Guide to the Human Genome
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Name: MAPKAPK5 Sequence: fasta or formatted (473aa) NCBI GI: 21237768
Description:

MAP kinase-activated protein kinase 5 isoform 2

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [471aa] MAP kinase-activated protein kinase 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         29           1
 C cysteine            1.7          8           1
 D aspartate           5.1         24           1
 E glutamate           8.2         39           3
 F phenylalanine       3.0         14           1
 G glycine             4.0         19           2
 H histidine           3.8         18           2
 I isoleucine          6.1         29           2
 K lysine              8.0         38           2
 L leucine             9.9         47           2
 M methionine          3.4         16           2
 N asparagine          4.0         19           2
 P proline             5.1         24           2
 Q glutamine           5.5         26           2
 R arginine            5.5         26           2
 S serine              6.6         31           2
 T threonine           4.2         20           2
 V valine              6.3         30           2
 W tryptophan          1.3          6           1
 Y tyrosine            2.1         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAP kinase-activated protein kinase 5 isoform 2 [Hom... 
MAPKAPK5              0.989   MAP kinase-activated protein kinase 5 isoform 1 [Hom...
MAPKAPK2              0.271   mitogen-activated protein kinase-activated protein k...
MAPKAPK3              0.256   mitogen-activated protein kinase-activated protein ki...
MAPKAPK2              0.252   mitogen-activated protein kinase-activated protein k...
RPS6KA5               0.186   ribosomal protein S6 kinase, polypeptide 5 isoform a...
CAMK1G                0.168   calcium/calmodulin-dependent protein kinase IG [Homo...
MKNK2                 0.167   MAP kinase-interacting serine/threonine kinase 2 iso...
RPS6KA1               0.164   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.164   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA4               0.164   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
MKNK2                 0.164   MAP kinase-interacting serine/threonine kinase 2 iso...
RPS6KA2               0.161   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.161   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA4               0.160   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
DCLK2                 0.160   doublecortin-like kinase 2 isoform b 
DCLK2                 0.160   doublecortin-like kinase 2 isoform a 
CAMK4                 0.158   calcium/calmodulin-dependent protein kinase IV 
MKNK1                 0.157   MAP kinase-interacting serine/threonine kinase 1 is...
CAMK2D                0.156   calcium/calmodulin-dependent protein kinase II delt...
RPS6KA3               0.156   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
CAMK1                 0.156   calcium/calmodulin-dependent protein kinase I 
PNCK                  0.155   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.155   pregnancy upregulated non-ubiquitously expressed Ca...
CAMK2D                0.154   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.154   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.154   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.154   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.154   calcium/calmodulin-dependent protein kinase II delta...
CAMK1D                0.153   calcium/calmodulin-dependent protein kinase ID isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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