Guide to the Human Genome
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Name: SLC23A3 Sequence: fasta or formatted (610aa) NCBI GI: 222080105
Description:

solute carrier family 23 (nucleobase transporters), member 3 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [493aa] solute carrier family 23 (nucleobase transporters), member 3 isof...
alt prot [618aa] solute carrier family 23 (nucleobase transporters), member 3 isof...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         44           2
 C cysteine            3.6         22           1
 D aspartate           1.3          8           1
 E glutamate           3.3         20           2
 F phenylalanine       3.8         23           2
 G glycine             9.3         57           2
 H histidine           3.1         19           1
 I isoleucine          3.1         19           1
 K lysine              1.0          6           1
 L leucine            17.2        105           4
 M methionine          2.1         13           2
 N asparagine          1.5          9           1
 P proline            10.5         64           5
 Q glutamine           4.8         29           2
 R arginine            3.6         22           2
 S serine             11.3         69           2
 T threonine           3.6         22           2
 V valine              6.9         42           3
 W tryptophan          2.1         13           1
 Y tyrosine            0.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 23 (nucleobase transporters),... 
SLC23A3               0.993   solute carrier family 23 (nucleobase transporters),...
SLC23A3               0.358   solute carrier family 23 (nucleobase transporters),...
SLC23A1               0.213   solute carrier family 23 (nucleobase transporters), ...
SLC23A1               0.209   solute carrier family 23 (nucleobase transporters), ...
SLC23A2               0.208   solute carrier family 23 (nucleobase transporters), ...
SLC23A2               0.208   solute carrier family 23 (nucleobase transporters), ...
LOC100129214          0.008   PREDICTED: hypothetical protein 
LOC100129214          0.008   PREDICTED: hypothetical protein 
LOC100129214          0.008   PREDICTED: hypothetical protein 
HCN4                  0.007   hyperpolarization activated cyclic nucleotide-gated p...
POU2F3                0.007   POU transcription factor 
PTPN5                 0.007   protein-tyrosine-phosphatase non-receptor 5 isoform ...
PTPN5                 0.007   protein-tyrosine-phosphatase non-receptor 5 isoform ...
SEMA4G                0.007   semaphorin 4G 
ZNF142                0.007   zinc finger protein 142 
MAP6                  0.007   microtubule-associated protein 6 isoform 1 
ERI3                  0.007   prion protein interacting protein 
TIGD5                 0.006   tigger transposable element derived 5 
OR1M1                 0.006   olfactory receptor, family 1, subfamily M, member 1 ...
RASSF1                0.005   Ras association domain family 1 isoform D 
RASSF1                0.005   Ras association domain family 1 isoform A 
STK36                 0.005   serine/threonine kinase 36 
TSPYL2                0.005   TSPY-like 2 
TMEM198               0.005   transmembrane protein 198 
LOC388553             0.005   PREDICTED: similar to hCG1645909 
LOC388553             0.005   PREDICTED: similar to hCG1645909 
LOC388553             0.005   PREDICTED: similar to hCG1645909 
SLCO1A2               0.005   organic anion transporting polypeptide A 
SLCO1A2               0.005   organic anion transporting polypeptide A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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