Guide to the Human Genome
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Name: SV2A Sequence: fasta or formatted (742aa) NCBI GI: 216548223
Description:

synaptic vesicle glycoprotein 2

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         56           3
 C cysteine            1.9         14           1
 D aspartate           4.7         35           5
 E glutamate           6.9         51           3
 F phenylalanine       7.8         58           2
 G glycine            10.4         77           2
 H histidine           2.0         15           1
 I isoleucine          4.3         32           2
 K lysine              3.5         26           2
 L leucine             9.4         70           2
 M methionine          3.1         23           3
 N asparagine          2.6         19           1
 P proline             2.8         21           2
 Q glutamine           3.1         23           2
 R arginine            5.5         41           2
 S serine              7.7         57           2
 T threonine           4.3         32           2
 V valine              7.0         52           2
 W tryptophan          1.9         14           1
 Y tyrosine            3.5         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synaptic vesicle glycoprotein 2 
SV2C                  0.616   synaptic vesicle glycoprotein 2C 
SV2B                  0.585   synaptic vesicle protein 2B homolog 
SVOP                  0.067   SV2 related protein 
SVOPL                 0.056   SVOP-like isoform 1 
SLC22A5               0.038   solute carrier family 22 member 5 
SLC22A13              0.034   solute carrier family 22 (organic anion transporter...
SLC22A7               0.032   solute carrier family 22 member 7 isoform b 
SLC22A7               0.032   solute carrier family 22 member 7 isoform a 
SLC22A14              0.029   organic cation transporter like 4 
SLC22A2               0.028   solute carrier family 22 member 2 
SLC22A1               0.028   solute carrier family 22 member 1 isoform b 
SLC22A1               0.028   solute carrier family 22 member 1 isoform a 
SLC22A15              0.027   solute carrier family 22, member 15 
SLC22A4               0.026   solute carrier family 22 member 4 
SLC22A3               0.024   solute carrier family 22 member 3 
SLC22A6               0.023   solute carrier family 22 member 6 isoform d 
SLC22A6               0.023   solute carrier family 22 member 6 isoform c 
SLC22A6               0.023   solute carrier family 22 member 6 isoform b 
SLC22A6               0.023   solute carrier family 22 member 6 isoform a 
SLC22A8               0.022   solute carrier family 22 member 8 
SLC22A16              0.021   solute carrier family 22, member 16 
SVOPL                 0.021   SVOP-like isoform 2 
SLC2A8                0.020   solute carrier family 2 (facilitated glucose transpo...
SLC22A11              0.020   solute carrier family 22 member 11 
SLC22A20              0.019   solute carrier family 22, member 20 
SLC2A11               0.018   glucose transporter protein 10 isoform a 
SLC2A11               0.018   glucose transporter protein 10 isoform c 
SLC2A11               0.018   glucose transporter protein 10 isoform b 
SPNS1                 0.017   spinster homolog 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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