Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 115298686

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|115298686 protein inhibitor of activated STAT, 3 [Homo
sapiens]
         (628 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens]   1284   0.0  
gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens]      691   0.0  
gi|56699458 protein inhibitor of activated STAT X isoform beta [...   632   0.0  
gi|27532984 protein inhibitor of activated STAT X isoform alpha ...   619   e-177
gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens]     433   e-121
gi|31543543 retinoic acid induced 17 [Homo sapiens]                    95   2e-19
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s...    82   2e-15
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s...    81   3e-15
gi|4507493 thrombopoietin precursor [Homo sapiens]                     39   0.011
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo...    37   0.042
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    37   0.055
gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]              37   0.055
gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens]              37   0.055
gi|4507691 transformation/transcription domain-associated protei...    37   0.072
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]         37   0.072
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...    35   0.16 
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...    35   0.16 
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...    35   0.16 
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r...    35   0.16 
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r...    35   0.16 
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r...    35   0.16 
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re...    35   0.16 
gi|21040334 B-cell CLL/lymphoma 11B isoform 1 [Homo sapiens]           35   0.16 
gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]      35   0.16 
gi|146134388 YLP motif containing 1 [Homo sapiens]                     35   0.16 
gi|153792074 proline rich 12 [Homo sapiens]                            35   0.16 
gi|12597625 activating transcription factor 5 [Homo sapiens]           35   0.21 
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]                35   0.21 
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...    35   0.27 
gi|210032580 SET domain containing 1B [Homo sapiens]                   35   0.27 

>gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens]
          Length = 628

 Score = 1284 bits (3323), Expect = 0.0
 Identities = 628/628 (100%), Positives = 628/628 (100%)

Query: 1   MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
           MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL
Sbjct: 1   MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60

Query: 61  YRRRFPRKTLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLP 120
           YRRRFPRKTLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLP
Sbjct: 61  YRRRFPRKTLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLP 120

Query: 121 QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLP 180
           QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLP
Sbjct: 121 QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLP 180

Query: 181 GAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSR 240
           GAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSR
Sbjct: 181 GAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSR 240

Query: 241 PINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHS 300
           PINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHS
Sbjct: 241 PINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHS 300

Query: 301 RALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEK 360
           RALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEK
Sbjct: 301 RALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEK 360

Query: 361 KPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCPMKPKKEASEVCPP 420
           KPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCPMKPKKEASEVCPP
Sbjct: 361 KPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCPMKPKKEASEVCPP 420

Query: 421 PGYGLDGLQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLPPTKKHCSVTSAAIPALPG 480
           PGYGLDGLQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLPPTKKHCSVTSAAIPALPG
Sbjct: 421 PGYGLDGLQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLPPTKKHCSVTSAAIPALPG 480

Query: 481 SKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGLDLFSFLQTESQ 540
           SKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGLDLFSFLQTESQ
Sbjct: 481 SKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGLDLFSFLQTESQ 540

Query: 541 HYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPPPGRVSSIVAPG 600
           HYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPPPGRVSSIVAPG
Sbjct: 541 HYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPPPGRVSSIVAPG 600

Query: 601 GALREGHGGPLPSGPSLTGCRSDIISLD 628
           GALREGHGGPLPSGPSLTGCRSDIISLD
Sbjct: 601 GALREGHGGPLPSGPSLTGCRSDIISLD 628


>gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens]
          Length = 651

 Score =  691 bits (1784), Expect = 0.0
 Identities = 383/662 (57%), Positives = 466/662 (70%), Gaps = 45/662 (6%)

Query: 1   MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
           MA+  ELK MVMS RVSELQVLLG+AGRNK GRKHELL KALHLLK+ C+P+VQMKIKEL
Sbjct: 1   MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKEL 60

Query: 61  YRRRFPRKTLGPSDLSL---------LSLPPGTSP-VGSPGPLAPIPPTLLAPGTLLGPK 110
           YRRRFP+K + P+DLS+          +L P T P +   G  A  P   L P +LLGPK
Sbjct: 61  YRRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSP---LLPVSLLGPK 117

Query: 111 REVDMHPPLPQ---PVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQ 167
            E+++ P L     PVHPD+ ++ LPFY++  ELI+PT+LAS +SQRF E  F FALTPQ
Sbjct: 118 HELEL-PHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFAFALTPQ 176

Query: 168 QVQQILTSREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLP 227
           QVQQI +S ++  G KCD+T+QVQLRFCL ETSCPQED+FPPNL VKVN K C LPGYLP
Sbjct: 177 QVQQISSSMDI-SGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLP 235

Query: 228 PTKNGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQ 287
           PTKNG EPKRPSRPINIT L RLS TVPNTIVV+W++E GRNYS++VYLV+QL++  LLQ
Sbjct: 236 PTKNGVEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQ 295

Query: 288 KLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQ 347
           +LRAKGIRNPDHSRALIKEKLTADPDSE+ATTSLRVSL+CPLGKMRLT+PCRALTC+HLQ
Sbjct: 296 RLRAKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQ 355

Query: 348 SFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCP 407
            FDA LY+QMNEKKPTW CPVCDKKAPYE LIIDGLFMEIL  C+DCDEIQF EDG+W P
Sbjct: 356 CFDATLYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKEDGTWAP 415

Query: 408 MKPKKEASEVCPPPGYGLDG-----LQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLP 462
           M+ KKE  EV      G+DG     L++        S   KKVEVIDLTI+SSSDEE+  
Sbjct: 416 MRSKKEVQEVSASYN-GVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSSDEEEEE 474

Query: 463 PT-KKHCSVTSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAF- 520
           P+ K+ C   S   P    +KG+L+  HQ S V R+P++  +   ++++  + +Y   F 
Sbjct: 475 PSAKRTCPSLSPTSPL--NNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYRHPFH 532

Query: 521 --PLGADIQGLDLFSFLQTESQHYGPSVITSL-----DEQDAL--GHFFQYRGTPSHFLG 571
             P+  D+QGLD F FL  ++QHY  S++ +      D+QD L    FF Y  +   FL 
Sbjct: 533 MTPMPYDLQGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSS-QMFLD 591

Query: 572 PLAPTLGSSHCSATPAPPPGRVSSIVAPGGALREGHGGPLPS-----GPSLTGCRSDIIS 626
            L+   GS+    T     G  SS+V+   +LRE H   + +       S+ G   DIIS
Sbjct: 592 QLSAG-GSTSLPTTNGSSSGSNSSLVS-SNSLRESHSHTVTNRSSTDTASIFGIIPDIIS 649

Query: 627 LD 628
           LD
Sbjct: 650 LD 651


>gi|56699458 protein inhibitor of activated STAT X isoform beta
           [Homo sapiens]
          Length = 621

 Score =  632 bits (1630), Expect = 0.0
 Identities = 343/579 (59%), Positives = 416/579 (71%), Gaps = 36/579 (6%)

Query: 1   MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
           MA+  EL++MV SFRVSELQVLLGFAGRNKSGRKH+LL +ALHLLKS C+P+VQ+KI+EL
Sbjct: 1   MADFEELRNMVSSFRVSELQVLLGFAGRNKSGRKHDLLMRALHLLKSGCSPAVQIKIREL 60

Query: 61  YRRRFPRKTLGPSDLSLL-----SLPPGTSPVGSPGPLAPI---PPTLLAPGTLLGPKRE 112
           YRRR+PR   G SDLS +     SL  G+SPV     +A I   P T + P +   P   
Sbjct: 61  YRRRYPRTLEGLSDLSTIKSSVFSLDGGSSPVEPDLAVAGIHSLPSTSVTPHSPSSPVGS 120

Query: 113 VDMH------------PPLPQPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHF 160
           V +             PP+P PVHPDV +K LPFY+V   LI+PT+L  +S QRF+E  F
Sbjct: 121 VLLQDTKPTFEMQQPSPPIP-PVHPDVQLKNLPFYDVLDVLIKPTSLVQSSIQRFQEKFF 179

Query: 161 TFALTPQQVQQILTSREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLC 220
            FALTPQQV++I  SR+ LPG + DYT+QVQLR CL ETSCPQED +P +L +KVNGKL 
Sbjct: 180 IFALTPQQVREICISRDFLPGGRRDYTVQVQLRLCLAETSCPQEDNYPNSLCIKVNGKLF 239

Query: 221 PLPGYLPPTKNGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQL 280
           PLPGY PP KNG E KRP RP+NIT L RLS+ VPN I ++W+SE G+NYS+SVYLVRQL
Sbjct: 240 PLPGYAPPPKNGIEQKRPGRPLNITSLVRLSSAVPNQISISWASEIGKNYSMSVYLVRQL 299

Query: 281 TAGTLLQKLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRA 340
           T+  LLQ+L+ KGIRNPDHSRALIKEKLTADPDSE+ATTSLRVSLMCPLGKMRLT+PCRA
Sbjct: 300 TSAMLLQRLKMKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLMCPLGKMRLTIPCRA 359

Query: 341 LTCAHLQSFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFM 400
           +TC HLQ FDAALYLQMNEKKPTW CPVCDKKA YESLI+DGLFMEIL+ CSD DEI+F 
Sbjct: 360 VTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEILNDCSDVDEIKFQ 419

Query: 401 EDGSWCPMKPKKEASEVCPPPGYGLD--GLQYSPVQGGDPSE-NKKKVEVIDLTIESSSD 457
           EDGSWCPM+PKKEA +V   P   ++   +   P      SE +KKKV+VIDLTIESSSD
Sbjct: 420 EDGSWCPMRPKKEAMKVSSQPCTKIESSSVLSKPCSVTVASEASKKKVDVIDLTIESSSD 479

Query: 458 EEDLPPTKKHCSVTSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLS------SL 511
           EE+ PP K+ C   S    +   +KGVL   +QPSSV R P++ ++    +       S+
Sbjct: 480 EEEDPPAKRKCIFMSETQSS--PTKGVLM--YQPSSV-RVPSVTSVDPAAIPPSLTDYSV 534

Query: 512 PLHEYPPAFPLGADIQGLDLFSFLQTESQHYGPSVITSL 550
           P H + P   + +D+ GLD  S +  + Q+  P  + SL
Sbjct: 535 PFH-HTPISSMSSDLPGLDFLSLIPVDPQYCPPMFLDSL 572


>gi|27532984 protein inhibitor of activated STAT X isoform alpha
           [Homo sapiens]
          Length = 572

 Score =  619 bits (1597), Expect = e-177
 Identities = 336/557 (60%), Positives = 405/557 (72%), Gaps = 36/557 (6%)

Query: 1   MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
           MA+  EL++MV SFRVSELQVLLGFAGRNKSGRKH+LL +ALHLLKS C+P+VQ+KI+EL
Sbjct: 1   MADFEELRNMVSSFRVSELQVLLGFAGRNKSGRKHDLLMRALHLLKSGCSPAVQIKIREL 60

Query: 61  YRRRFPRKTLGPSDLSLL-----SLPPGTSPVGSPGPLAPI---PPTLLAPGTLLGPKRE 112
           YRRR+PR   G SDLS +     SL  G+SPV     +A I   P T + P +   P   
Sbjct: 61  YRRRYPRTLEGLSDLSTIKSSVFSLDGGSSPVEPDLAVAGIHSLPSTSVTPHSPSSPVGS 120

Query: 113 VDMH------------PPLPQPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHF 160
           V +             PP+P PVHPDV +K LPFY+V   LI+PT+L  +S QRF+E  F
Sbjct: 121 VLLQDTKPTFEMQQPSPPIP-PVHPDVQLKNLPFYDVLDVLIKPTSLVQSSIQRFQEKFF 179

Query: 161 TFALTPQQVQQILTSREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLC 220
            FALTPQQV++I  SR+ LPG + DYT+QVQLR CL ETSCPQED +P +L +KVNGKL 
Sbjct: 180 IFALTPQQVREICISRDFLPGGRRDYTVQVQLRLCLAETSCPQEDNYPNSLCIKVNGKLF 239

Query: 221 PLPGYLPPTKNGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQL 280
           PLPGY PP KNG E KRP RP+NIT L RLS+ VPN I ++W+SE G+NYS+SVYLVRQL
Sbjct: 240 PLPGYAPPPKNGIEQKRPGRPLNITSLVRLSSAVPNQISISWASEIGKNYSMSVYLVRQL 299

Query: 281 TAGTLLQKLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRA 340
           T+  LLQ+L+ KGIRNPDHSRALIKEKLTADPDSE+ATTSLRVSLMCPLGKMRLT+PCRA
Sbjct: 300 TSAMLLQRLKMKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLMCPLGKMRLTIPCRA 359

Query: 341 LTCAHLQSFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFM 400
           +TC HLQ FDAALYLQMNEKKPTW CPVCDKKA YESLI+DGLFMEIL+ CSD DEI+F 
Sbjct: 360 VTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEILNDCSDVDEIKFQ 419

Query: 401 EDGSWCPMKPKKEASEVCPPPGYGLD--GLQYSPVQGGDPSE-NKKKVEVIDLTIESSSD 457
           EDGSWCPM+PKKEA +V   P   ++   +   P      SE +KKKV+VIDLTIESSSD
Sbjct: 420 EDGSWCPMRPKKEAMKVSSQPCTKIESSSVLSKPCSVTVASEASKKKVDVIDLTIESSSD 479

Query: 458 EEDLPPTKKHCSVTSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLS------SL 511
           EE+ PP K+ C   S    +   +KGVL   +QPSSV R P++ ++    +       S+
Sbjct: 480 EEEDPPAKRKCIFMSETQSS--PTKGVLM--YQPSSV-RVPSVTSVDPAAIPPSLTDYSV 534

Query: 512 PLHEYPPAFPLGADIQG 528
           P H + P   + +D+ G
Sbjct: 535 PFH-HTPISSMSSDLPG 550


>gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens]
          Length = 510

 Score =  433 bits (1113), Expect = e-121
 Identities = 243/515 (47%), Positives = 322/515 (62%), Gaps = 47/515 (9%)

Query: 2   AELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKELY 61
           AEL E K+MVMSFRVS+LQ+LLGF GR+KSG KHEL+ +AL L++  C+P +  KIKELY
Sbjct: 3   AELVEAKNMVMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFDCSPELFKKIKELY 62

Query: 62  RRRFPRKTLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPK---REVDMHPP 118
             R+ +K   P+      L P T    +      +P T LA   +  P    + ++    
Sbjct: 63  ETRYAKKNSEPAPQPHRPLDPLTMH-STYDRAGAVPRTPLAGPNIDYPVLYGKYLNGLGR 121

Query: 119 LP-QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSRE 177
           LP + + P+V +  LPF+ +  EL++PT L   ++++ +E+   FALTP+QV+ I  SRE
Sbjct: 122 LPAKTLKPEVRLVKLPFFNMLDELLKPTELVPQNNEKLQESPCIFALTPRQVELIRNSRE 181

Query: 178 VLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKR 237
           + PG K    +QV LR C  +TSCPQED +PPN+ VKVN   C +PGY P  K G EPKR
Sbjct: 182 LQPGVKA---VQVVLRICYSDTSCPQEDQYPPNIAVKVNHSYCSVPGYYPSNKPGVEPKR 238

Query: 238 PSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNP 297
           P RPIN+T L  LS+   N I V W + +G++YS+++YLVRQLT+  LLQ+L+  G+++P
Sbjct: 239 PCRPINLTHLMYLSSAT-NRITVTWGN-YGKSYSVALYLVRQLTSSELLQRLKTIGVKHP 296

Query: 298 DHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQM 357
           +  +AL+KEKL  DPDSE+ATT +RVSL+CPL KMRL+VPCRA TCAHLQ FDA  YLQM
Sbjct: 297 ELCKALVKEKLRLDPDSEIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQM 356

Query: 358 NEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCPMKPKKEASEV 417
           NEKKPTW CPVCDK APY+ LIIDGL  +ILS C D DEI+++ DGSWCP++ +KE S  
Sbjct: 357 NEKKPTWMCPVCDKPAPYDQLIIDGLLSKILSECEDADEIEYLVDGSWCPIRAEKERS-- 414

Query: 418 CPPPGYGL-------DGLQYSP----------VQGGDP----SENKKKVEVIDLTIESSS 456
           C P G  L       +GL  +P            GG P       K   +V+DLT++SSS
Sbjct: 415 CSPQGAILVLGPSDANGLLPAPSVNGSGALGSTGGGGPVGSMENGKPGADVVDLTLDSSS 474

Query: 457 DEEDL--------------PPTKKHCSVTSAAIPA 477
             ED               P  K+ C      +PA
Sbjct: 475 SSEDEEEEEEEEEDEDEEGPRPKRRCPFQKGLVPA 509


>gi|31543543 retinoic acid induced 17 [Homo sapiens]
          Length = 1067

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 126/542 (23%), Positives = 201/542 (37%), Gaps = 81/542 (14%)

Query: 81  PPGTSPVG----SPGPLAPIPPTLLAPGTLLGP--KREVDMHPPLPQPVHPDVTMKPLP- 133
           PP   PV     SP P  P PP  + PG+ + P      D+ PP P  + P+++  P P 
Sbjct: 498 PPRPVPVANYPHSPVPGNPTPP--MTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPP 555

Query: 134 ----------FYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLPGAK 183
                     F    G ++ P  L          ++  F L P   Q ++   ++    K
Sbjct: 556 ANHNDELRLTFPVRDGVVLEPFRL----EHNLAVSNHVFHLRPTVHQTLMWRSDLELQFK 611

Query: 184 CDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSRPIN 243
           C +    Q+              +P ++ V VN          P T    + K   +P++
Sbjct: 612 CYHHEDRQMN-----------TNWPASVQVSVNAT--------PLTIERGDNKTSHKPLH 652

Query: 244 ITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHSRAL 303
           +  + +      NTI +  ++    ++   + LV + +  ++LQ L  K +   +H    
Sbjct: 653 LKHVCQPGR---NTIQITVTA-CCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITK 708

Query: 304 IKEKL----------TADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAAL 353
           IK             T + +  V  T+++VSL CP+   R+ +P R   C H+Q FD   
Sbjct: 709 IKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLES 768

Query: 354 YLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSC--SDCDEIQFMEDGSWCPMKPK 411
           YLQ+N ++ TW CPVC+K A  E L +D     IL++   S+ +E+      SW P+  K
Sbjct: 769 YLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIK 828

Query: 412 KEASEVCPPPGYGLDGLQYSPVQGGDPSEN-KKKVEVIDLTIESSSDEEDLPPTKKHCSV 470
            +      P     DG+     +   PS+     V  +   +        LPP     + 
Sbjct: 829 SDLHIKDDP-----DGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNS 883

Query: 471 TSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGLD 530
              +      S+G    GH           GT   DF+   P   +PP  P         
Sbjct: 884 NDYS------SQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKP 937

Query: 531 LFSFLQTESQHYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPPP 590
           L   +Q    H G S       Q  L           H   P + +    H S  P PPP
Sbjct: 938 LSHPMQETMPHAGSSDQPHPSIQQGL-----------HVPHPSSQSGPPLHHSGAPPPPP 986

Query: 591 GR 592
            +
Sbjct: 987 SQ 988


>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
           sapiens]
          Length = 920

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 97/361 (26%), Positives = 149/361 (41%), Gaps = 51/361 (14%)

Query: 103 PGTLLGPKREVDMHPPLPQPVHPDVTMKP---LPFYEVYGELIRP---------TTLAST 150
           PG L GP R +  +P  P P +P   M P   +P+     E+  P          +L S+
Sbjct: 353 PG-LSGPTRSIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSLHSS 411

Query: 151 SSQR--FEEAHFTF------ALTPQQVQQILT-SREVLPGAKCDYTIQV-----QLRF-C 195
            S     +E   TF       L P ++Q  L  S  V       Y   +     +L+F C
Sbjct: 412 PSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKC 471

Query: 196 LCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSRPINITPLARLSATVP 255
                      +P ++ V VN          P T    + K   +P+ +  + +      
Sbjct: 472 YHHEDRQMNTNWPASVQVSVNAT--------PLTIERGDNKTSHKPLYLKHVCQPGR--- 520

Query: 256 NTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHSRALIKEKL------- 308
           NTI +  ++    ++   + LV + +  ++LQ L  K +   +H    IK          
Sbjct: 521 NTIQITVTA-CCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPG 579

Query: 309 TADPDSE--VATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEKKPTWTC 366
           T  P+ E  V  T+++VSL CP+   R+ +P R   C H+Q FD   YLQ+N ++ TW C
Sbjct: 580 TPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRC 639

Query: 367 PVCDKKAPYESLIIDGLFMEIL--SSCSDCDEIQFMEDGSWCPMKPKKEASEVCPPPGYG 424
           PVC+K A  E L +D   + IL     SD +EI      SW P+  K +      P G  
Sbjct: 640 PVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPA 699

Query: 425 L 425
           L
Sbjct: 700 L 700


>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
           sapiens]
          Length = 894

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 276 LVRQLTAGTLLQKLRAKGIRNPDHSRALIKEKL-------TADPDSE--VATTSLRVSLM 326
           LV + +  ++LQ L  K +   +H    IK          T  P+ E  V  T+++VSL 
Sbjct: 514 LVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLK 573

Query: 327 CPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFME 386
           CP+   R+ +P R   C H+Q FD   YLQ+N ++ TW CPVC+K A  E L +D   + 
Sbjct: 574 CPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLG 633

Query: 387 IL--SSCSDCDEIQFMEDGSWCPMKPKKEASEVCPPPGYGL 425
           IL     SD +EI      SW P+  K +      P G  L
Sbjct: 634 ILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPAL 674


>gi|4507493 thrombopoietin precursor [Homo sapiens]
          Length = 353

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 36/98 (36%), Positives = 41/98 (41%), Gaps = 28/98 (28%)

Query: 51  PSVQMKIKELY---RRRFP---RKTLGPSDLS-----LLSLPPGTSPVGSPGP------- 92
           P    +I EL    R  FP   R+TLG  D+S       SLPP   P  SP P       
Sbjct: 244 PGYLNRIHELLNGTRGLFPGPSRRTLGAPDISSGTSDTGSLPPNLQPGYSPSPTHPPTGQ 303

Query: 93  --LAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
             L P+PPTL        P   V +HP LP P  P  T
Sbjct: 304 YTLFPLPPTL--------PTPVVQLHPLLPDPSAPTPT 333


>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
           sapiens]
          Length = 1242

 Score = 37.4 bits (85), Expect = 0.042
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 7/47 (14%)

Query: 580 SHCSATPAPPPGRVSSIVAPGGALREGHGGPLPSG----PSLTGCRS 622
           +HCSA+P P PG   S  +PG    +G G P  S     PS  GCRS
Sbjct: 668 THCSASPEPGPGSTGSSESPGS---QGPGSPEGSAPLEPPSQQGCRS 711


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 37.0 bits (84), Expect = 0.055
 Identities = 67/261 (25%), Positives = 99/261 (37%), Gaps = 35/261 (13%)

Query: 71   GPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPD-VTM 129
            GP    L  L  G  P G P    P PP  L+ G +LGP   V   PP   P  P   + 
Sbjct: 4268 GPQTGPLQELGAGPRPQGPPR--LPAPPGALSTGPVLGP---VHPTPPPSSPQEPKRPSQ 4322

Query: 130  KPLPFYEVYGELIRPTTLASTSSQR---FEEAHFTFALTPQQVQQILTSREVLPGAKCDY 186
             P P  ++  E   P T   T   +    E      +    Q+   L S+ + P    D 
Sbjct: 4323 LPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQLADTLFSKGLGPWDPPDN 4382

Query: 187  TIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYL--------PPTKNGAEPKRP 238
                     L ET  P++    P    +VNG++ P    L         P   GA+  + 
Sbjct: 4383 ---------LAETQKPEQSSLVPGHLDQVNGQVVPEASQLSIKQEPREEPCALGAQSVK- 4432

Query: 239  SRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVR----QLTAGTLLQKLRAKGI 294
             R  N  P+     T  + ++    SE G  + L   L+R    QL+ G   + LRA+  
Sbjct: 4433 -REANGEPIG-APGTSNHLLLAGPRSEAG--HLLLQKLLRAKNVQLSTGRGSEGLRAEIN 4488

Query: 295  RNPDHSRALIKEKLTADPDSE 315
             + D   A +++KL   P ++
Sbjct: 4489 GHIDSKLAGLEQKLQGTPSNK 4509



 Score = 33.9 bits (76), Expect = 0.46
 Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 12/80 (15%)

Query: 71  GPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHP------PLPQPVH 124
           G   LS L   P  S  G P PL+P+P  L      L P  E  + P      PLP P+ 
Sbjct: 887 GEPSLSPLLGEPALSEPGEP-PLSPLPEELP-----LSPSGEPSLSPQLMPPDPLPPPLS 940

Query: 125 PDVTMKPLPFYEVYGELIRP 144
           P +T    P     GEL  P
Sbjct: 941 PIITAAAPPALSPLGELEYP 960



 Score = 33.5 bits (75), Expect = 0.61
 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 72  PSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVTMKP 131
           P + S LS PP  SP+  P   +P  P   +P   L P  E    P L  P+ P     P
Sbjct: 488 PLEESPLSPPPEESPLSPPPESSPFSPLEESP---LSPPEESPPSPALETPLSPPPEASP 544

Query: 132 L--PFYE 136
           L  PF E
Sbjct: 545 LSPPFEE 551



 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 74   DLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGT--LLGPKREVDMHPPLPQPV 123
            D+  LS PP   P   P PLAP P    +P T  L+    E    PP+P P+
Sbjct: 4902 DVRQLSAPPPEEPSPPPSPLAPSP---ASPPTEPLVELPTEPLAEPPVPSPL 4950


>gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]
          Length = 443

 Score = 37.0 bits (84), Expect = 0.055
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 58  KELYRRRFPRKTLGPSDLSLLSLPPGTSPVG-SPGPL--APIPPTLLAPGTLLGPKREVD 114
           KELYR+R  ++   P    ++ LP  T  +   P PL   P P + L PG + G   E D
Sbjct: 314 KELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRLPPGIIGG---EYD 370

Query: 115 MHPPLPQPVHPDVTMKPLP 133
             P LP    P  ++ P P
Sbjct: 371 QRPTLPYVGDPISSLIPGP 389


>gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens]
          Length = 522

 Score = 37.0 bits (84), Expect = 0.055
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 58  KELYRRRFPRKTLGPSDLSLLSLPPGTSPVG-SPGPL--APIPPTLLAPGTLLGPKREVD 114
           KELYR+R  ++   P    ++ LP  T  +   P PL   P P + L PG + G   E D
Sbjct: 393 KELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRLPPGIIGG---EYD 449

Query: 115 MHPPLPQPVHPDVTMKPLP 133
             P LP    P  ++ P P
Sbjct: 450 QRPTLPYVGDPISSLIPGP 468


>gi|4507691 transformation/transcription domain-associated protein
           [Homo sapiens]
          Length = 3830

 Score = 36.6 bits (83), Expect = 0.072
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 25/116 (21%)

Query: 30  KSGRKHELLAKALHLLKSSCAPSVQMKIKELYRRRFPRKTLGPSDLSLLSLP-----PGT 84
           +SG   ++L + L +         + ++  ++++  P+  LG  + +L  +P     PG 
Sbjct: 437 ESGNGRDVLMRMLEVFVLKFHTIARYQLSAIFKKCKPQSELGAVEAALPGVPTAPAAPGP 496

Query: 85  SPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVTMKPLPFYEVYGE 140
           +P  +P P AP PP                  PP P P  P VT  P+P +E  GE
Sbjct: 497 APSPAPVP-APPPP------------------PPPPPPATP-VTPAPVPPFEKQGE 532


>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
          Length = 1303

 Score = 36.6 bits (83), Expect = 0.072
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 86  PVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDV 127
           P G PGP+ P  P +  PG + GP    DMHP +   +HPD+
Sbjct: 605 PGGPPGPMGP-GPNMGPPGPMGGPMHP-DMHPDMHPDMHPDM 644



 Score = 32.7 bits (73), Expect = 1.0
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 18/115 (15%)

Query: 54  QMKIKELYRRRFPRKTLGPSDLSLLSLPPG-------TSPVGSP---GPLAPIPPTLLAP 103
           + +++EL ++        P  + LL  PP        TSP G P   GP  P PP    P
Sbjct: 493 EKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPPPPPPPP 552

Query: 104 GTLLGPKREVDMHPPL-PQPV-HPDVTMKPLPFYEVYGELIRPT-TLASTSSQRF 155
           G    P+  + +H PL PQ +   D+  K +P   ++  ++RPT  LA     RF
Sbjct: 553 GP---PQMPMPVHEPLSPQQLQQQDMYNKKIP--SLFEIVVRPTGQLAEKLGVRF 602


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 69  TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
           TL P  +S     PG  P   PGP  P PP    P  + GP    +M PP P  V P + 
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273

Query: 129 MKP 131
            +P
Sbjct: 274 GQP 276


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 69  TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
           TL P  +S     PG  P   PGP  P PP    P  + GP    +M PP P  V P + 
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273

Query: 129 MKP 131
            +P
Sbjct: 274 GQP 276


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 69  TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
           TL P  +S     PG  P   PGP  P PP    P  + GP    +M PP P  V P + 
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273

Query: 129 MKP 131
            +P
Sbjct: 274 GQP 276


>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform D [Homo sapiens]
          Length = 1616

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 69  TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
           TL P  +S     PG  P   PGP  P PP    P  + GP    +M PP P  V P + 
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273

Query: 129 MKP 131
            +P
Sbjct: 274 GQP 276


>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform C [Homo sapiens]
          Length = 1617

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 69  TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
           TL P  +S     PG  P   PGP  P PP    P  + GP    +M PP P  V P + 
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273

Query: 129 MKP 131
            +P
Sbjct: 274 GQP 276


>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 69  TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
           TL P  +S     PG  P   PGP  P PP    P  + GP    +M PP P  V P + 
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273

Query: 129 MKP 131
            +P
Sbjct: 274 GQP 276


>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 69  TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
           TL P  +S     PG  P   PGP  P PP    P  + GP    +M PP P  V P + 
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273

Query: 129 MKP 131
            +P
Sbjct: 274 GQP 276


>gi|21040334 B-cell CLL/lymphoma 11B isoform 1 [Homo sapiens]
          Length = 894

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 22/93 (23%)

Query: 439 SENKKKVEVIDLTIESSSDEED--LPPTKKHC----SVTSAAIPA-LPGSKGVLTSGHQP 491
           SE +K  E +++ I+ + DE+D  L PTK  C    ++     PA LP    +  S H  
Sbjct: 104 SELRKVSEPVEIGIQVTPDEDDHLLSPTKGICPKQENIAGPCRPAQLPAVAPIAASSHPH 163

Query: 492 SSVLRSP--AMGTLGGDFLSSLPLHEYPPAFPL 522
           SSV+ SP  A+G L             PP  PL
Sbjct: 164 SSVITSPLRALGAL-------------PPCLPL 183


>gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]
          Length = 1185

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 560 FQYRGTPSHFLGPLAPTLGSSHCSATPAPPPGRVSSIVAPGGALREGHGGPLPSGPSLTG 619
           FQYRG P    G      G+S     P PPPG  +   +  G +  G    L +G    G
Sbjct: 115 FQYRGGPG--AGAAGGAAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASPGLGAGAGAAG 172

Query: 620 C 620
           C
Sbjct: 173 C 173


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 17/139 (12%)

Query: 31   SGRKHELLAKALHLLKSSCAPSVQM-KIKELYRRRFPRKTLGPSDLSL--LSLPPGTSPV 87
            S R+HE++ KA   LK       Q+ K+K+          L P +  L   S  PG  P 
Sbjct: 1449 SQRQHEIILKAAQELKMLREQKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYP- 1507

Query: 88   GSPGPLAPIPPTLLAPGTLLGP-----KREVDM-HPPLPQPVHPDVTMKPLPFYEVYGEL 141
              PG   P PP    PG+++ P     +  V +  PP+P P  P     P P       +
Sbjct: 1508 -PPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPP-----PPV 1561

Query: 142  IRPTTLASTSSQRFEEAHF 160
            I+P T ++   +R++E  F
Sbjct: 1562 IKPQT-SAVEQERWDEDSF 1579



 Score = 30.8 bits (68), Expect = 3.9
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 12/73 (16%)

Query: 66  PRKTLGPSDLSLLSLPPGTSPVG----SPGPLAPIPPTLLA-PGTLLGPKREVDMHPPLP 120
           P   L P  LS    PP   P      +P P+ P+PP   A P   + P       P +P
Sbjct: 587 PPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPP-------PGVP 639

Query: 121 QPVHPDVTMKPLP 133
           Q + P +T  P+P
Sbjct: 640 QGIPPQLTAAPVP 652


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 81   PPGTSPVGSPGPLAPIP-PTLLAPGTLLGPKREVDMHPPLPQPVHPDVTMKPLP 133
            PP  +P   P P  P P P L +P  L+ P       PPLP P  P +   P P
Sbjct: 1462 PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPP 1515


>gi|12597625 activating transcription factor 5 [Homo sapiens]
          Length = 282

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 14/61 (22%)

Query: 80  LPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMH-------PPLPQPVHPDVTMKPL 132
           LPPGT P  SP      PP L A  +LL  K+E++         PPLP P  P +   PL
Sbjct: 83  LPPGTLPQPSP-----TPPDLEAMASLL--KKELEQMEDFFLDAPPLPPPSPPPLPPPPL 135

Query: 133 P 133
           P
Sbjct: 136 P 136


>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
          Length = 424

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 11/63 (17%)

Query: 81  PPGTSPVGSPGPLAPI----PPTLLAPGTLLGPKR-------EVDMHPPLPQPVHPDVTM 129
           PP  SP+G PGP+ P     PP L+ P    GP R          + PP P P  P    
Sbjct: 356 PPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPR 415

Query: 130 KPL 132
            PL
Sbjct: 416 GPL 418


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 16/37 (43%), Positives = 17/37 (45%)

Query: 82  PGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPP 118
           P   P G PGP  P PP  + P  L GP    D  PP
Sbjct: 239 PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPP 275



 Score = 33.9 bits (76), Expect = 0.46
 Identities = 18/47 (38%), Positives = 19/47 (40%)

Query: 81  PPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDV 127
           PP   P   PGP  P PP  L P   L P   +   PP   P  P V
Sbjct: 311 PPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHV 357


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 78  LSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVTMKPLP 133
           L LPP   P G P    P PP    PG  + P   +   PP P P HP VT+ P P
Sbjct: 679 LPLPP---PPGFPPLPPPPPPPPPQPGFPMPP--PLPPPPPPPPPAHPAVTVPPPP 729


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,097,561
Number of Sequences: 37866
Number of extensions: 1753570
Number of successful extensions: 9301
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 8628
Number of HSP's gapped (non-prelim): 867
length of query: 628
length of database: 18,247,518
effective HSP length: 108
effective length of query: 520
effective length of database: 14,157,990
effective search space: 7362154800
effective search space used: 7362154800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press