeat domain 50 
ANK3                  0.183   ankyrin 3 isoform 1 
ANK1                  0.175   ankyrin 1 isoform 9 
ANK1                  0.175   ankyrin 1 isoform 1 
ANK1                  0.175   ankyrin 1 isoform 3 
ANK1                  0.175   ankyrin 1 isoform 2 
ANK1                  0.175   ankyrin 1 isoform 4 
ANKRD44               0.170   ankyrin repeat domain 44 
ANKRD52               0.170   ankyrin repeat domain 52 
ANKRD28               0.168   ankyrin repeat domain 28 
ANKK1                 0.155   ankyrin repeat and kinase domain containing 1 
ANKRD17               0.152   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.152   ankyrin repeat domain protein 17 isoform b 
RIPK4                 0.152   ankyrin repeat domain 3 
TNKS                  0.149   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS2                 0.149   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKDD1A               0.145   ankyrin repeat and death domain containing 1A 
ANKHD1                0.143   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.143   ANKHD1-EIF4EBP3 protein 
TANC2                 0.140   tetratricopeptide repeat, ankyrin repeat and coiled...
KIDINS220             0.135   kinase D-interacting substrate of 220 kDa 
TANC1                 0.131   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.131   tetratricopeptide repeat, ankyrin repeat and coiled...
INVS                  0.129   inversin isoform a 
INVS                  0.129   inversin isoform b 
DAPK1                 0.118   death-associated protein kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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