Guide to the Human Genome
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Name: SYK Sequence: fasta or formatted (635aa) NCBI GI: 21361553
Description:

spleen tyrosine kinase isoform 1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [612aa] spleen tyrosine kinase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         45           2
 C cysteine            1.4          9           1
 D aspartate           4.3         27           1
 E glutamate           7.6         48           2
 F phenylalanine       3.0         19           3
 G glycine             7.9         50           2
 H histidine           3.0         19           2
 I isoleucine          4.1         26           2
 K lysine              7.7         49           2
 L leucine             9.4         60           2
 M methionine          3.0         19           1
 N asparagine          4.7         30           2
 P proline             5.2         33           1
 Q glutamine           4.4         28           2
 R arginine            4.9         31           1
 S serine              6.0         38           2
 T threonine           3.6         23           2
 V valine              5.7         36           2
 W tryptophan          1.7         11           1
 Y tyrosine            5.4         34           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spleen tyrosine kinase isoform 1 
SYK                   0.952   spleen tyrosine kinase isoform 2 
ZAP70                 0.518   zeta-chain associated protein kinase 70kDa isoform 1...
ZAP70                 0.279   zeta-chain associated protein kinase 70kDa isoform 2...
PTK2                  0.146   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.146   PTK2 protein tyrosine kinase 2 isoform a 
ABL1                  0.141   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.141   c-abl oncogene 1, receptor tyrosine kinase isoform b...
ERBB4                 0.140   v-erb-a erythroblastic leukemia viral oncogene homo...
ERBB4                 0.140   v-erb-a erythroblastic leukemia viral oncogene homolo...
ABL2                  0.139   arg tyrosine kinase isoform c 
ABL2                  0.139   arg tyrosine kinase isoform b 
ABL2                  0.139   arg tyrosine kinase isoform e 
ABL2                  0.139   arg tyrosine kinase isoform d 
ABL2                  0.139   arg tyrosine kinase isoform a 
EGFR                  0.139   epidermal growth factor receptor isoform a precursor...
PTK2B                 0.133   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
PTK2B                 0.133   PTK2B protein tyrosine kinase 2 beta isoform b [Homo...
PTK2B                 0.133   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
PTK2B                 0.133   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
FRK                   0.132   fyn-related kinase 
LCK                   0.131   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.131   lymphocyte-specific protein tyrosine kinase precurs...
EPHB1                 0.130   ephrin receptor EphB1 precursor 
TNK2                  0.129   tyrosine kinase, non-receptor, 2 isoform 1 
TNK2                  0.129   tyrosine kinase, non-receptor, 2 isoform 2 
ERBB2                 0.129   erbB-2 isoform b 
ERBB2                 0.129   erbB-2 isoform a 
FER                   0.129   fer (fps/fes related) tyrosine kinase 
FES                   0.129   feline sarcoma oncogene isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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