Guide to the Human Genome
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Name: ZUFSP Sequence: fasta or formatted (578aa) NCBI GI: 21450836
Description:

zinc finger with UFM1-specific peptidase domain

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         22           2
 C cysteine            3.8         22           1
 D aspartate           5.0         29           2
 E glutamate           8.8         51           2
 F phenylalanine       2.9         17           1
 G glycine             6.2         36           2
 H histidine           4.0         23           1
 I isoleucine          5.4         31           2
 K lysine              6.7         39           2
 L leucine            10.0         58           2
 M methionine          2.9         17           2
 N asparagine          4.5         26           2
 P proline             3.8         22           2
 Q glutamine           6.4         37           3
 R arginine            4.8         28           2
 S serine              8.3         48           2
 T threonine           4.7         27           2
 V valine              3.8         22           2
 W tryptophan          0.9          5           1
 Y tyrosine            3.1         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger with UFM1-specific peptidase domain [Hom... 
ZNF840                0.024   PREDICTED: zinc finger protein 840 
ZNF840                0.024   PREDICTED: zinc finger protein 840 
ZNF840                0.024   PREDICTED: zinc finger protein 840 
PRDM15                0.024   PR domain containing 15 isoform 2 
PRDM15                0.024   PR domain containing 15 isoform 1 
ZNF596                0.016   zinc finger protein 596 
ZNF596                0.016   zinc finger protein 596 
ZNF596                0.016   zinc finger protein 596 
LOC729747             0.016   similar to zinc finger protein 709 
ZNF521                0.015   zinc finger protein 521 
ZNF311                0.015   zinc finger protein 311 
ZNF561                0.015   zinc finger protein 561 
ZNF43                 0.015   zinc finger protein 43 
ZNF236                0.015   zinc finger protein 236 
ZNF836                0.015   zinc finger protein 836 
ZNF81                 0.015   zinc finger protein 81 
ZNF92                 0.015   zinc finger protein 92 isoform 1 
ZNF92                 0.015   zinc finger protein 92 isoform 2 
ZNF778                0.015   zinc finger protein 778 
ZNF536                0.014   zinc finger protein 536 
ZNF708                0.014   zinc finger protein 708 
ZNF564                0.013   zinc finger protein 564 
ZNF99                 0.013   zinc finger protein 99 
UFSP2                 0.013   UFM1-specific peptidase 2 
ZNF562                0.013   zinc finger protein 562 isoform b 
ZNF562                0.013   zinc finger protein 562 isoform a 
ZNF562                0.013   zinc finger protein 562 isoform a 
ZNF214                0.013   zinc finger protein 214 
NONO                  0.013   non-POU domain containing, octamer-binding isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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