RGR 12938

Name: RGR	Sequence: fasta or formatted (295aa)		NCBI GI: 21361329
Description: retinal G-protein coupled receptor isoform 1		Referenced in: Photoreceptors and Related Functions
Other entries for this name: alt prot [253aa] retinal G-protein coupled receptor isoform 3 alt prot [291aa] retinal G-protein coupled receptor isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 29 2 C cysteine 3.1 9 2 D aspartate 2.4 7 1 E glutamate 3.1 9 1 F phenylalanine 4.7 14 2 G glycine 6.8 20 1 H histidine 2.4 7 2 I isoleucine 4.4 13 1 K lysine 3.1 9 1 L leucine 14.9 44 3 M methionine 2.7 8 1 N asparagine 3.1 9 1 P proline 4.4 13 1 Q glutamine 2.7 8 1 R arginine 3.7 11 2 S serine 9.5 28 2 T threonine 7.1 21 2 V valine 5.8 17 1 W tryptophan 2.7 8 1 Y tyrosine 3.7 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinal G-protein coupled receptor isoform 1 RGR 0.976 retinal G-protein coupled receptor isoform 2 RGR 0.814 retinal G-protein coupled receptor isoform 3 RRH 0.179 peropsin OPN4 0.148 opsin 4 isoform 1 OPN5 0.136 opsin 5 isoform 1 OPN4 0.134 opsin 4 isoform 2 OPN3 0.130 opsin 3 RHO 0.122 rhodopsin OPN1MW2 0.080 opsin 1 (cone pigments), medium-wave-sensitive 2 [H... OPN1MW 0.080 opsin 1 (cone pigments), medium-wave-sensitive OPN1LW 0.077 opsin 1 (cone pigments), long-wave-sensitive GPR50 0.063 G protein-coupled receptor 50 MTNR1A 0.061 melatonin receptor 1A OPN5 0.056 opsin 5 isoform 2 HTR7 0.056 5-hydroxytryptamine receptor 7 isoform b HTR7 0.056 5-hydroxytryptamine receptor 7 isoform d HTR7 0.056 5-hydroxytryptamine receptor 7 isoform a MTNR1B 0.052 melatonin receptor 1B OPN1SW 0.052 opsin 1 (cone pigments), short-wave-sensitive TRHR 0.049 thyrotropin-releasing hormone receptor ADRB2 0.049 adrenergic, beta-2-, receptor, surface ADRB1 0.047 beta-1-adrenergic receptor TACR3 0.047 tachykinin receptor 3 OXER1 0.047 G-protein coupled receptor TG1019 ADRB3 0.043 adrenergic, beta-3-, receptor HTR1E 0.042 5-hydroxytryptamine (serotonin) receptor 1E LTB4R 0.042 leukotriene B4 receptor GHSR 0.042 growth hormone secretagogue receptor isoform 1a [Hom... GHSR 0.042 growth hormone secretagogue receptor isoform 1b [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.