Guide to the Human Genome
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Search of human proteins with 21071056

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
         (1647 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|192807312 SWI/SNF-related matrix-associated actin-dependent r...  3327   0.0  
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re...  3327   0.0  
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...  3311   0.0  
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...  3241   0.0  
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r...  3235   0.0  
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...  3234   0.0  
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r...  3229   0.0  
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...  2402   0.0  
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...  2396   0.0  
gi|164419749 SWI/SNF-related matrix-associated actin-dependent r...   470   e-132
gi|21071044 SWI/SNF-related matrix-associated actin-dependent re...   461   e-129
gi|21071058 SWI/SNF-related matrix-associated actin-dependent re...   449   e-125
gi|118421089 chromodomain helicase DNA binding protein 2 isoform...   412   e-114
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa...   396   e-109
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa...   394   e-109
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ...   393   e-109
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...   393   e-109
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ...   392   e-108
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa...   390   e-108
gi|21914927 helicase, lymphoid-specific [Homo sapiens]                382   e-105
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...   367   e-101
gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s...   362   2e-99
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa...   358   2e-98
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...   354   4e-97
gi|148612870 chromodomain helicase DNA binding protein 1-like [H...   353   8e-97
gi|190358534 SWI/SNF-related, matrix-associated actin-dependent ...   306   1e-82
gi|190358536 SWI/SNF-related, matrix-associated actin-dependent ...   305   3e-82
gi|190358532 SWI/SNF-related, matrix-associated actin-dependent ...   305   3e-82
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]        274   6e-73
gi|38708321 INO80 complex homolog 1 [Homo sapiens]                    259   1e-68

>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 3327 bits (8627), Expect = 0.0
 Identities = 1647/1647 (100%), Positives = 1647/1647 (100%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60
            MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
Sbjct: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60

Query: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
            PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
Sbjct: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120

Query: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180
            PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
Sbjct: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180

Query: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240
            RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
Sbjct: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240

Query: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
            GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
Sbjct: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300

Query: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360
            KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
Sbjct: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360

Query: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420
            LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
Sbjct: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420

Query: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480
            VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
Sbjct: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480

Query: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540
            QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
Sbjct: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540

Query: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600
            LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
Sbjct: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600

Query: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660
            PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
Sbjct: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660

Query: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720
            GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
Sbjct: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720

Query: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780
            SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
Sbjct: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780

Query: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840
            MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
Sbjct: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840

Query: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900
            RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
Sbjct: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900

Query: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960
            YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
Sbjct: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960

Query: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020
            TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
Sbjct: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020

Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080
            GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080

Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140
            KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140

Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
            TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200

Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260
            VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260

Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320
            HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
Sbjct: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320

Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380
            LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
Sbjct: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380

Query: 1381 DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ 1440
            DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
Sbjct: 1381 DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ 1440

Query: 1441 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL 1500
            KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
Sbjct: 1441 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL 1500

Query: 1501 IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV 1560
            IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
Sbjct: 1501 IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV 1560

Query: 1561 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1620
            RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
Sbjct: 1561 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1620

Query: 1621 RAKPVVSDDDSEEEQEEDRSGSGSEED 1647
            RAKPVVSDDDSEEEQEEDRSGSGSEED
Sbjct: 1621 RAKPVVSDDDSEEEQEEDRSGSGSEED 1647


>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 3327 bits (8627), Expect = 0.0
 Identities = 1647/1647 (100%), Positives = 1647/1647 (100%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60
            MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
Sbjct: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60

Query: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
            PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
Sbjct: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120

Query: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180
            PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
Sbjct: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180

Query: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240
            RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
Sbjct: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240

Query: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
            GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
Sbjct: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300

Query: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360
            KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
Sbjct: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360

Query: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420
            LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
Sbjct: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420

Query: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480
            VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
Sbjct: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480

Query: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540
            QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
Sbjct: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540

Query: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600
            LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
Sbjct: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600

Query: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660
            PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
Sbjct: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660

Query: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720
            GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
Sbjct: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720

Query: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780
            SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
Sbjct: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780

Query: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840
            MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
Sbjct: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840

Query: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900
            RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
Sbjct: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900

Query: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960
            YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
Sbjct: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960

Query: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020
            TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
Sbjct: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020

Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080
            GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080

Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140
            KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140

Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
            TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200

Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260
            VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260

Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320
            HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
Sbjct: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320

Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380
            LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
Sbjct: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380

Query: 1381 DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ 1440
            DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
Sbjct: 1381 DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ 1440

Query: 1441 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL 1500
            KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
Sbjct: 1441 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL 1500

Query: 1501 IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV 1560
            IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
Sbjct: 1501 IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV 1560

Query: 1561 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1620
            RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
Sbjct: 1561 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1620

Query: 1621 RAKPVVSDDDSEEEQEEDRSGSGSEED 1647
            RAKPVVSDDDSEEEQEEDRSGSGSEED
Sbjct: 1621 RAKPVVSDDDSEEEQEEDRSGSGSEED 1647


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 3311 bits (8584), Expect = 0.0
 Identities = 1647/1679 (98%), Positives = 1647/1679 (98%), Gaps = 32/1679 (1%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60
            MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
Sbjct: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60

Query: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
            PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
Sbjct: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120

Query: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180
            PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
Sbjct: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180

Query: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240
            RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
Sbjct: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240

Query: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
            GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
Sbjct: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300

Query: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360
            KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
Sbjct: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360

Query: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420
            LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
Sbjct: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420

Query: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480
            VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
Sbjct: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480

Query: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540
            QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
Sbjct: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540

Query: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600
            LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
Sbjct: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600

Query: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660
            PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
Sbjct: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660

Query: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720
            GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
Sbjct: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720

Query: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780
            SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
Sbjct: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780

Query: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840
            MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
Sbjct: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840

Query: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900
            RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
Sbjct: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900

Query: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960
            YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
Sbjct: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960

Query: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020
            TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
Sbjct: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020

Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080
            GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080

Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140
            KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140

Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
            TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200

Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260
            VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260

Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320
            HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
Sbjct: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320

Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380
            LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
Sbjct: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380

Query: 1381 DSLTEKQWL--------------------------------KAIEEGTLEEIEEEVRQKK 1408
            DSLTEKQWL                                KAIEEGTLEEIEEEVRQKK
Sbjct: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440

Query: 1409 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1468
            SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA
Sbjct: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500

Query: 1469 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1528
            VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD
Sbjct: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560

Query: 1529 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1588
            VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES
Sbjct: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620

Query: 1589 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1647
            ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
Sbjct: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 3241 bits (8402), Expect = 0.0
 Identities = 1614/1647 (97%), Positives = 1614/1647 (97%), Gaps = 33/1647 (2%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60
            MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
Sbjct: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60

Query: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
            PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
Sbjct: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120

Query: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180
            PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
Sbjct: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180

Query: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240
            RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
Sbjct: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240

Query: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
            GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
Sbjct: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300

Query: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360
            KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
Sbjct: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360

Query: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420
            LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
Sbjct: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420

Query: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480
            VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
Sbjct: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480

Query: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540
            QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
Sbjct: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540

Query: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600
            LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
Sbjct: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600

Query: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660
            PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
Sbjct: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660

Query: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720
            GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
Sbjct: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720

Query: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780
            SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
Sbjct: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780

Query: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840
            MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
Sbjct: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840

Query: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900
            RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
Sbjct: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900

Query: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960
            YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
Sbjct: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960

Query: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020
            TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
Sbjct: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020

Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080
            GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080

Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140
            KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140

Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
            TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200

Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260
            VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE  
Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE-- 1258

Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320
                                           EEDEVPDDETVNQMIARHEEEFDLFMRMD
Sbjct: 1259 -------------------------------EEDEVPDDETVNQMIARHEEEFDLFMRMD 1287

Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380
            LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
Sbjct: 1288 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1347

Query: 1381 DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ 1440
            DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
Sbjct: 1348 DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ 1407

Query: 1441 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL 1500
            KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
Sbjct: 1408 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL 1467

Query: 1501 IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV 1560
            IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
Sbjct: 1468 IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV 1527

Query: 1561 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1620
            RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
Sbjct: 1528 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1587

Query: 1621 RAKPVVSDDDSEEEQEEDRSGSGSEED 1647
            RAKPVVSDDDSEEEQEEDRSGSGSEED
Sbjct: 1588 RAKPVVSDDDSEEEQEEDRSGSGSEED 1614


>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform C [Homo sapiens]
          Length = 1617

 Score = 3235 bits (8388), Expect = 0.0
 Identities = 1614/1650 (97%), Positives = 1614/1650 (97%), Gaps = 36/1650 (2%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60
            MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
Sbjct: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60

Query: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
            PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
Sbjct: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120

Query: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180
            PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
Sbjct: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180

Query: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240
            RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
Sbjct: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240

Query: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
            GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
Sbjct: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300

Query: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360
            KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
Sbjct: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360

Query: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420
            LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
Sbjct: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420

Query: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480
            VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
Sbjct: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480

Query: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540
            QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
Sbjct: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540

Query: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600
            LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
Sbjct: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600

Query: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660
            PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
Sbjct: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660

Query: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720
            GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
Sbjct: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720

Query: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780
            SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
Sbjct: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780

Query: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840
            MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
Sbjct: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840

Query: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900
            RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
Sbjct: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900

Query: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960
            YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
Sbjct: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960

Query: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020
            TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
Sbjct: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020

Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080
            GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080

Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140
            KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140

Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
            TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200

Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260
            VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE  
Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE-- 1258

Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320
                                           EEDEVPDDETVNQMIARHEEEFDLFMRMD
Sbjct: 1259 -------------------------------EEDEVPDDETVNQMIARHEEEFDLFMRMD 1287

Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380
            LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
Sbjct: 1288 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1347

Query: 1381 DSLTEKQW---LKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES 1437
            DSLTEKQW   LKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES
Sbjct: 1348 DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES 1407

Query: 1438 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY 1497
            KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
Sbjct: 1408 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY 1467

Query: 1498 YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF 1557
            YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
Sbjct: 1468 YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF 1527

Query: 1558 TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS 1617
            TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
Sbjct: 1528 TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS 1587

Query: 1618 RGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1647
            RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
Sbjct: 1588 RGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1617


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 3234 bits (8386), Expect = 0.0
 Identities = 1613/1647 (97%), Positives = 1613/1647 (97%), Gaps = 34/1647 (2%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60
            MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
Sbjct: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60

Query: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
            PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
Sbjct: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120

Query: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180
            PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
Sbjct: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180

Query: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240
            RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
Sbjct: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240

Query: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
            GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
Sbjct: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300

Query: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360
            KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
Sbjct: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360

Query: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420
            LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
Sbjct: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420

Query: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480
            VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
Sbjct: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480

Query: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540
            QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
Sbjct: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540

Query: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600
            LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
Sbjct: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600

Query: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660
            PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
Sbjct: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660

Query: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720
            GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
Sbjct: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720

Query: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780
            SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
Sbjct: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780

Query: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840
            MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
Sbjct: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840

Query: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900
            RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
Sbjct: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900

Query: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960
            YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
Sbjct: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960

Query: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020
            TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
Sbjct: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020

Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080
            GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080

Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140
            KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140

Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
            TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200

Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260
            VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE  
Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE-- 1258

Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320
                                           EEDEVPDDETVNQMIARHEEEFDLFMRMD
Sbjct: 1259 -------------------------------EEDEVPDDETVNQMIARHEEEFDLFMRMD 1287

Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380
            LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
Sbjct: 1288 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1347

Query: 1381 DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ 1440
            DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
Sbjct: 1348 DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ 1407

Query: 1441 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL 1500
            KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKD SSGRQLSEVFIQLPSRKELPEYYEL
Sbjct: 1408 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKD-SSGRQLSEVFIQLPSRKELPEYYEL 1466

Query: 1501 IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV 1560
            IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
Sbjct: 1467 IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV 1526

Query: 1561 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1620
            RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
Sbjct: 1527 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1586

Query: 1621 RAKPVVSDDDSEEEQEEDRSGSGSEED 1647
            RAKPVVSDDDSEEEQEEDRSGSGSEED
Sbjct: 1587 RAKPVVSDDDSEEEQEEDRSGSGSEED 1613


>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform D [Homo sapiens]
          Length = 1616

 Score = 3229 bits (8372), Expect = 0.0
 Identities = 1613/1650 (97%), Positives = 1613/1650 (97%), Gaps = 37/1650 (2%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60
            MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
Sbjct: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60

Query: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
            PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
Sbjct: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120

Query: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180
            PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
Sbjct: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180

Query: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240
            RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
Sbjct: 181  RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240

Query: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
            GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
Sbjct: 241  GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300

Query: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360
            KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
Sbjct: 301  KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360

Query: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420
            LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
Sbjct: 361  LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420

Query: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480
            VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
Sbjct: 421  VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480

Query: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540
            QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
Sbjct: 481  QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540

Query: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600
            LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
Sbjct: 541  LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600

Query: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660
            PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
Sbjct: 601  PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660

Query: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720
            GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
Sbjct: 661  GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720

Query: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780
            SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
Sbjct: 721  SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780

Query: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840
            MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
Sbjct: 781  MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840

Query: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900
            RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
Sbjct: 841  RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900

Query: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960
            YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
Sbjct: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960

Query: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020
            TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
Sbjct: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020

Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080
            GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080

Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140
            KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140

Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
            TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200

Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260
            VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE  
Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE-- 1258

Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320
                                           EEDEVPDDETVNQMIARHEEEFDLFMRMD
Sbjct: 1259 -------------------------------EEDEVPDDETVNQMIARHEEEFDLFMRMD 1287

Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380
            LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
Sbjct: 1288 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1347

Query: 1381 DSLTEKQW---LKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES 1437
            DSLTEKQW   LKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES
Sbjct: 1348 DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES 1407

Query: 1438 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY 1497
            KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKD SSGRQLSEVFIQLPSRKELPEY
Sbjct: 1408 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKD-SSGRQLSEVFIQLPSRKELPEY 1466

Query: 1498 YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF 1557
            YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
Sbjct: 1467 YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF 1526

Query: 1558 TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS 1617
            TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
Sbjct: 1527 TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS 1586

Query: 1618 RGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1647
            RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
Sbjct: 1587 RGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1616


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 2402 bits (6224), Expect = 0.0
 Identities = 1246/1666 (74%), Positives = 1368/1666 (82%), Gaps = 115/1666 (6%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 58
            MSTP  P G  P PGPSPGPGPSPG +LGPSPGP  SPGS HSMMGPSPGPPS  HP+PT
Sbjct: 1    MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT 59

Query: 59   QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 118
             G   +PQ+ MHQMHKP++ +H+KG+ +D     MKG GMR   H GMGPP SPMDQHSQ
Sbjct: 60   MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP-HPGMGPPQSPMDQHSQ 118

Query: 119  GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
            GY    PSPLG  EH SSP+   GP+  PQM     GA + G DPQA+ Q NRGP+PF+ 
Sbjct: 119  GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP 176

Query: 175  NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPG- 233
             QLHQLRAQI+AYKMLARGQPLP+ LQ+AVQGKR +PG+QQQ                  
Sbjct: 177  VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQ 236

Query: 234  -------PGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPE 286
                   P P       PA  NY+RP G                  PG    GP      
Sbjct: 237  QQPQQQPPQPQTQQQQQPALVNYNRPSG------------------PGPELSGP------ 272

Query: 287  GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV--PPAASPVMPPQTQSPGQPAQPAPMVP 344
                      STPQKL  P P GRPSPAPPA   PPAA+ V  P    P  P QP+P++ 
Sbjct: 273  ----------STPQKLPVPAPGGRPSPAPPAAAQPPAAA-VPGPSVPQPA-PGQPSPVLQ 320

Query: 345  LHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIEL 404
            L QKQSRI+PIQKP+GLDPVEILQEREYRLQARIAHRIQELENLPGSL  DLRTKAT+EL
Sbjct: 321  LQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVEL 380

Query: 405  KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
            KALRLLNFQRQLRQEVV CMRRDT LETALN+KAYKRSKRQ+LREAR+TEKLEKQQKIEQ
Sbjct: 381  KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440

Query: 465  ERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEK 524
            ERKRRQKHQEYLNSILQHAKDFKEYHRSV GKIQKL+KAVAT+HANTEREQKKE ERIEK
Sbjct: 441  ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 500

Query: 525  ERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKK 584
            ERMRRLMAEDEEGYRKLIDQKKD+RLAYLLQQTDEYVANLT LV +HK AQ AKEKKK++
Sbjct: 501  ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 560

Query: 585  KKKKA--ENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAW 642
            ++KK   ENAEG   A+GPDGEP+DE+SQMSDLPVKV H E+GK+L G +APKA QL+AW
Sbjct: 561  RRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 620

Query: 643  LEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVD 702
            LEMNPGYEVAPRSDSEES S+ EEE+EEEE  +          E+K + DP+S++VSE D
Sbjct: 621  LEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQET-------EEKILLDPNSEEVSEKD 673

Query: 703  ARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGL 762
            A+ IIE AKQDVDDEY + Q  ARG QSYY VAHA++ERV+KQSAL++NG LK YQ++GL
Sbjct: 674  AKQIIETAKQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGL 732

Query: 763  EWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEF 822
            EW+VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR+NGP+LIIVPLSTLSNW YEF
Sbjct: 733  EWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEF 792

Query: 823  DKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE 882
            DKWAPSVVK+SYKG+PA RR+ VPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE
Sbjct: 793  DKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE 852

Query: 883  GHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 942
            GHRMKNHHCKLTQVLNTHYVAPRR+LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW
Sbjct: 853  GHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 912

Query: 943  FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
            FNAPFAMTGE+VDLNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEYVIKCDMSA
Sbjct: 913  FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 972

Query: 1003 LQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEH 1062
            LQ++LYRHMQAKG+LLTDGSEKDKKGKGG KTLMNTIMQLRKICNHPYMFQHIEESF+EH
Sbjct: 973  LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1032

Query: 1063 LGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFK 1122
            LG++ G++ G +LYRASGKFELLDRILPKLRATNH+VLLFCQMTSLMTIMEDYFA+R F 
Sbjct: 1033 LGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFL 1092

Query: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
            YLRLDGTTK+EDR  LLK FNEPGS+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQ
Sbjct: 1093 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1152

Query: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE 1242
            DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE
Sbjct: 1153 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE 1212

Query: 1243 RRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETV 1302
            RRAFLQAILEHEE++E                                 EEDEVPDDET+
Sbjct: 1213 RRAFLQAILEHEEENE---------------------------------EEDEVPDDETL 1239

Query: 1303 NQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE 1362
            NQMIAR EEEFDLFMRMD+DRRRE+ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE
Sbjct: 1240 NQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE 1299

Query: 1363 EEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSS 1422
            EEK+FGRGSR R++VDYSD+LTEKQWL+AIE+G LEE+EEEVR KK  R+R  D D    
Sbjct: 1300 EEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPA-- 1357

Query: 1423 TPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLS 1482
                      K+D  K +K+RGRPPAEKLSPNPP LTK+M  I+D VI YKDSS GRQLS
Sbjct: 1358 ----------KEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSS-GRQLS 1406

Query: 1483 EVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLE 1542
            EVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSL DLEKDVMLLC NAQTFNLE
Sbjct: 1407 EVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLE 1466

Query: 1543 GSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRK 1602
            GS IYEDSIVLQSVF S RQKI KE++SE E +EEEEE +EE SESE++SVKVKIKL +K
Sbjct: 1467 GSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKK 1526

Query: 1603 -EKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1647
             +K +D+ K G++RP+RG +AKPVVSD DS+EEQ+E     GS  D
Sbjct: 1527 DDKGRDKGK-GKKRPNRG-KAKPVVSDFDSDEEQDEREQSEGSGTD 1570


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 2396 bits (6209), Expect = 0.0
 Identities = 1246/1683 (74%), Positives = 1369/1683 (81%), Gaps = 131/1683 (7%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 58
            MSTP  P G  P PGPSPGPGPSPG +LGPSPGP  SPGS HSMMGPSPGPPS  HP+PT
Sbjct: 1    MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT 59

Query: 59   QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 118
             G   +PQ+ MHQMHKP++ +H+KG+ +D     MKG GMR   H GMGPP SPMDQHSQ
Sbjct: 60   MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP-HPGMGPPQSPMDQHSQ 118

Query: 119  GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174
            GY    PSPLG  EH SSP+   GP+  PQM     GA + G DPQA+ Q NRGP+PF+ 
Sbjct: 119  GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP 176

Query: 175  NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPG- 233
             QLHQLRAQI+AYKMLARGQPLP+ LQ+AVQGKR +PG+QQQ                  
Sbjct: 177  VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQ 236

Query: 234  -------PGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPE 286
                   P P       PA  NY+RP G                  PG    GP      
Sbjct: 237  QQPQQQPPQPQTQQQQQPALVNYNRPSG------------------PGPELSGP------ 272

Query: 287  GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV--PPAASPVMPPQTQSPGQPAQPAPMVP 344
                      STPQKL  P P GRPSPAPPA   PPAA+ V  P    P  P QP+P++ 
Sbjct: 273  ----------STPQKLPVPAPGGRPSPAPPAAAQPPAAA-VPGPSVPQPA-PGQPSPVLQ 320

Query: 345  LHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIEL 404
            L QKQSRI+PIQKP+GLDPVEILQEREYRLQARIAHRIQELENLPGSL  DLRTKAT+EL
Sbjct: 321  LQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVEL 380

Query: 405  KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
            KALRLLNFQRQLRQEVV CMRRDT LETALN+KAYKRSKRQ+LREAR+TEKLEKQQKIEQ
Sbjct: 381  KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440

Query: 465  ERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEK 524
            ERKRRQKHQEYLNSILQHAKDFKEYHRSV GKIQKL+KAVAT+HANTEREQKKE ERIEK
Sbjct: 441  ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 500

Query: 525  ERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKK 584
            ERMRRLMAEDEEGYRKLIDQKKD+RLAYLLQQTDEYVANLT LV +HK AQ AKEKKK++
Sbjct: 501  ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 560

Query: 585  KKKKA--ENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAW 642
            ++KK   ENAEG   A+GPDGEP+DE+SQMSDLPVKV H E+GK+L G +APKA QL+AW
Sbjct: 561  RRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 620

Query: 643  LEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVD 702
            LEMNPGYEVAPRSDSEES S+ EEE+EEEE  +          E+K + DP+S++VSE D
Sbjct: 621  LEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQET-------EEKILLDPNSEEVSEKD 673

Query: 703  ARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGL 762
            A+ IIE AKQDVDDEY + Q  ARG QSYY VAHA++ERV+KQSAL++NG LK YQ++GL
Sbjct: 674  AKQIIETAKQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGL 732

Query: 763  EWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEF 822
            EW+VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR+NGP+LIIVPLSTLSNW YEF
Sbjct: 733  EWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEF 792

Query: 823  DKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE 882
            DKWAPSVVK+SYKG+PA RR+ VPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE
Sbjct: 793  DKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE 852

Query: 883  GHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 942
            GHRMKNHHCKLTQVLNTHYVAPRR+LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW
Sbjct: 853  GHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 912

Query: 943  FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
            FNAPFAMTGE+VDLNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEYVIKCDMSA
Sbjct: 913  FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 972

Query: 1003 LQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEH 1062
            LQ++LYRHMQAKG+LLTDGSEKDKKGKGG KTLMNTIMQLRKICNHPYMFQHIEESF+EH
Sbjct: 973  LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1032

Query: 1063 LGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFK 1122
            LG++ G++ G +LYRASGKFELLDRILPKLRATNH+VLLFCQMTSLMTIMEDYFA+R F 
Sbjct: 1033 LGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFL 1092

Query: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
            YLRLDGTTK+EDR  LLK FNEPGS+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQ
Sbjct: 1093 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1152

Query: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE 1242
            DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE
Sbjct: 1153 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE 1212

Query: 1243 RRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETV 1302
            RRAFLQAILEHEE++E                                 EEDEVPDDET+
Sbjct: 1213 RRAFLQAILEHEEENE---------------------------------EEDEVPDDETL 1239

Query: 1303 NQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE 1362
            NQMIAR EEEFDLFMRMD+DRRRE+ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE
Sbjct: 1240 NQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE 1299

Query: 1363 EEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSS 1422
            EEK+FGRGSR R++VDYSD+LTEKQWL+AIE+G LEE+EEEVR KK  R+R  D D    
Sbjct: 1300 EEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPA-- 1357

Query: 1423 TPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKD-------- 1474
                      K+D  K +K+RGRPPAEKLSPNPP LTK+M  I+D VI YKD        
Sbjct: 1358 ----------KEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVP 1407

Query: 1475 ---------SSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDL 1525
                     +SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSL DL
Sbjct: 1408 SNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDL 1467

Query: 1526 EKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEG 1585
            EKDVMLLC NAQTFNLEGS IYEDSIVLQSVF S RQKI KE++SE E +EEEEE +EE 
Sbjct: 1468 EKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEE 1527

Query: 1586 SESESRSVKVKIKLGRK-EKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGS 1644
            SESE++SVKVKIKL +K +K +D+ K G++RP+RG +AKPVVSD DS+EEQ+E     GS
Sbjct: 1528 SESEAKSVKVKIKLNKKDDKGRDKGK-GKKRPNRG-KAKPVVSDFDSDEEQDEREQSEGS 1585

Query: 1645 EED 1647
              D
Sbjct: 1586 GTD 1588


>gi|164419749 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a1 isoform b [Homo sapiens]
          Length = 1042

 Score =  470 bits (1209), Expect = e-132
 Identities = 271/643 (42%), Positives = 377/643 (58%), Gaps = 58/643 (9%)

Query: 621  HVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS---EEEEEEEEEEQPQAA 677
            +V S ++     APK+ +     EM+P YE   ++D  +      ++ E      QP A 
Sbjct: 60   NVSSFQLKLAAKAPKSEK-----EMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQ 114

Query: 678  QPPTLPVEEKKKIPDPDSDD----VSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYA 733
            + PT P+  K   P    D+    +S  D RH     +Q+ D+E          L S   
Sbjct: 115  KSPTSPLNMKLGRPRIKKDEKQSLISAGDYRH--RRTEQEEDEE----------LLSESR 162

Query: 734  VAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793
                V  R +   + +  G L+ YQI+GL WL+SLY N +NGILADEMGLGKT+QTIAL+
Sbjct: 163  KTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALL 222

Query: 794  TYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV-PQLRSGK 852
             YL  ++ I GP +++VP STL NW  EF +W PS+  + + G   AR AF+  ++  G+
Sbjct: 223  GYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE 282

Query: 853  FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGT 912
            ++V +T+YE +IK+K +  K  W+Y+++DE HR+KN   KL++++   + +  RLLLTGT
Sbjct: 283  WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVR-EFKSTNRLLLTGT 341

Query: 913  PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL 972
            PLQN L ELWALLNFLLP +F S   F+ WF+    +  +K          ++ RLH VL
Sbjct: 342  PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQK----------LVERLHAVL 391

Query: 973  RPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT 1032
            +PFLLRR+K +VE  LP K E  I   +S +QR  Y       +L+ D    +  GK   
Sbjct: 392  KPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMDK 446

Query: 1033 KTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088
              L+N +MQLRK CNHPY+F   E     +  EH+               SGK  +LD++
Sbjct: 447  MRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHI------------VSNSGKMVVLDKL 494

Query: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148
            L KL+    +VL+F QMT L+ I+EDY  +RG++Y RLDG T  E+R   ++ FN P S 
Sbjct: 495  LAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNAPNSS 554

Query: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN 1208
             FIF+LSTRAGGLG+NL SAD VI++DSDWNP  DLQA DRAHRIGQ+  VRV RL T N
Sbjct: 555  KFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDN 614

Query: 1209 SVEEKILAAAKYKLNVDQKVIQAG-MFDQKSSSHERRAFLQAI 1250
            +VEE+I+  A+ KL +D  VIQ G + DQ+S+   +   LQ I
Sbjct: 615  TVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 657


>gi|21071044 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a1 isoform a [Homo sapiens]
          Length = 1054

 Score =  461 bits (1186), Expect = e-129
 Identities = 271/655 (41%), Positives = 377/655 (57%), Gaps = 70/655 (10%)

Query: 621  HVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS---EEEEEEEEEEQPQAA 677
            +V S ++     APK+ +     EM+P YE   ++D  +      ++ E      QP A 
Sbjct: 60   NVSSFQLKLAAKAPKSEK-----EMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQ 114

Query: 678  QPPTLPVEEKKKIPDPDSDD----VSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYA 733
            + PT P+  K   P    D+    +S  D RH     +Q+ D+E          L S   
Sbjct: 115  KSPTSPLNMKLGRPRIKKDEKQSLISAGDYRH--RRTEQEEDEE----------LLSESR 162

Query: 734  VAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793
                V  R +   + +  G L+ YQI+GL WL+SLY N +NGILADEMGLGKT+QTIAL+
Sbjct: 163  KTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALL 222

Query: 794  TYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV-PQLRSGK 852
             YL  ++ I GP +++VP STL NW  EF +W PS+  + + G   AR AF+  ++  G+
Sbjct: 223  GYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE 282

Query: 853  FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGT 912
            ++V +T+YE +IK+K +  K  W+Y+++DE HR+KN   KL++++   + +  RLLLTGT
Sbjct: 283  WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVR-EFKSTNRLLLTGT 341

Query: 913  PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL 972
            PLQN L ELWALLNFLLP +F S   F+ WF+    +  +K          ++ RLH VL
Sbjct: 342  PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQK----------LVERLHAVL 391

Query: 973  RPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT 1032
            +PFLLRR+K +VE  LP K E  I   +S +QR  Y       +L+ D    +  GK   
Sbjct: 392  KPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMDK 446

Query: 1033 KTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088
              L+N +MQLRK CNHPY+F   E     +  EH+               SGK  +LD++
Sbjct: 447  MRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHI------------VSNSGKMVVLDKL 494

Query: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRG------------ 1136
            L KL+    +VL+F QMT L+ I+EDY  +RG++Y RLDG T  E+R             
Sbjct: 495  LAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQR 554

Query: 1137 MLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ 1196
              ++ FN P S  FIF+LSTRAGGLG+NL SAD VI++DSDWNP  DLQA DRAHRIGQ+
Sbjct: 555  EAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQK 614

Query: 1197 NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG-MFDQKSSSHERRAFLQAI 1250
              VRV RL T N+VEE+I+  A+ KL +D  VIQ G + DQ+S+   +   LQ I
Sbjct: 615  KPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 669


>gi|21071058 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a5 [Homo sapiens]
          Length = 1052

 Score =  449 bits (1155), Expect = e-125
 Identities = 259/628 (41%), Positives = 363/628 (57%), Gaps = 45/628 (7%)

Query: 632  DAPKAGQLEAWLEMNPGYEVAPRSDSE---ESGSEEEEEEEEEEQPQAAQPPTLPVEEKK 688
            D    G+ +   E +P YE   ++D     E   ++ E      QP A + PT P++ K 
Sbjct: 63   DDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKP 122

Query: 689  KIPDPDSDD----VSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDK 744
              P    D+    +S  D RH     +Q+ D+E          L +  + A  V  R + 
Sbjct: 123  GRPRIKKDEKQNLLSVGDYRH--RRTEQEEDEE----------LLTESSKATNVCTRFED 170

Query: 745  QSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRING 804
              + +  G L+ YQ++GL WL+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I G
Sbjct: 171  SPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPG 230

Query: 805  PFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYI 863
            P +++VP STL NW  EF +W P++  V   G    R AFV   L  G+++V +T+YE +
Sbjct: 231  PHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEML 290

Query: 864  IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWA 923
            IK+K +  K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELW+
Sbjct: 291  IKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWS 349

Query: 924  LLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKE 983
            LLNFLLP +F S   F+ WF+    +  +K          ++ RLH VLRPFLLRR+K +
Sbjct: 350  LLNFLLPDVFNSADDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKAD 399

Query: 984  VEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLR 1043
            VE  LP K E  I   +S +QR  Y       +L+ D    +  GK     L+N +MQLR
Sbjct: 400  VEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKMDKMRLLNILMQLR 454

Query: 1044 KICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFC 1103
            K CNHPY+F   E                + L   SGK  +LD++LPKL+    +VL+F 
Sbjct: 455  KCCNHPYLFDGAEPG--------PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFS 506

Query: 1104 QMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGL 1163
            QMT ++ I+EDY  +R ++Y RLDG T  ++R   +  +NEP S  F+F+LSTRAGGLG+
Sbjct: 507  QMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGI 566

Query: 1164 NLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLN 1223
            NL +AD VI++DSDWNP  DLQA DRAHRIGQ   VRV R  T N+VEE+I+  A+ KL 
Sbjct: 567  NLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLR 626

Query: 1224 VDQKVIQAG-MFDQKSSSHERRAFLQAI 1250
            +D  VIQ G + DQ  +   +   LQ I
Sbjct: 627  LDSIVIQQGRLVDQNLNKIGKDEMLQMI 654


>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
            [Homo sapiens]
          Length = 1828

 Score =  412 bits (1059), Expect = e-114
 Identities = 294/835 (35%), Positives = 426/835 (51%), Gaps = 105/835 (12%)

Query: 754  LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813
            L+ YQ++GL WL   +  N + ILADEMGLGKTIQTI+ ++YL    ++ GPFLI+VPLS
Sbjct: 484  LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543

Query: 814  TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVP------QLRSGKFNVLLTTYEYIIKDK 867
            TL++W  EF+ WAP +  V Y G   +R           Q +  KFN L+TTYE ++KDK
Sbjct: 544  TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 603

Query: 868  HILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNF 927
             +L  I W ++ VDE HR+KN    L + L   + +  RLL+TGTPLQN L ELW+LL+F
Sbjct: 604  TVLGSINWAFLGVDEAHRLKNDDSLLYKTL-IDFKSNHRLLITGTPLQNSLKELWSLLHF 662

Query: 928  LLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQ 987
            ++P  F+    FE           E      E      + LHKVL PFLLRR+KK+VE  
Sbjct: 663  IMPEKFEFWEDFE-----------EDHGKGRENGY---QSLHKVLEPFLLRRVKKDVEKS 708

Query: 988  LPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICN 1047
            LP KVE +++ +MSALQ+  Y     K +L  +     K  +G T   +N +M+L+K CN
Sbjct: 709  LPAKVEQILRVEMSALQKQYY-----KWILTRNYKALAKGTRGSTSGFLNIVMELKKCCN 763

Query: 1048 HPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTS 1107
            H Y+ +  EE+  E+     G    L L R+SGK  LLD++L +LR   ++VL+F QM  
Sbjct: 764  HCYLIKPPEENEREN-----GQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVR 818

Query: 1108 LMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS 1167
            ++ I+ +Y   + + + RLDG+ K E R   L  FN  GSE F FLLSTRAGGLG+NL S
Sbjct: 819  MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 878

Query: 1168 ADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQK 1227
            ADTV+IFDSDWNP  DLQAQ RAHRIGQ+ +V + RL T  +VEE+I+  AK K+ +D  
Sbjct: 879  ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 938

Query: 1228 VIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEE 1287
            VIQ    D            + ILE+            SG ++                 
Sbjct: 939  VIQ--RMDTTG---------RTILEN-----------NSGRSN---------------SN 961

Query: 1288 PPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWI 1347
            P  KEE           +    E E      MD+D     A   + +      DEL S  
Sbjct: 962  PFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLS-- 1019

Query: 1348 IKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEE--EVR 1405
                 +V      E+EE++       R   D+ + + E+Q  K  EE   +E+EE   + 
Sbjct: 1020 ---QFKVANFATMEDEEEL-----EERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLP 1071

Query: 1406 QKKSSRKRKRDSDAGSST--------PTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPN 1457
            + +SS K+ + +D+ S T         + S    +  D+ KK K+RGRP + +       
Sbjct: 1072 RIRSSTKKAQTNDSDSDTESKRQAQRSSASESETEDSDDDKKPKRRGRPRSVRKDLVEGF 1131

Query: 1458 LTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPV-DFKKIKERIRN 1516
               ++++ + A  K+             + L   + +    EL+ K V D K++ E I N
Sbjct: 1132 TDAEIRRFIKAYKKFG------------LPLERLECIARDAELVDKSVADLKRLGELIHN 1179

Query: 1517 HKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSE 1571
                ++ + E+    L +NA      G      +I +  V  +V+  I+ E++ E
Sbjct: 1180 SCVSAMQEYEEQ---LKENASEGKGPGKR-RGPTIKISGVQVNVKSIIQHEEEFE 1230



 Score = 40.0 bits (92), Expect = 0.019
 Identities = 53/240 (22%), Positives = 104/240 (43%), Gaps = 25/240 (10%)

Query: 1404 VRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMK 1463
            +R K  S++      + +S+ + S  +   D  S+ + ++G  P         + ++  +
Sbjct: 2    MRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSE 61

Query: 1464 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1522
               ++    +  S+G +   V   LP  KE P   +   +  D KK+ E   + +  R  
Sbjct: 62   SQSES----ESESAGSKSQPV---LPEAKEKPASKK--ERIADVKKMWEEYPDVYGVRRS 112

Query: 1523 NDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVR--QKIEKEDDSEGEESEEEEE 1580
            N          Q    FN++     E S   +S     R  ++++K++  + E SE+E+E
Sbjct: 113  NRSR-------QEPSRFNIKE----EASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQE 161

Query: 1581 -GEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDR 1639
             G    SE E + VK +  + R+   + R+K  + +  RG R K   SD+D ++++   R
Sbjct: 162  QGTSAESEPEQKKVKARRPVPRRTVPKPRVK-KQPKTQRGKRKKQDSSDEDDDDDEAPKR 220



 Score = 37.0 bits (84), Expect = 0.16
 Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 21/179 (11%)

Query: 1287 EPPLKEEDEV----PDDETVNQMIARHEEEFDLFMRMDLDRRR-----EEARNPKRKPRL 1337
            +P LK  D++     D +   + +    +     +R  L+++      EEA+  KRKPR+
Sbjct: 1287 DPELKLTDKILPVETDKKPQGKQLQTRADYLLKLLRKGLEKKGAVTGGEEAKLKKRKPRV 1346

Query: 1338 MEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTL 1397
             +E+++P   +K++  +E  +    +           +E +  D   EK  +K  ++   
Sbjct: 1347 KKENKVPR--LKEEHGIELSSPRHSDNP--------SEEGEVKDDGLEKSPMK--KKQKK 1394

Query: 1398 EEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPP 1456
            +E +E   ++ SSRK K        +     + +  D +S  + KR + P    + + P
Sbjct: 1395 KENKENKEKQMSSRKDKEGDKERKKSKDKKEKPKSGDAKSSSKSKRSQGPVHITAGSEP 1453



 Score = 34.3 bits (77), Expect = 1.0
 Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 32/240 (13%)

Query: 473  QEYLNSILQHAKDFKEYHRSV-----TGKIQKLTKAVATYHANTEREQKKENERIEKERM 527
            Q  + SI+QH ++F+  H+S+       K   LT  V   H + E   + ++        
Sbjct: 1216 QVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDS-------- 1267

Query: 528  RRLMAEDEEGY---------------RKLIDQKKDKR-LAYLLQQTDEYVANLTELVRQH 571
            R L+   E GY                K++  + DK+     LQ   +Y+  L     + 
Sbjct: 1268 RLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKLLRKGLEK 1327

Query: 572  KAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGT 631
            K A    E+ K KK+K     E + P +  +      + + SD P +   V+   +    
Sbjct: 1328 KGAVTGGEEAKLKKRKPRVKKENKVPRLKEEHGIELSSPRHSDNPSEEGEVKDDGLEKSP 1387

Query: 632  DAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIP 691
               K  + E   + N   +++ R D +E   E ++ ++++E+P++    +    ++ + P
Sbjct: 1388 MKKKQKKKEN--KENKEKQMSSRKD-KEGDKERKKSKDKKEKPKSGDAKSSSKSKRSQGP 1444



 Score = 33.9 bits (76), Expect = 1.3
 Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 1546 IYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKA 1605
            + +D +    +    ++K  KE+  +   S +++EG++E  +S+ +  K K     K  +
Sbjct: 1378 VKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPK-SGDAKSSS 1436

Query: 1606 QDRLKGGRRRPSRGSRAKPVVSDDDSEEEQE 1636
            + +   G    + GS   P+  D+D + +QE
Sbjct: 1437 KSKRSQGPVHITAGSEPVPIGEDEDDDLDQE 1467


>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
            sapiens]
          Length = 1710

 Score =  396 bits (1017), Expect = e-109
 Identities = 264/716 (36%), Positives = 363/716 (50%), Gaps = 104/716 (14%)

Query: 754  LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813
            L+ YQ+ GL WL   +    + ILADEMGLGKTIQTI+ + YL    ++ GPFL++VPLS
Sbjct: 481  LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 540

Query: 814  TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVP------QLRSGKFNVLLTTYEYIIKDK 867
            TL++W  E   WA  +  V Y G   +R           Q +  KFN+LLTTYE ++KDK
Sbjct: 541  TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK 600

Query: 868  HILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNF 927
              L  + W ++ VDE HR+KN    L + L   + +  RLL+TGTPLQN L ELW+LL+F
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTL-IDFKSNHRLLITGTPLQNSLKELWSLLHF 659

Query: 928  LLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQ 987
            ++P  F S   FE+         G +              LHK L PFLLRR+KK+VE  
Sbjct: 660  IMPEKFSSWEDFEEEHGK-----GREYGYAS---------LHKELEPFLLRRVKKDVEKS 705

Query: 988  LPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICN 1047
            LP KVE +++ +MSALQ+  Y     K +L  +     K  KG T   +N +M+L+K CN
Sbjct: 706  LPAKVEQILRMEMSALQKQYY-----KWILTRNYKALSKGSKGSTSGFLNIMMELKKCCN 760

Query: 1048 HPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTS 1107
            H Y+ +  + +      F         L R+SGK  LLD++L +LR   ++VL+F QM  
Sbjct: 761  HCYLIKPPDNN-----EFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVR 815

Query: 1108 LMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS 1167
            ++ I+ +Y  YR F + RLDG+ K E R   L  FN  GSE F FLLSTRAGGLG+NL S
Sbjct: 816  MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 875

Query: 1168 ADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQK 1227
            ADTV+IFDSDWNP  DLQAQ RAHRIGQ+ +V + RL T  SVEE IL  AK K+ +D  
Sbjct: 876  ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 935

Query: 1228 VIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEE 1287
            VIQ                             R  +TG    +  HT   P+   P    
Sbjct: 936  VIQ-----------------------------RMDTTGK---TVLHTGSAPSSSTP---- 959

Query: 1288 PPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWI 1347
                                 ++EE    ++   +   +E    +++P+ M+ DE+    
Sbjct: 960  --------------------FNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRA 999

Query: 1348 IKDDAEVERLTCEEE---EEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEV 1404
               + E   LT  +E   + K+    +    +++       K W + I E     +EEE 
Sbjct: 1000 ETHENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEE 1059

Query: 1405 RQKKSS------RKR---KRDSDAGSSTPTTSTR-----SRDKDDESKKQKKRGRP 1446
            RQK+        R R   K+ S  GS    + +R       D   E K+ KKRGRP
Sbjct: 1060 RQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRP 1115



 Score = 37.4 bits (85), Expect = 0.12
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 67/245 (27%)

Query: 1409 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1468
            SS+    DSD+GS +    ++S  + D S++ K + +PP                  VD 
Sbjct: 44   SSQSGSSDSDSGSES---GSQSESESDTSRENKVQAKPPK-----------------VDG 83

Query: 1469 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1528
               +K S S                       +++    KK +++ +  ++++ ++   +
Sbjct: 84   AEFWKSSPS--------------------ILAVQRSAILKKQQQQQQQQQHQASSNSGSE 123

Query: 1529 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD----------SEGEESEEE 1578
                         E S   EDS       + V++K  K++D            G +SE E
Sbjct: 124  -------------EDSSSSEDS---DDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESE 167

Query: 1579 EEGEEEGSESESRSVKVKIKL-GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEE 1637
            EE E+   +      + K K+  RK + + + K G++   +  R      +DD EE+ + 
Sbjct: 168  EEREKSSCDETESDYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEDDDEEDYDN 227

Query: 1638 DRSGS 1642
            D+  S
Sbjct: 228  DKRSS 232



 Score = 33.1 bits (74), Expect = 2.3
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 1561 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1620
            +Q+ +++  +      EE+    E S+  S  VK K     K K +D    G   PS+  
Sbjct: 107  QQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVKRK-----KHKDEDWQMSGSGSPSQ-- 159

Query: 1621 RAKPVVSDDDSEEEQEEDRSGSGSEE 1646
                  S  DSE E+E ++S     E
Sbjct: 160  ------SGSDSESEEEREKSSCDETE 179



 Score = 31.6 bits (70), Expect = 6.6
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 1567 EDDSEGEESEEEEEGEEEGSESESRS-VKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPV 1625
            +  S    S + + G E GS+SES S    + K+  K    D  +  +  PS  +  +  
Sbjct: 41   DGSSSQSGSSDSDSGSESGSQSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSA 100

Query: 1626 VSDDDSEEEQEEDR---SGSGSEED 1647
            +     +++Q++     S SGSEED
Sbjct: 101  ILKKQQQQQQQQQHQASSNSGSEED 125


>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
            sapiens]
          Length = 1954

 Score =  394 bits (1012), Expect = e-109
 Identities = 267/782 (34%), Positives = 401/782 (51%), Gaps = 110/782 (14%)

Query: 739  TERVDKQSALM--VNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796
            T + DKQ   +    G L  YQ++GL WL   +    + ILADEMGLGKT+QTI  +  L
Sbjct: 683  TVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSL 742

Query: 797  MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--------L 848
             +     GP+L+  PLST+ NW  EF+ WAP    V+Y G   +R              +
Sbjct: 743  YKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAI 802

Query: 849  RSGK------------FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
            RSGK            F+VLLT+YE I  D+ IL  I W  ++VDE HR+KN+  K  +V
Sbjct: 803  RSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRV 862

Query: 897  LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
            LN+ Y    +LLLTGTPLQN L EL+ LLNFL P  F +   F + F           D+
Sbjct: 863  LNS-YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADI 911

Query: 957  NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGV 1016
            ++E+ I   ++LH +L P +LRRLK +V   +P K E +++ ++S +Q+  Y     K +
Sbjct: 912  SKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY-----KFI 963

Query: 1017 LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLY 1076
            L  +    + KG G   +L+N +M L+K CNHPY+F     +  E      G   G  L 
Sbjct: 964  LTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFP---VAAVEAPVLPNGSYDGSSLV 1020

Query: 1077 RASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRG 1136
            ++SGK  LL ++L KLR   H+VL+F QMT ++ ++ED+  Y G+KY R+DG      R 
Sbjct: 1021 KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ 1080

Query: 1137 MLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ 1196
              +  FN PG++ F FLLSTRAGGLG+NL +ADTVII+DSDWNPH D+QA  RAHRIGQ 
Sbjct: 1081 EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN 1140

Query: 1197 NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ 1256
             +V + R  T  SVEE+I   AK K+ +   V++ G+  +  S  ++   L  IL+   +
Sbjct: 1141 KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQE--LDDILKFGTE 1198

Query: 1257 D-----------------------ESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEE 1293
            +                       +S      + SA   H + PP G N D+E+  +   
Sbjct: 1199 ELFKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPP-GDNKDVEDSSVIHY 1257

Query: 1294 DEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEE----DELPSWIIK 1349
                DD  +++++ R+++  D     +L    E   + K    ++ E    +E+   IIK
Sbjct: 1258 ----DDAAISKLLDRNQDATD---DTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIK 1310

Query: 1350 DDAEVE--------RLTCEEEEEKM---FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE 1398
             +  V+        R   E+++E +    G+G R RK+V+Y+D+  E Q           
Sbjct: 1311 QEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQ----------- 1359

Query: 1399 EIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNL 1458
            E ++E+   +S      +   GS         R +    ++Q +R +  +++  P PP L
Sbjct: 1360 EWQDELSDNQS------EYSIGSEDEDEDFEERPEGQSGRRQSRR-QLKSDRDKPLPPLL 1412

Query: 1459 TK 1460
             +
Sbjct: 1413 AR 1414



 Score = 32.3 bits (72), Expect = 3.9
 Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 35/180 (19%)

Query: 1269 ASFAHTAPPPAGVNPDLEEPPLKEEDEV-PDDETVNQMIARHEEEFDLFMRMDLDRRREE 1327
            AS AH  P P G+ PD  E  L   DE  P  +   Q +                   E 
Sbjct: 1553 ASPAHLLPAPLGL-PDKMEAQLGYMDEKDPGAQKPRQPL-------------------EV 1592

Query: 1328 ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQ 1387
               P    R+  ED+  S   K+ A  ER    EE EK         +++   + L EK+
Sbjct: 1593 QALPAALDRVESEDKHESPASKERAREER---PEETEK----APPSPEQLPREEVLPEKE 1645

Query: 1388 WLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDK--DDESKKQKKRGR 1445
              K +++  L  I     +  SS  R  D+ A    P  + ++ DK  DDE KK+ K+G+
Sbjct: 1646 --KILDKLELSLIHS---RGDSSELRPDDTKAEEKEPIETQQNGDKEEDDEGKKEDKKGK 1700


>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
            [Homo sapiens]
          Length = 2000

 Score =  393 bits (1009), Expect = e-109
 Identities = 307/981 (31%), Positives = 462/981 (47%), Gaps = 137/981 (13%)

Query: 752  GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811
            G L  YQ++GL WL   +    + ILADEMGLGKTIQTI  +  L +     GPFL+  P
Sbjct: 734  GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793

Query: 812  LSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-------------------RAFVPQLRSG- 851
            LST+ NW  EF  WAP    V+Y G   +R                   +AF  +  +  
Sbjct: 794  LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853

Query: 852  KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
            KF+VLLT+YE I  D+  L  IRW  ++VDE HR+KN+  K  +VLN  Y    +LLLTG
Sbjct: 854  KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNG-YKIDHKLLLTG 912

Query: 912  TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
            TPLQN L EL+ LLNFL P  F +   F + F           D+++E+ I   ++LH +
Sbjct: 913  TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 959

Query: 972  LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
            L P +LRRLK +V   +P K E +++ ++S +Q+  Y++     +L  +    + +G G 
Sbjct: 960  LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKY-----ILTRNFEALNSRGGGN 1014

Query: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
              +L+N +M L+K CNHPY+F     +  E      G  +G  L ++SGK  LL ++L K
Sbjct: 1015 QVSLLNIMMDLKKCCNHPYLFP---VAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1071

Query: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
            L+   H+VL+F QMT ++ ++ED+  Y G+KY R+DG      R   +  FN PG++ F 
Sbjct: 1072 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1131

Query: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
            FLLSTRAGGLG+NL +ADTVIIFDSDWNPH D+QA  RAHRIGQ N+V + R  T  SVE
Sbjct: 1132 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1191

Query: 1212 EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF 1271
            E+I   AK K+ +   V++ G+  +  S  ++   L  IL+   ++              
Sbjct: 1192 ERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQE--LDDILKFGTEE-------------- 1235

Query: 1272 AHTAPPPAGVNPDLEEPPLKEEDEVP---DDETVNQMIARHEEEFDLFMRMDLDRRREEA 1328
                     +  D  E   KEED      D+E + +++ R++   D     D+    E  
Sbjct: 1236 ---------LFKDENEGENKEEDSSVIHYDNEAIARLLDRNQ---DATEDTDVQNMNEYL 1283

Query: 1329 RNPKRKPRLMEE----DELPSWIIKDDAEVE--------RLTCEEEEEKM---FGRGSRH 1373
             + K    ++ E    +E+   IIK +  V+        R   E+++E +    G+G R 
Sbjct: 1284 SSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRV 1343

Query: 1374 RKEVDYSDSLTEKQWLKA-------IEEGTLEEIEEEVRQKKSSRKRKRD-------SDA 1419
            RK+V+Y+D+  E Q  ++        E+   +E  E  RQ K   + ++D       +  
Sbjct: 1344 RKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1403

Query: 1420 GSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPN------PPNLTKKMKKIVDAVIKYK 1473
            G +       +R +        + G PP +  +             K+ K  V   +++ 
Sbjct: 1404 GGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQWLVRDLRGKTEKEFKAYVSLFMRHL 1463

Query: 1474 DSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF---KKIKERIRNHKYRSLNDLEKDVM 1530
                G   SE F     R+ L     L R  V     KK++E    +   S+ +L  D  
Sbjct: 1464 -CEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPS 1522

Query: 1531 LLCQNAQTFN--LEGSLIYEDSIVLQSVFTS-------------VRQKIEKEDDSEGEES 1575
               + +   +   + S    ++    S  TS             +R  +EKE+    EE 
Sbjct: 1523 ADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEK 1582

Query: 1576 EEEEEGEEEGSESESRSVKVKIKLG-----RKEKAQDRLKG--GRRRPS---RGSRAKPV 1625
             E+     E  E+E+ +      LG     RK   +D + G  G   P    RG R K  
Sbjct: 1583 PEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDEVPGVPGEMEPEPGYRGDREKSA 1642

Query: 1626 VSDDDSEEEQEEDRSGSGSEE 1646
                  E  +E+   G    E
Sbjct: 1643 TESTPGERGEEKPLDGQEHRE 1663



 Score = 38.5 bits (88), Expect = 0.054
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 511  TEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQ 570
            TE   K ENE   KE    ++  D E   +L+D+ +D       + TD  V N+ E +  
Sbjct: 1233 TEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQD-----ATEDTD--VQNMNEYLSS 1285

Query: 571  HKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD-GEPLDETSQMSDLPVKVIHVESGKILT 629
             K AQ    ++ K ++ + E  + Q   + PD  E L              H E  +   
Sbjct: 1286 FKVAQYVVREEDKIEEIEREIIK-QEENVDPDYWEKLLRH-----------HYEQQQEDL 1333

Query: 630  GTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKK 689
              +  K  ++   +  N   +    + SE S   EEE+E+ +E+P+  +     +  +K 
Sbjct: 1334 ARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKD 1393

Query: 690  IPDP 693
             P P
Sbjct: 1394 KPLP 1397



 Score = 32.0 bits (71), Expect = 5.1
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 15/117 (12%)

Query: 585  KKKKAENAEGQTPAIGPDGEPLD-ETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWL 643
            +K++AEN E +       GE ++ E    S  P     +E  KI    + P    +   +
Sbjct: 1572 EKEEAENQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDEVPG---VPGEM 1628

Query: 644  EMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700
            E  PGY    R D E+S +E    E  EE+P       L  +E ++ P+ ++ D+ +
Sbjct: 1629 EPEPGY----RGDREKSATESTPGERGEEKP-------LDGQEHRERPEGETGDLGK 1674


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
            [Homo sapiens]
          Length = 2059

 Score =  393 bits (1009), Expect = e-109
 Identities = 307/981 (31%), Positives = 462/981 (47%), Gaps = 137/981 (13%)

Query: 752  GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811
            G L  YQ++GL WL   +    + ILADEMGLGKTIQTI  +  L +     GPFL+  P
Sbjct: 793  GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 852

Query: 812  LSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-------------------RAFVPQLRSG- 851
            LST+ NW  EF  WAP    V+Y G   +R                   +AF  +  +  
Sbjct: 853  LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 912

Query: 852  KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
            KF+VLLT+YE I  D+  L  IRW  ++VDE HR+KN+  K  +VLN  Y    +LLLTG
Sbjct: 913  KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNG-YKIDHKLLLTG 971

Query: 912  TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
            TPLQN L EL+ LLNFL P  F +   F + F           D+++E+ I   ++LH +
Sbjct: 972  TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 1018

Query: 972  LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
            L P +LRRLK +V   +P K E +++ ++S +Q+  Y++     +L  +    + +G G 
Sbjct: 1019 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKY-----ILTRNFEALNSRGGGN 1073

Query: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
              +L+N +M L+K CNHPY+F     +  E      G  +G  L ++SGK  LL ++L K
Sbjct: 1074 QVSLLNIMMDLKKCCNHPYLFP---VAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1130

Query: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
            L+   H+VL+F QMT ++ ++ED+  Y G+KY R+DG      R   +  FN PG++ F 
Sbjct: 1131 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1190

Query: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
            FLLSTRAGGLG+NL +ADTVIIFDSDWNPH D+QA  RAHRIGQ N+V + R  T  SVE
Sbjct: 1191 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1250

Query: 1212 EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF 1271
            E+I   AK K+ +   V++ G+  +  S  ++   L  IL+   ++              
Sbjct: 1251 ERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQE--LDDILKFGTEE-------------- 1294

Query: 1272 AHTAPPPAGVNPDLEEPPLKEEDEVP---DDETVNQMIARHEEEFDLFMRMDLDRRREEA 1328
                     +  D  E   KEED      D+E + +++ R++   D     D+    E  
Sbjct: 1295 ---------LFKDENEGENKEEDSSVIHYDNEAIARLLDRNQ---DATEDTDVQNMNEYL 1342

Query: 1329 RNPKRKPRLMEE----DELPSWIIKDDAEVE--------RLTCEEEEEKM---FGRGSRH 1373
             + K    ++ E    +E+   IIK +  V+        R   E+++E +    G+G R 
Sbjct: 1343 SSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRV 1402

Query: 1374 RKEVDYSDSLTEKQWLKA-------IEEGTLEEIEEEVRQKKSSRKRKRD-------SDA 1419
            RK+V+Y+D+  E Q  ++        E+   +E  E  RQ K   + ++D       +  
Sbjct: 1403 RKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1462

Query: 1420 GSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPN------PPNLTKKMKKIVDAVIKYK 1473
            G +       +R +        + G PP +  +             K+ K  V   +++ 
Sbjct: 1463 GGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQWLVRDLRGKTEKEFKAYVSLFMRHL 1522

Query: 1474 DSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF---KKIKERIRNHKYRSLNDLEKDVM 1530
                G   SE F     R+ L     L R  V     KK++E    +   S+ +L  D  
Sbjct: 1523 -CEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPS 1581

Query: 1531 LLCQNAQTFN--LEGSLIYEDSIVLQSVFTS-------------VRQKIEKEDDSEGEES 1575
               + +   +   + S    ++    S  TS             +R  +EKE+    EE 
Sbjct: 1582 ADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEK 1641

Query: 1576 EEEEEGEEEGSESESRSVKVKIKLG-----RKEKAQDRLKG--GRRRPS---RGSRAKPV 1625
             E+     E  E+E+ +      LG     RK   +D + G  G   P    RG R K  
Sbjct: 1642 PEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDEVPGVPGEMEPEPGYRGDREKSA 1701

Query: 1626 VSDDDSEEEQEEDRSGSGSEE 1646
                  E  +E+   G    E
Sbjct: 1702 TESTPGERGEEKPLDGQEHRE 1722



 Score = 38.5 bits (88), Expect = 0.054
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 511  TEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQ 570
            TE   K ENE   KE    ++  D E   +L+D+ +D       + TD  V N+ E +  
Sbjct: 1292 TEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQD-----ATEDTD--VQNMNEYLSS 1344

Query: 571  HKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD-GEPLDETSQMSDLPVKVIHVESGKILT 629
             K AQ    ++ K ++ + E  + Q   + PD  E L              H E  +   
Sbjct: 1345 FKVAQYVVREEDKIEEIEREIIK-QEENVDPDYWEKLLRH-----------HYEQQQEDL 1392

Query: 630  GTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKK 689
              +  K  ++   +  N   +    + SE S   EEE+E+ +E+P+  +     +  +K 
Sbjct: 1393 ARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKD 1452

Query: 690  IPDP 693
             P P
Sbjct: 1453 KPLP 1456



 Score = 33.9 bits (76), Expect = 1.3
 Identities = 16/30 (53%), Positives = 20/30 (66%)

Query: 1565 EKEDDSEGEESEEEEEGEEEGSESESRSVK 1594
            E+E++ E   SEEEEE EEEG E E   V+
Sbjct: 8    EEEEEEEMVVSEEEEEEEEEGDEEEEEEVE 37



 Score = 32.0 bits (71), Expect = 5.1
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 15/117 (12%)

Query: 585  KKKKAENAEGQTPAIGPDGEPLD-ETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWL 643
            +K++AEN E +       GE ++ E    S  P     +E  KI    + P    +   +
Sbjct: 1631 EKEEAENQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDEVPG---VPGEM 1687

Query: 644  EMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700
            E  PGY    R D E+S +E    E  EE+P       L  +E ++ P+ ++ D+ +
Sbjct: 1688 EPEPGY----RGDREKSATESTPGERGEEKP-------LDGQEHRERPEGETGDLGK 1733


>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
            [Homo sapiens]
          Length = 1966

 Score =  392 bits (1006), Expect = e-108
 Identities = 308/984 (31%), Positives = 465/984 (47%), Gaps = 140/984 (14%)

Query: 752  GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811
            G L  YQ++GL WL   +    + ILADEMGLGKTIQTI  +  L +     GPFL+  P
Sbjct: 734  GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793

Query: 812  LSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-------------------RAFVPQLRSG- 851
            LST+ NW  EF  WAP    V+Y G   +R                   +AF  +  +  
Sbjct: 794  LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853

Query: 852  KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
            KF+VLLT+YE I  D+  L  IRW  ++VDE HR+KN+  K  +VLN  Y    +LLLTG
Sbjct: 854  KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNG-YKIDHKLLLTG 912

Query: 912  TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
            TPLQN L EL+ LLNFL P  F +   F + F           D+++E+ I   ++LH +
Sbjct: 913  TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 959

Query: 972  LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
            L P +LRRLK +V   +P K E +++ ++S +Q+  Y++     +L  +    + +G G 
Sbjct: 960  LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKY-----ILTRNFEALNSRGGGN 1014

Query: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
              +L+N +M L+K CNHPY+F     +  E      G  +G  L ++SGK  LL ++L K
Sbjct: 1015 QVSLLNIMMDLKKCCNHPYLFP---VAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1071

Query: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
            L+   H+VL+F QMT ++ ++ED+  Y G+KY R+DG      R   +  FN PG++ F 
Sbjct: 1072 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1131

Query: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
            FLLSTRAGGLG+NL +ADTVIIFDSDWNPH D+QA  RAHRIGQ N+V + R  T  SVE
Sbjct: 1132 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1191

Query: 1212 EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF 1271
            E+I   AK K+ +   V++ G+  +  S  ++   L  IL+   ++              
Sbjct: 1192 ERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQE--LDDILKFGTEE-------------- 1235

Query: 1272 AHTAPPPAGVNPDLEEPPLKEEDEVP---DDETVNQMIARHEEEFDLFMRMDLDRRREEA 1328
                     +  D  E   KEED      D+E + +++ R++   D     D+    E  
Sbjct: 1236 ---------LFKDENEGENKEEDSSVIHYDNEAIARLLDRNQ---DATEDTDVQNMNEYL 1283

Query: 1329 RNPKRKPRLMEE----DELPSWIIKDDAEVE--------RLTCEEEEEKM---FGRGSRH 1373
             + K    ++ E    +E+   IIK +  V+        R   E+++E +    G+G R 
Sbjct: 1284 SSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRV 1343

Query: 1374 RKEVDYSDSLTEKQWLKA-------IEEGTLEEIEEEVRQKKSSRKRKRD-------SDA 1419
            RK+V+Y+D+  E Q  ++        E+   +E  E  RQ K   + ++D       +  
Sbjct: 1344 RKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1403

Query: 1420 GSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPN------PPNLTKKMKKIVDAVIKYK 1473
            G +       +R +        + G PP +  +             K+ K  V   +++ 
Sbjct: 1404 GGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQWLVRDLRGKTEKEFKAYVSLFMRHL 1463

Query: 1474 DSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF---KKIKERIRNHKYRSLNDLEKDVM 1530
                G   SE F     R+ L     L R  V     KK++E    +   S+ +L  D  
Sbjct: 1464 -CEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPS 1522

Query: 1531 LLCQNAQTFN--LEGSLIYEDSIVLQSVFTS-------------VRQKIEKEDDSEGEES 1575
               + +   +   + S    ++    S  TS             +R  +EKE+    EE 
Sbjct: 1523 ADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEK 1582

Query: 1576 EEEEEGEEEGSESESRSVKVKIKLG-----RKEKAQDRLKG--GRRRPSRGSRAKPVVSD 1628
             E+     E  E+E+ +      LG     RK   +D + G  G   P  G R     S+
Sbjct: 1583 PEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDEVPGVPGEMEPEPGYRGDREKSE 1642

Query: 1629 DDSEEEQ------EEDRSGSGSEE 1646
            D   + +      +E RS    EE
Sbjct: 1643 DVKGDRELRPGPRDEPRSNGRREE 1666



 Score = 38.5 bits (88), Expect = 0.054
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 511  TEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQ 570
            TE   K ENE   KE    ++  D E   +L+D+ +D       + TD  V N+ E +  
Sbjct: 1233 TEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQD-----ATEDTD--VQNMNEYLSS 1285

Query: 571  HKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD-GEPLDETSQMSDLPVKVIHVESGKILT 629
             K AQ    ++ K ++ + E  + Q   + PD  E L              H E  +   
Sbjct: 1286 FKVAQYVVREEDKIEEIEREIIK-QEENVDPDYWEKLLRH-----------HYEQQQEDL 1333

Query: 630  GTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKK 689
              +  K  ++   +  N   +    + SE S   EEE+E+ +E+P+  +     +  +K 
Sbjct: 1334 ARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKD 1393

Query: 690  IPDP 693
             P P
Sbjct: 1394 KPLP 1397


>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
            sapiens]
          Length = 1912

 Score =  390 bits (1003), Expect = e-108
 Identities = 251/722 (34%), Positives = 381/722 (52%), Gaps = 82/722 (11%)

Query: 752  GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811
            G L  YQ++GL WL   +    + ILADEMGLGKT+QT   +  L +     GPFL+  P
Sbjct: 724  GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783

Query: 812  LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--------LRSGK----------- 852
            LST+ NW  EF+ WAP +  V+Y G   +R              +R GK           
Sbjct: 784  LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843

Query: 853  -FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
             F+VLLT+YE I  D  IL  I W  +IVDE HR+KN+  K  +VLN  Y    +LLLTG
Sbjct: 844  KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNG-YSLQHKLLLTG 902

Query: 912  TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
            TPLQN L EL+ LLNFL P  F +   F + F           D+ +E+ I   ++LH +
Sbjct: 903  TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF----------ADIAKEDQI---KKLHDM 949

Query: 972  LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
            L P +LRRLK +V   +P K E +++ ++S +Q+  Y++     +L  +    + +G G 
Sbjct: 950  LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKY-----ILTRNFEALNARGGGN 1004

Query: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
              +L+N +M L+K CNHPY+F     +  E      G+  G  L RASGK  LL ++L  
Sbjct: 1005 QVSLLNVVMDLKKCCNHPYLFP---VAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKN 1061

Query: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
            L+   H+VL+F QMT ++ ++ED+  + G+KY R+DG      R   +  FN PG++ F 
Sbjct: 1062 LKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFC 1121

Query: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
            FLLSTRAGGLG+NL +ADTVII+DSDWNPH D+QA  RAHRIGQ  +V + R  T  SVE
Sbjct: 1122 FLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVE 1181

Query: 1212 EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF 1271
            E+I   AK K+ +   V++ G+  +  S  ++   L  IL+   ++  +  +T  G    
Sbjct: 1182 ERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQE--LDDILKFGTEELFKDEATDGG---- 1235

Query: 1272 AHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREE---A 1328
                    G N + E+  +       DD+ + +++ R+++E +      ++        A
Sbjct: 1236 --------GDNKEGEDSSVIHY----DDKAIERLLDRNQDETEDTELQGMNEYLSSFKVA 1283

Query: 1329 RNPKRKPRLMEEDELPSWIIKDDAEVE--------RLTCEEEEEKM---FGRGSRHRKEV 1377
            +   R+  + EE+E+   IIK +  V+        R   E+++E +    G+G R RK+V
Sbjct: 1284 QYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQV 1343

Query: 1378 DYSD-SLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDE 1436
            +Y+D S  ++ W         ++ + +     +S +   D D  S  P   +R   ++D+
Sbjct: 1344 NYNDGSQEDRDWQD-------DQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKGLRNDK 1396

Query: 1437 SK 1438
             K
Sbjct: 1397 DK 1398



 Score = 33.9 bits (76), Expect = 1.3
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 5/127 (3%)

Query: 650 EVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIEN 709
           EVA RSDSE S     ++++++  P+  +      +E+++  D D D      +  ++E+
Sbjct: 98  EVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLED 157

Query: 710 -AKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSL 768
              +D+D  +  S+   R L +Y A +  V   +  ++  +   V K   + G +W    
Sbjct: 158 WGMEDIDHVF--SEEDYRTLTNYKAFSQFVRPLIAAKNPKI--AVSKMMMVLGAKWREFS 213

Query: 769 YNNNLNG 775
            NN   G
Sbjct: 214 TNNPFKG 220


>gi|21914927 helicase, lymphoid-specific [Homo sapiens]
          Length = 838

 Score =  382 bits (982), Expect = e-105
 Identities = 267/801 (33%), Positives = 405/801 (50%), Gaps = 129/801 (16%)

Query: 497  IQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQ 556
            +++L  AV T  A  E E++ E   +E+ER  +++ +    + +   + + +RL +LL++
Sbjct: 18   VEQLDTAVIT-PAMLEEEEQLEAAGLERER--KMLEKARMSWDRESTEIRYRRLQHLLEK 74

Query: 557  TDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLP 616
            ++ Y   L   + Q    Q+ ++KKK+K ++K E+                         
Sbjct: 75   SNIYSKFLLTKMEQQ---QLEEQKKKEKLERKKES------------------------- 106

Query: 617  VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQA 676
               + V+ GK        K    +     +  Y ++     EE  S  ++ ++E E   +
Sbjct: 107  ---LKVKKGKNSIDASEEKPVMRKKRGREDESYNISEVMSKEEILSVAKKNKKENEDENS 163

Query: 677  AQPPTLPVEEKKKIPDPDS---DDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYA 733
            +    L VE+ +K  D +S   D +SE     + +N K   D                  
Sbjct: 164  SST-NLCVEDLQKNKDSNSIIKDRLSET----VRQNTKFFFDP----------------- 201

Query: 734  VAHAVTERVD-KQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL 792
            V     + V  +Q      GV++ YQ++G+EWL  L+ N +NGILADEMGLGKT+Q IA 
Sbjct: 202  VRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIAT 261

Query: 793  ITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQL--RS 850
            I  LM  + + GPFL+  PLSTL NW  EF ++ P +  + Y G+   R+  V  +  R 
Sbjct: 262  IA-LMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRK 320

Query: 851  GKFN---VLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL 907
            G      V++T++E  ++D++ L    WKY+IVDEGHR+KN  C+L + L   + A  +L
Sbjct: 321  GTLQIHPVVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELK-RFNADNKL 379

Query: 908  LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFN-APFAMTGEKVDLNEEETILIIR 966
            LLTGTPLQN L ELW+LLNFLLP +F    +FE WF+    + T E +   E E   ++ 
Sbjct: 380  LLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQ-NVLH 438

Query: 967  RLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDK 1026
             LH++L PFLLRRLK +V  ++P K E V+   +S  Q + Y  +  + +    GS + +
Sbjct: 439  MLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKE 498

Query: 1027 --------KGKGGTKTLMN----------------------------------------- 1037
                    + K  T+  +N                                         
Sbjct: 499  TIELSPTGRPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNL 558

Query: 1038 ----TIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLR 1093
                 +M LRK CNHPY+ ++  +  ++       +V        SGKF +LDR+LP+L+
Sbjct: 559  KLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELK 612

Query: 1094 ATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFL 1153
               HKVLLF QMTS++ I+ DY   R F + RLDG+    +R   + +FN    E FIFL
Sbjct: 613  KRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFN-TDPEVFIFL 671

Query: 1154 LSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEK 1213
            +STRAGGLG+NL +ADTVII+DSDWNP  DLQAQDR HRIGQ   V V RL T N++++K
Sbjct: 672  VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731

Query: 1214 ILAAAKYKLNVDQKVIQAGMF 1234
            I+  A  K  +++ +I    F
Sbjct: 732  IVERAAAKRKLEKLIIHKNHF 752


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
            sapiens]
          Length = 2997

 Score =  367 bits (943), Expect = e-101
 Identities = 214/498 (42%), Positives = 300/498 (60%), Gaps = 38/498 (7%)

Query: 751  NGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIV 810
            N  L++YQ++G+ WL+  + N  N ILADEMGLGKTIQ+I  + Y +  K I+GPFL+I 
Sbjct: 965  NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1023

Query: 811  PLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV--------PQLR----SGKFNVLLT 858
            PLST+ NW  EF  W    V V Y GS A+RR           PQ R    S KF+ ++T
Sbjct: 1024 PLSTIPNWEREFRTWTELNVVV-YHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1082

Query: 859  TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 918
            T+E I+ D   L  I W+ +++DE HR+KN +CKL + L    +   ++LLTGTPLQN +
Sbjct: 1083 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1141

Query: 919  PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR 978
             EL++LL+FL P+ F S +TF Q F           DL  EE +   ++L  +L+P +LR
Sbjct: 1142 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1188

Query: 979  RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMN 1037
            RLK++VE  L  K E +I+ +++ +Q+  YR +  K    L+ G      G+     L+N
Sbjct: 1189 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG-----GQANVPNLLN 1243

Query: 1038 TIMQLRKICNHPYMFQHIEESFSEHLGFTGGI----VQGLDLYRASGKFELLDRILPKLR 1093
            T+M+LRK CNHPY+    EE   E    T        Q   + +A+GK  L+D++LPKL+
Sbjct: 1244 TMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLK 1303

Query: 1094 ATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFL 1153
            A  H+VL+F QM   + I+EDY   R + Y R+DG  +   R   +  F++P S+ F+FL
Sbjct: 1304 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1363

Query: 1154 LSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEK 1213
            L TRAGGLG+NL +ADT IIFDSDWNP  DLQAQ R HRIGQ   V++ RL T NS E +
Sbjct: 1364 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1423

Query: 1214 ILAAAKYKLNVDQKVIQA 1231
            +   A  KL +D+ V+Q+
Sbjct: 1424 MFDKASLKLGLDKAVLQS 1441



 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 82/336 (24%), Positives = 116/336 (34%), Gaps = 53/336 (15%)

Query: 48  GPPSAGHPIPTQGPGGYP--QDNMHQMHK-PMESMHEKGMSDDPRYNQMKGMGMRSGGHA 104
           GP    H +P Q P   P  + ++ Q H  P  ++H + ++  PR++             
Sbjct: 231 GPGHLSH-VPQQSPSMAPSLRHSVQQFHHHPSTALHGESVAHSPRFSPNPPQ------QG 283

Query: 105 GMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ 164
            + P        SQ  PSP   +    S  P S  + G   ++G           Q LG 
Sbjct: 284 AVRPQTLNFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMN---------QNLGL 334

Query: 165 QNRGPTPFNQNQLHQLRA---QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP 221
            N   TP NQ+      A      + + L   QP+     +     + M   Q Q     
Sbjct: 335 TNN--TPMNQSVPRYPNAVGFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYAS 392

Query: 222 PPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPGG 279
           PP +S       P   P P   P         G   PNMP P PS  PPG  G  Q   G
Sbjct: 393 PPPMSPMKAMSNPAGTPPPQVRPGSAGIPMEVG-SYPNMPHPQPSHQPPGAMGIGQRNMG 451

Query: 280 P-----PKPW---------------PEG-PMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
           P      +P+               P G P      P +  ++LIP Q      P+   +
Sbjct: 452 PRNMQQSRPFIGMSSAPRELTGHMRPNGCPGVGLGDPQAIQERLIPGQQHPGQQPSFQQL 511

Query: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITP 354
           P       PP    PG   Q +P  P HQ  +++ P
Sbjct: 512 PTC-----PPLQPHPGLHHQSSPPHPHHQPWAQLHP 542



 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 90/380 (23%), Positives = 120/380 (31%), Gaps = 79/380 (20%)

Query: 20  PGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQD---NMHQMHKPM 76
           P P P     P P PS            GPP+ GHP   Q  G Y      +M Q  +P 
Sbjct: 165 PQPQP-----PQPAPS------------GPPAQGHPQHMQQMGSYMARGDFSMQQHGQPQ 207

Query: 77  ESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPA 136
           + M +     +        +     GH    P  SP    S  + S      H S+ +  
Sbjct: 208 QRMSQFSQGQEGLNQGNPFIATSGPGHLSHVPQQSPSMAPSLRH-SVQQFHHHPSTALHG 266

Query: 137 SGPSSGPQMSSGPGGAPLDGA-DPQALGQQNRG---PTPFNQNQLHQLRAQIMAYKMLAR 192
              +  P+ S  P   P  GA  PQ L   +R    P+P   N       Q   Y     
Sbjct: 267 ESVAHSPRFSPNP---PQQGAVRPQTLNFSSRSQTVPSPTINNS-----GQYSRYPYSNL 318

Query: 193 GQPLPDHLQMAVQ-GKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSR 251
            Q L ++  M    G      M Q +P  P    +A G                   +  
Sbjct: 319 NQGLVNNTGMNQNLGLTNNTPMNQSVPRYP----NAVG-------------------FPS 355

Query: 252 PHGMGGPNMPPPGPSGVPPGM------PGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
             G G  +  P  PSG    M      P QP G    P P  PM   + P  TP   + P
Sbjct: 356 NSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRP 415

Query: 306 QPTG----------RPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPI 355
              G           P P P   PP A  +   +   P    Q  P + +      +T  
Sbjct: 416 GSAGIPMEVGSYPNMPHPQPSHQPPGAMGI-GQRNMGPRNMQQSRPFIGMSSAPRELTGH 474

Query: 356 QKPR-----GLDPVEILQER 370
            +P      GL   + +QER
Sbjct: 475 MRPNGCPGVGLGDPQAIQER 494



 Score = 41.2 bits (95), Expect = 0.008
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 11/111 (9%)

Query: 543  DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD 602
            D  K+K L   L+    Y  ++   V ++     +  +K K+K+ +  N           
Sbjct: 2584 DAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPN--------- 2634

Query: 603  GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAP 653
               LD  +   +  V V++  +GK + G  AP    L  WLE NP + VAP
Sbjct: 2635 --KLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAP 2683



 Score = 38.5 bits (88), Expect = 0.054
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 561  VANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVI 620
            V  L  L   HK   ++ E  +  K  + +     T  I   G+ LD      D  + VI
Sbjct: 2519 VEGLDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQ-LDP-----DTRIPVI 2572

Query: 621  HVESGKILTGTDAPKAGQLEAWLEMNPGYEV 651
            ++E G  L G DAPK   L  WL+++P Y V
Sbjct: 2573 NLEDGTRLVGEDAPKNKDLVEWLKLHPTYTV 2603



 Score = 36.2 bits (82), Expect = 0.27
 Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 36/239 (15%)

Query: 1434 DDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKE 1493
            DDE         P  E+ +       + ++KI + V+ +       QL E         +
Sbjct: 2033 DDEPPDLSSIIEPITEERASRTLYRIELLRKIREQVLHHP------QLGERLKLCQPSLD 2086

Query: 1494 LPEYYELIRKPVDFK--KIKERIRNHKYRSLNDLEKDVMLLCQN---------------- 1535
            LPE++E  R   D      K  +    Y  LND E   +   +N                
Sbjct: 2087 LPEWWECGRHDRDLLVGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGNTSSLNPL 2146

Query: 1536 ----AQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK--EDDSEGEESEEEEE--GEEEGSE 1587
                 QT  +  S   +D  VL+     V +      ++  EG+E EEE +  G+E   E
Sbjct: 2147 AVGFVQTPPVISSAHIQDERVLEQAEGKVEEPENPAAKEKCEGKEEEEETDGSGKESKQE 2206

Query: 1588 SESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSR--AKPVVSDDDSEEEQEEDRSGSGS 1644
             E+ +  VK +L   E   D   G +    +GS    +  + DDD  EE  +  +G+ S
Sbjct: 2207 CEAEASSVKNELKGVEVGAD--TGSKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVS 2263



 Score = 34.3 bits (77), Expect = 1.0
 Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 30/175 (17%)

Query: 1336 RLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEG 1395
            R++E+ E      ++ A  E+   +EEEE+  G G   ++E + +++ + K  LK +E G
Sbjct: 2166 RVLEQAEGKVEEPENPAAKEKCEGKEEEEETDGSGKESKQECE-AEASSVKNELKGVEVG 2224

Query: 1396 T----------------LEEIEEEVRQKKS--------SRKRKRDSDAGSSTPTTSTRSR 1431
                              E++E++ + ++S        SR +  D ++ +S  T    +R
Sbjct: 2225 ADTGSKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETR 2284

Query: 1432 D-----KDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQL 1481
            D       D S  Q    R  A    P    +  ++  I +AV+K K   + RQ+
Sbjct: 2285 DGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQM 2339



 Score = 33.1 bits (74), Expect = 2.3
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 13/81 (16%)

Query: 1397 LEEIEEEVRQKKSSRKR-------------KRDSDAGSSTPTTSTRSRDKDDESKKQKKR 1443
            L  IE++ +QKK  +K              K D   G      +  S D   E KK+KKR
Sbjct: 587  LPSIEQQPQQKKKKKKNNHIVAEDPSKGFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKR 646

Query: 1444 GRPPAEKLSPNPPNLTKKMKK 1464
             +   +   P  P   K+ K+
Sbjct: 647  SKAKKDPKEPKEPKEKKEPKE 667



 Score = 31.2 bits (69), Expect = 8.7
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 31/141 (21%)

Query: 554 LQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS 613
           L ++D+Y+ ++ +  +Q          KKKKKK     AE  +   G D           
Sbjct: 580 LVKSDDYLPSIEQQPQQ----------KKKKKKNNHIVAEDPSKGFGKD----------- 618

Query: 614 DLPVKVIHVESGK-ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEE 672
           D P  V + E  +  L G+   K  +  +  + +P          E    +E++E +E +
Sbjct: 619 DFPGGVDNQELNRNSLDGSQEEKKKKKRSKAKKDP---------KEPKEPKEKKEPKEPK 669

Query: 673 QPQAAQPPTLPVEEKKKIPDP 693
            P+A + P  P E+K K   P
Sbjct: 670 TPKAPKIPKEPKEKKAKTATP 690


>gi|114326455 chromodomain helicase DNA binding protein 8 [Homo
            sapiens]
          Length = 2302

 Score =  362 bits (928), Expect = 2e-99
 Identities = 313/1039 (30%), Positives = 474/1039 (45%), Gaps = 141/1039 (13%)

Query: 301  KLIPPQPTGRPSPA-PPAVPPAA-SPVMPPQTQSPGQ-PAQ--PAPMVPLHQKQSRITPI 355
            +++P  P+ +P P  PP+  P   S V   Q   PGQ P Q    P+  + Q Q+  +  
Sbjct: 73   QIVPQPPSSQPQPQQPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPVKVVLQPQAGSSQ- 131

Query: 356  QKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQ 415
                GL  V++L   E    +            P S A     K  +E         + Q
Sbjct: 132  GASSGLSVVKVLSASEVAALSS-----------PASSAPHSGGKTGMEENR----RLEHQ 176

Query: 416  LRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQ-E 474
             +QE      +   +     A+A  R ++   R     E    + + E E+KRR+K   E
Sbjct: 177  KKQE------KANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEEEGEKKRRKKSAGE 230

Query: 475  YLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAED 534
             L    +  K  K    S T    KL           +R    +N  +E    +    ++
Sbjct: 231  RLKE--EKPKKSKTSGASKTKGKSKLNTITPVVGKKRKRNTSSDNSDVEVMPAQSPREDE 288

Query: 535  EEGYRKLIDQKKDKRLAYL----LQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAE 590
            E   +K    ++ KR  Y     ++ TD+      ++    K   +  E           
Sbjct: 289  ESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEEVDVTGPIKPEPILPE----------- 337

Query: 591  NAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPK---AGQLEAWLEMNP 647
                  P   PDGE L       + P +       K+L+     K   +GQ     E   
Sbjct: 338  ------PVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSGQYTEAEEFFV 391

Query: 648  GYEVAPRSDSEESGSEEEEEEEEEEQP------QAAQPPTLPVEEKKKIPDPDSDDVSEV 701
             Y+       E +   + E+++   Q       + AQ      E+++   +PD  +V  +
Sbjct: 392  KYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPF-NPDYVEVDRI 450

Query: 702  -DARHIIEN------------------------AKQDVDD----EYGVSQALARGLQSYY 732
             D  H I+                          K+DVD+    E+   Q+    L+   
Sbjct: 451  LDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVN 510

Query: 733  AVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL 792
                +  ++++          L++YQ++G+ WL+  + N  N ILADEMGLGKTIQ+IA 
Sbjct: 511  RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAF 570

Query: 793  ITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVP------ 846
            +  +  +  I+GPFL+I PLST++NW  EF+ W   +  + Y GS A+R+          
Sbjct: 571  LQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCK 628

Query: 847  ----QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900
                +L  G  KF+ L+TT+E I+ D   L +I W+ +I+DE HR+KN +CKL   L  H
Sbjct: 629  DSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLK-H 687

Query: 901  YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960
                 ++LLTGTPLQN + EL++LL+FL P+ F S S F + F           DL  EE
Sbjct: 688  MDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEE 737

Query: 961  TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020
             +   ++L  +L+P +LRRLK++VE  L  K E +I+ +++ +Q+  YR +  K      
Sbjct: 738  QV---QKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS 794

Query: 1021 GSEKDKKGKGGTK--TLMNTIMQLRKICNHPYMFQHIEES----FSEHLGFTGGIVQGLD 1074
                  KG G T    L+NT+M+LRK CNHPY+    EE     F E             
Sbjct: 795  ------KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQA 848

Query: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134
            + R++GK  L+D++LPKL+A  HKVL+F QM   + I+EDY   R + Y R+DG  +   
Sbjct: 849  MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 908

Query: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194
            R   +  F++P S+ F+FLL TRAGGLG+NL +ADT IIFDSDWNP  DLQAQ R HRIG
Sbjct: 909  RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 968

Query: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA-----------GMFDQKSSSHER 1243
            Q   V+V RL T NS E ++   A  KL +D+ V+Q+             F +K      
Sbjct: 969  QSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLL 1028

Query: 1244 RAFLQAILEHEEQDESRHC 1262
            R    A +  E+ + S+ C
Sbjct: 1029 RKGAYAAIMEEDDEGSKFC 1047



 Score = 38.5 bits (88), Expect = 0.054
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 12/77 (15%)

Query: 581  KKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS---DLPVKVIHVESGKILTGTDAPKAG 637
            KKK  +KK    E          E ++E + +    +  + VI+   G +L G DAP+  
Sbjct: 2006 KKKGNRKKLVELEV---------ECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRA 2056

Query: 638  QLEAWLEMNPGYEVAPR 654
            +LE WL+ +P + V PR
Sbjct: 2057 ELEMWLQGHPEFAVDPR 2073



 Score = 35.0 bits (79), Expect = 0.60
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 14/119 (11%)

Query: 1325 REEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLT 1384
            R  AR  +  PR++ EDELPS   +++ E +R       +K  G   +  K      S  
Sbjct: 192  RARARGEQNIPRVLNEDELPSVRPEEEGEKKR------RKKSAGERLKEEKPKKSKTSGA 245

Query: 1385 EKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKR 1443
             K   K+     L  I   V +K   RKR   SD  S       +S  +D+ES  QK+R
Sbjct: 246  SKTKGKS----KLNTITPVVGKK---RKRNTSSD-NSDVEVMPAQSPREDEESSIQKRR 296


>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
            sapiens]
          Length = 2715

 Score =  358 bits (920), Expect = 2e-98
 Identities = 265/804 (32%), Positives = 389/804 (48%), Gaps = 124/804 (15%)

Query: 453  TEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHR-----SVTGKIQKLTKAVATY 507
            TE  + Q++    + +R+K+ E L        DFK         +V G  +    + +T 
Sbjct: 228  TESTDSQKRRSGRQVKRRKYNEDL--------DFKVVDDDGETIAVLGAGRTSALSASTL 279

Query: 508  HANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYV----AN 563
                E   + +   IEK    + + E   G     +   D  L Y+  +   Y+    A 
Sbjct: 280  AWQAEEPPEDDANIIEKILASKTVQEVHPG-----EPPFDLELFYVKYRNFSYLHCKWAT 334

Query: 564  LTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVE 623
            + EL +  + AQ  K  + K+ + K    E       PD   +D         ++V H +
Sbjct: 335  MEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRI-------LEVAHTK 387

Query: 624  SGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLP 683
              +  TG +      L  W  +            EES  E EE+ +  +  +      LP
Sbjct: 388  DAE--TGEEVTH--YLVKWCSL----------PYEESTWELEEDVDPAKVKEFESLQVLP 433

Query: 684  VEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVD 743
              E K +  P SD   +++     +N+ Q                               
Sbjct: 434  --EIKHVERPASDSWQKLEKSREYKNSNQ------------------------------- 460

Query: 744  KQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRIN 803
                      L++YQ++G+ WL+  + N  N ILADEMGLGKTIQ+I  ++ +   + I+
Sbjct: 461  ----------LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-RGIH 509

Query: 804  GPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV------------PQLRSG 851
            GPFLII PLST++NW  EF  W   +  + Y GS  +R+               P     
Sbjct: 510  GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVF 568

Query: 852  KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
            KF+V++TT+E I+ D   L KI W  +I+DE HR+KN +CKL + L        ++LLTG
Sbjct: 569  KFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKL-MALEHKVLLTG 627

Query: 912  TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
            TPLQN + EL++LLNFL P+ F S + F + F           DL  EE +   ++L  +
Sbjct: 628  TPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 674

Query: 972  LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGV-LLTDGSEKDKKGKG 1030
            L+P +LRRLK +VE  L  K E +I+ +++ +Q+  YR +  K    LT G+ +      
Sbjct: 675  LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNM--- 731

Query: 1031 GTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGI----VQGLDLYRASGKFELLD 1086
                L+NT+M+LRK CNHPY+    EE   E    T        Q   + +A+GK  L+D
Sbjct: 732  --PNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLID 789

Query: 1087 RILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPG 1146
            ++LPKL A  HKVL+F QM   + I+EDY   R + Y R+DG  +   R   +  F +P 
Sbjct: 790  KLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPD 849

Query: 1147 SEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT 1206
            S+ F+FLL TRAGGLG+NL +ADT IIFDSDWNP  DLQAQ R HRIGQ   V+V RL T
Sbjct: 850  SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 909

Query: 1207 VNSVEEKILAAAKYKLNVDQKVIQ 1230
             NS E ++   A  KL +D+ V+Q
Sbjct: 910  RNSYEREMFDKASLKLGLDKAVLQ 933


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
            sapiens]
          Length = 2881

 Score =  354 bits (908), Expect = 4e-97
 Identities = 226/585 (38%), Positives = 327/585 (55%), Gaps = 55/585 (9%)

Query: 711  KQDVD----DEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLV 766
            K+DVD    +E+   QA     +        + +++D+         L++YQ++GL WL+
Sbjct: 813  KEDVDLAKIEEFEQLQASRPDTRRLDRPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLL 872

Query: 767  SLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWA 826
              + N  N ILADEMGLGKTIQ+I  + Y +    I GPFLII PLST++NW  EF  W 
Sbjct: 873  FNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGIRGPFLIIAPLSTIANWEREFRTWT 931

Query: 827  PSVVKVSYKGSPAARRAFVPQ-----------LRSG-KFNVLLTTYEYIIKDKHILAKIR 874
               V V Y GS  +R+                +R   +F  ++TT+E I+     L  I 
Sbjct: 932  DINVVV-YHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIE 990

Query: 875  WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFK 934
            W+ +I+DE HR+KN +CKL + L    +   ++LLTGTPLQN + EL++LL+FL P  F 
Sbjct: 991  WRCVIIDEAHRLKNKNCKLLEGLKLMNLE-HKVLLTGTPLQNTVEELFSLLHFLEPLRFP 1049

Query: 935  SCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEY 994
            S STF Q F           DL  EE +   ++L  +L+P +LRRLK++VE +L  K E 
Sbjct: 1050 SESTFMQEFG----------DLKTEEQV---QKLQAILKPMMLRRLKEDVEKKLAPKEET 1096

Query: 995  VIKCDMSALQRVLYRHMQAKGV-LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
            +I+ +++ +Q+  YR +  K    L+ G+     G+     L+NT+M+LRK CNHPY+ +
Sbjct: 1097 IIEVELTNIQKKYYRAILEKNFSFLSKGA-----GQTNVPNLVNTMMELRKCCNHPYLIK 1151

Query: 1054 HIEES----FSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1109
              EE     F +             + +++GK  L+D++LPK++A  HKVL+F QM   +
Sbjct: 1152 GAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCL 1211

Query: 1110 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1169
             I+EDY  ++ + Y R+DG  +   R   +  F++P S+ F+FLL TRAGGLG+NL +AD
Sbjct: 1212 DILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAAD 1271

Query: 1170 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
            T IIFDSDWNP  DLQAQ R HRIGQ   V+V RL T NS E ++   A  KL +D+ V+
Sbjct: 1272 TCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVL 1331

Query: 1230 QA--------GMFDQKSSSH----ERRAFLQAILEHEEQDESRHC 1262
            Q+        G   Q S        RR    AI+E EE + S+ C
Sbjct: 1332 QSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIME-EEDEGSKFC 1375



 Score = 43.9 bits (102), Expect = 0.001
 Identities = 53/207 (25%), Positives = 83/207 (40%), Gaps = 32/207 (15%)

Query: 594  GQTPAIG---PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY- 649
            G  PA+    P G P  E+      PV VI+++ G  L G DAPK   LE WL+ +PGY 
Sbjct: 2451 GINPALSYTQPQGIPDTES------PVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYV 2504

Query: 650  ----EVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEK---------KKIPDPDSD 696
                   PR    E     +++      P      +L  EE+         +K+    + 
Sbjct: 2505 EDLGAFIPRMQLHE--GRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAP 2562

Query: 697  DVSEVDARHIIENAKQDVDDEYG--VSQA--LARGLQSYYAVAHAVTERVDKQSALMVNG 752
             + ++  R + EN++  V  E+G  V Q+  L   +         V E V ++     +G
Sbjct: 2563 PLKDL-CRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSG 2621

Query: 753  VLKQYQIKGLEWLVSLYNNNL--NGIL 777
            + K           S+  N L  NG+L
Sbjct: 2622 IAKATAAAAAASATSVSGNPLLANGLL 2648


>gi|148612870 chromodomain helicase DNA binding protein 1-like [Homo
            sapiens]
          Length = 897

 Score =  353 bits (906), Expect = 8e-97
 Identities = 270/773 (34%), Positives = 385/773 (49%), Gaps = 64/773 (8%)

Query: 754  LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813
            L+ YQ++G+ WL   ++     IL DEMGLGKT QTIAL  YL       GPFLI+ PLS
Sbjct: 46   LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105

Query: 814  TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS-GKFNVLLTTYEYIIKDKHILAK 872
             LSNW  E  ++AP +  V+Y G    R      L+   +F+VLLTTYE  +KD   L  
Sbjct: 106  VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKS 165

Query: 873  IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTI 932
              W  ++VDE HR+KN    L + L+   V    LLLTGTP+QN L EL++LL+F+ P +
Sbjct: 166  FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVV-FSLLLTGTPIQNSLQELYSLLSFVEPDL 224

Query: 933  FKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKV 992
            F      +      F    + ++   E        LHK+L+PFLLRR+K EV  +LP+K 
Sbjct: 225  FSKEEVGD------FIQRYQDIEKESESA----SELHKLLQPFLLRRVKAEVATELPKKT 274

Query: 993  EYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMF 1052
            E VI   MSALQ+  Y+ +  K +   + +E  KK K     L N + QLRK  +HPY+F
Sbjct: 275  EVVIYHGMSALQKKYYKAILMKDLDAFE-NETAKKVK-----LQNILSQLRKCVDHPYLF 328

Query: 1053 QHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112
              +E    E          G  L  ASGK  LLD++L  L +  H+VLLF QMT ++ I+
Sbjct: 329  DGVEPEPFE---------VGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDIL 379

Query: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172
            +DY  YRG+ Y R+DG+ + E+R + +K F +     F+FLLSTRAGG+G+NL +ADTVI
Sbjct: 380  QDYMDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPIFVFLLSTRAGGVGMNLTAADTVI 437

Query: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG 1232
              DSD+NP  DLQA  RAHRIGQ   V+V+RL   ++VEE +   A  KL +   +I+ G
Sbjct: 438  FVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGG 497

Query: 1233 MFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEE--PPL 1290
             F   +      A LQ     +   +    S GS                 DLE      
Sbjct: 498  HFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEI------------DLESILGET 545

Query: 1291 KEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED--ELPSWII 1348
            K+   V D     +  +R +EE      M L   ++ ++ P ++ R   E    L   ++
Sbjct: 546  KDGQWVSDALPAAEGGSRDQEEGK--NHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLL 603

Query: 1349 KDDAEVERLTCEEEEEKMFG--RGSRHRKEVDYSDSLTEKQWLKAIEEGTLEE---IEEE 1403
            +  ++  R    +    + G   GS  RK V   + L ++Q  K  +E   +    IEE+
Sbjct: 604  EKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQ--KKRQEAAAKRRRLIEEK 661

Query: 1404 VRQKKSSRKRKR----DSDAGSSTPTTSTRSRDKD----DESKKQKKRGRPPAEKLSPNP 1455
             RQK+ +  +K+    +S+   S    S  S  +D    +ES  +     P A  L    
Sbjct: 662  KRQKEEAEHKKKMAWWESNNYQSFCLPSEESEPEDLENGEESSAELDYQDPDATSLKYVS 721

Query: 1456 PNLTKKMKKIVDAVIKYKDSSSGR-QLSEVFIQLPSRKELP-EYYELIRKPVD 1506
             ++T       DA+I +    SG      +F  L  R   P + YEL  K  D
Sbjct: 722  GDVTHPQAGAEDALIVHCVDDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKD 774


>gi|190358534 SWI/SNF-related, matrix-associated actin-dependent
            regulator of chromatin, subfamily a, containing DEAD/H
            box 1 isoform b [Homo sapiens]
          Length = 1026

 Score =  306 bits (784), Expect = 1e-82
 Identities = 274/941 (29%), Positives = 426/941 (45%), Gaps = 118/941 (12%)

Query: 362  DPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVV 421
            +P E  + +     AR    I ELE+L  S   DL+      LK L        L + + 
Sbjct: 125  EPSEDEESQGLPTMARRNDDISELEDL--SELEDLKDAKLQTLKELFPQRSDNDLLKLIE 182

Query: 422  VCMRRDTALETAL-----NAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYL 476
                 D A+  AL          ++ K  S  E    ++    Q I   +K R  H E  
Sbjct: 183  STSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI---KKTRLDHGEES 239

Query: 477  NSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEE 536
            N   + + ++++    V     KL K    +     RE  KE+E +  E +  L    E+
Sbjct: 240  NESAESSSNWEKQESIVL----KLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAED 295

Query: 537  GYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAEN----A 592
               + + Q +      +  ++  Y  N T+   + K +  A+    KK+KK   N     
Sbjct: 296  QDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVV 355

Query: 593  EGQTPAIGPD-GEPLDETSQMSDLPV------KVIH-VESGKILTGTDAPKAGQLEAW-- 642
            E      G D G  LDE     +  +      K++H ++   I   T  P+  Q +A   
Sbjct: 356  EDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKI 415

Query: 643  LEMNP--GYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700
             E+ P   +E      S+ +G  E+                  +   K +       + E
Sbjct: 416  TELRPFNSWEALFTKMSKTNGLSEDL-----------------IWHCKTL-------IQE 451

Query: 701  VDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
             D    + N  +D+ ++      +  G    +         +++ S L  +  LK YQ  
Sbjct: 452  RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGW--------NIEQPSILNQSLSLKPYQKV 503

Query: 761  GLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAY 820
            GL WL  ++ + LNGILADEMGLGKTIQ IA + YL +    NGP LI+VP ST+ NW  
Sbjct: 504  GLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-NGPHLIVVPASTIDNWLR 562

Query: 821  EFDKWAPSVVKVSYKGSPAARR--AFVPQLRSGKFNVLLTTYEYIIK---DKHILAKIRW 875
            E + W P++  + Y GS   R+   F    R   +NV++TTY   I    D+ +  +++ 
Sbjct: 563  EVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKL 622

Query: 876  KYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKS 935
             Y I DEGH +KN      Q L T   A  RLLLTGTP+QN L EL +LLNF++P +F S
Sbjct: 623  NYAIFDEGHMLKNMGSIRYQHLMT-INANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSS 681

Query: 936  CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYV 995
             ++  +   +    + ++  + E+E    I    ++++PF+LRR+K+EV  QLP K + +
Sbjct: 682  STSEIRRMFSSKTKSADEQSIYEKER---IAHAKQIIKPFILRRVKEEVLKQLPPKKDRI 738

Query: 996  IKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYM---- 1051
              C MS  Q  LY  +  +     +  EK+ +       + N +MQLRK+ NHP +    
Sbjct: 739  ELCAMSEKQEQLYLGLFNRLKKSINNLEKNTE-------MCNVMMQLRKMANHPLLHRQY 791

Query: 1052 ---------------------------FQHIE--ESFSEHL-----GFTGGIVQGLDLYR 1077
                                       F+ +E    F  H+              +DL  
Sbjct: 792  YTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDLIL 851

Query: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137
             SGKF +L  IL +L+    +V+LF Q T ++ I+E    +   +YLRLDG T+  +R  
Sbjct: 852  DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 911

Query: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQN 1197
            L+  FN    + F+FLLST+AGGLG+NL SA+ VI+ D D NP+ D QA+DR HR+GQ  
Sbjct: 912  LIDEFN-TDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTK 970

Query: 1198 EVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKS 1238
            EV V++L +  ++EE +L   + KL ++Q +      D+ S
Sbjct: 971  EVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGS 1011


>gi|190358536 SWI/SNF-related, matrix-associated actin-dependent
            regulator of chromatin, subfamily a, containing DEAD/H
            box 1 isoform a [Homo sapiens]
          Length = 1028

 Score =  305 bits (780), Expect = 3e-82
 Identities = 275/943 (29%), Positives = 428/943 (45%), Gaps = 120/943 (12%)

Query: 362  DPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVV 421
            +P E  + +     AR    I ELE+L  S   DL+      LK L        L + + 
Sbjct: 125  EPSEDEESQGLPTMARRNDDISELEDL--SELEDLKDAKLQTLKELFPQRSDNDLLKLIE 182

Query: 422  VCMRRDTALETAL-----NAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYL 476
                 D A+  AL          ++ K  S  E    ++    Q I   +K R  H E  
Sbjct: 183  STSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI---KKTRLDHGEES 239

Query: 477  NSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEE 536
            N   + + ++++    V     KL K    +     RE  KE+E +  E +  L    E+
Sbjct: 240  NESAESSSNWEKQESIVL----KLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAED 295

Query: 537  GYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAEN----A 592
               + + Q +      +  ++  Y  N T+   + K +  A+    KK+KK   N     
Sbjct: 296  QDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVV 355

Query: 593  EGQTPAIGPD-GEPLDETSQMSDLPV------KVIH-VESGKILTGTDAPKAGQLEAW-- 642
            E      G D G  LDE     +  +      K++H ++   I   T  P+  Q +A   
Sbjct: 356  EDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKI 415

Query: 643  LEMNP--GYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700
             E+ P   +E      S+ +G  E+                  +   K +       + E
Sbjct: 416  TELRPFNSWEALFTKMSKTNGLSEDL-----------------IWHCKTL-------IQE 451

Query: 701  VDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
             D    + N  +D+ ++      +  G    +         +++ S L  +  LK YQ  
Sbjct: 452  RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGW--------NIEQPSILNQSLSLKPYQKV 503

Query: 761  GLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAY 820
            GL WL  ++ + LNGILADEMGLGKTIQ IA + YL +    NGP LI+VP ST+ NW  
Sbjct: 504  GLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-NGPHLIVVPASTIDNWLR 562

Query: 821  EFDKWAPSVVKVSYKGSPAARR--AFVPQLRSGKFNVLLTTYEYIIK---DKHILAKIRW 875
            E + W P++  + Y GS   R+   F    R   +NV++TTY   I    D+ +  +++ 
Sbjct: 563  EVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKL 622

Query: 876  KYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKS 935
             Y I DEGH +KN      Q L T   A  RLLLTGTP+QN L EL +LLNF++P +F S
Sbjct: 623  NYAIFDEGHMLKNMGSIRYQHLMT-INANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSS 681

Query: 936  CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYV 995
             ++  +   +    + ++  + E+E    I    ++++PF+LRR+K+EV  QLP K + +
Sbjct: 682  STSEIRRMFSSKTKSADEQSIYEKER---IAHAKQIIKPFILRRVKEEVLKQLPPKKDRI 738

Query: 996  IKCDMSALQRVLYRHM--QAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYM-- 1051
              C MS  Q  LY  +  + K  +    +EK+ +       + N +MQLRK+ NHP +  
Sbjct: 739  ELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTE-------MCNVMMQLRKMANHPLLHR 791

Query: 1052 -----------------------------FQHIE--ESFSEHL-----GFTGGIVQGLDL 1075
                                         F+ +E    F  H+              +DL
Sbjct: 792  QYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDL 851

Query: 1076 YRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDR 1135
               SGKF +L  IL +L+    +V+LF Q T ++ I+E    +   +YLRLDG T+  +R
Sbjct: 852  ILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 911

Query: 1136 GMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQ 1195
              L+  FN    + F+FLLST+AGGLG+NL SA+ VI+ D D NP+ D QA+DR HR+GQ
Sbjct: 912  IHLIDEFN-TDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 970

Query: 1196 QNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKS 1238
              EV V++L +  ++EE +L   + KL ++Q +      D+ S
Sbjct: 971  TKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGS 1013


>gi|190358532 SWI/SNF-related, matrix-associated actin-dependent
            regulator of chromatin, subfamily a, containing DEAD/H
            box 1 isoform a [Homo sapiens]
          Length = 1028

 Score =  305 bits (780), Expect = 3e-82
 Identities = 275/943 (29%), Positives = 428/943 (45%), Gaps = 120/943 (12%)

Query: 362  DPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVV 421
            +P E  + +     AR    I ELE+L  S   DL+      LK L        L + + 
Sbjct: 125  EPSEDEESQGLPTMARRNDDISELEDL--SELEDLKDAKLQTLKELFPQRSDNDLLKLIE 182

Query: 422  VCMRRDTALETAL-----NAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYL 476
                 D A+  AL          ++ K  S  E    ++    Q I   +K R  H E  
Sbjct: 183  STSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI---KKTRLDHGEES 239

Query: 477  NSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEE 536
            N   + + ++++    V     KL K    +     RE  KE+E +  E +  L    E+
Sbjct: 240  NESAESSSNWEKQESIVL----KLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAED 295

Query: 537  GYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAEN----A 592
               + + Q +      +  ++  Y  N T+   + K +  A+    KK+KK   N     
Sbjct: 296  QDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVV 355

Query: 593  EGQTPAIGPD-GEPLDETSQMSDLPV------KVIH-VESGKILTGTDAPKAGQLEAW-- 642
            E      G D G  LDE     +  +      K++H ++   I   T  P+  Q +A   
Sbjct: 356  EDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKI 415

Query: 643  LEMNP--GYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700
             E+ P   +E      S+ +G  E+                  +   K +       + E
Sbjct: 416  TELRPFNSWEALFTKMSKTNGLSEDL-----------------IWHCKTL-------IQE 451

Query: 701  VDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760
             D    + N  +D+ ++      +  G    +         +++ S L  +  LK YQ  
Sbjct: 452  RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGW--------NIEQPSILNQSLSLKPYQKV 503

Query: 761  GLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAY 820
            GL WL  ++ + LNGILADEMGLGKTIQ IA + YL +    NGP LI+VP ST+ NW  
Sbjct: 504  GLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-NGPHLIVVPASTIDNWLR 562

Query: 821  EFDKWAPSVVKVSYKGSPAARR--AFVPQLRSGKFNVLLTTYEYIIK---DKHILAKIRW 875
            E + W P++  + Y GS   R+   F    R   +NV++TTY   I    D+ +  +++ 
Sbjct: 563  EVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKL 622

Query: 876  KYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKS 935
             Y I DEGH +KN      Q L T   A  RLLLTGTP+QN L EL +LLNF++P +F S
Sbjct: 623  NYAIFDEGHMLKNMGSIRYQHLMT-INANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSS 681

Query: 936  CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYV 995
             ++  +   +    + ++  + E+E    I    ++++PF+LRR+K+EV  QLP K + +
Sbjct: 682  STSEIRRMFSSKTKSADEQSIYEKER---IAHAKQIIKPFILRRVKEEVLKQLPPKKDRI 738

Query: 996  IKCDMSALQRVLYRHM--QAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYM-- 1051
              C MS  Q  LY  +  + K  +    +EK+ +       + N +MQLRK+ NHP +  
Sbjct: 739  ELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTE-------MCNVMMQLRKMANHPLLHR 791

Query: 1052 -----------------------------FQHIE--ESFSEHL-----GFTGGIVQGLDL 1075
                                         F+ +E    F  H+              +DL
Sbjct: 792  QYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDL 851

Query: 1076 YRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDR 1135
               SGKF +L  IL +L+    +V+LF Q T ++ I+E    +   +YLRLDG T+  +R
Sbjct: 852  ILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 911

Query: 1136 GMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQ 1195
              L+  FN    + F+FLLST+AGGLG+NL SA+ VI+ D D NP+ D QA+DR HR+GQ
Sbjct: 912  IHLIDEFN-TDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 970

Query: 1196 QNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKS 1238
              EV V++L +  ++EE +L   + KL ++Q +      D+ S
Sbjct: 971  TKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGS 1013


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score =  274 bits (700), Expect = 6e-73
 Identities = 167/456 (36%), Positives = 254/456 (55%), Gaps = 57/456 (12%)

Query: 631  TDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKI 690
            +D    G +EA  E  P  + + +SDS E  SE+EE+E  EE+  +    +   EE +  
Sbjct: 475  SDCEPEGPVEA--EEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSAS---EESESE 529

Query: 691  PDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHA------------- 737
               D+   S+ D        +++ DD++GV   LAR  +   A A +             
Sbjct: 530  ESEDAQSQSQAD--------EEEEDDDFGVEYLLARDEEQSEADAGSGPPTPGPTTLGPK 581

Query: 738  --------------------VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGIL 777
                                 T +V     L++ G L++YQ  GL+WLV++Y   LNGIL
Sbjct: 582  KEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGIL 641

Query: 778  ADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS 837
            ADEMGLGKTIQTI+L+ +L   K   GP LIIVP S + NW  E  +W PS   ++Y G+
Sbjct: 642  ADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGA 701

Query: 838  PAARR-AFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
               R+       +   F+V +T+Y+ +++D     +  W+Y+I+DE   +KN   +  Q 
Sbjct: 702  QKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQS 761

Query: 897  LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
            L  ++ + RRLLLTGTPLQN L ELW+L++FL+P +F+S   F++WF+ P  +TG  ++ 
Sbjct: 762  L-LNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNP--LTG-MIEG 817

Query: 957  NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGV 1016
            ++E    +++RLHKVLRPFLLRR+K +VE Q+P+K E+VI+C +S  QR LY    A+  
Sbjct: 818  SQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQ-- 875

Query: 1017 LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMF 1052
                 + K+    G   +++N +MQLRK+CNHP +F
Sbjct: 876  ----TTTKETLATGHFMSVINILMQLRKVCNHPNLF 907



 Score =  153 bits (387), Expect = 1e-36
 Identities = 107/342 (31%), Positives = 175/342 (51%), Gaps = 49/342 (14%)

Query: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
            GK + L  +L +L+A  H+VL+F QMT ++ ++E +  Y G  YLRLDG+T+ E R  L+
Sbjct: 2043 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2102

Query: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
            + FN      F F+LSTR+GG+G+NL  ADTV+ +DSDWNP  D QAQDR HRIGQ  +V
Sbjct: 2103 ERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161

Query: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDES 1259
             + RL +  +VEE IL  A  K  +    I+ G F   ++++ ++  ++ + +   ++ S
Sbjct: 2162 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIRELFDMPLEEPS 2218

Query: 1260 RHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDET--VNQMIARHEEEFDLFM 1317
                                  +  +   P +EE+ V   +T  + Q + R E+E D+  
Sbjct: 2219 ----------------------SSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDI-- 2254

Query: 1318 RMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEV 1377
                  R       ++   L E +E   +   +  E  R   E+EE       SR  +E+
Sbjct: 2255 ------RAATQAKAEQVAELAEFNENDGFPAGEGEEAGRPGAEDEEM------SRAEQEI 2302

Query: 1378 -DYSDSLT--EKQWLK----AIEEGTLEEIEEEVRQKKSSRK 1412
                + LT  E+  +K    ++EE + EE+++   Q +++RK
Sbjct: 2303 AALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARK 2344



 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 97/373 (26%), Positives = 124/373 (33%), Gaps = 55/373 (14%)

Query: 3    TPDPPLGGTPRPGPSPGP---GPSPGAMLGPSPGPSPGSAHSMMGPSPGPP--------- 50
            TP PPL   PRP  S  P    P P    G  P P+ G+A +   P P P          
Sbjct: 1322 TPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARA---PMPTPTLVRPLLKLV 1378

Query: 51   -SAGHPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPP 109
             S    +    PG  P      +H P  S+     S  P  N                P 
Sbjct: 1379 HSPSPEVSASAPGAAPLTISSPLHVP-SSLPGPASSPMPIPNS--------------SPL 1423

Query: 110  PSPMDQH-SQGYPSPLGGSEHASSPVPASG----PSSGPQMSSGPGGA-------PLDGA 157
             SP+    S    S L  S   + P PAS     P S P   S  G A       PL   
Sbjct: 1424 ASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPV 1483

Query: 158  DPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQM 217
             P A G  +  P+  + +    L   +     L+  Q  P H  +       +PG+   +
Sbjct: 1484 VPAAPGPPSLAPSGASPS-ASALTLGLATAPSLSSSQ-TPGHPLLLAPTSSHVPGLNSTV 1541

Query: 218  -----PTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272
                 P L P S  A+     P P P      AP + S    +  P  P   P       
Sbjct: 1542 APACSPVLVPASALASPFPSAPNPAPAQASLLAPAS-SASQALATPLAPMAAPQTAILAP 1600

Query: 273  PGQPPGGP-PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP--- 328
               PP  P P   P    A   A + TP  ++ P  T   S A  +  PA +PV+ P   
Sbjct: 1601 SPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSST 1660

Query: 329  QTQSPGQPAQPAP 341
            QT  P     P P
Sbjct: 1661 QTMLPAPVPSPLP 1673



 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 94/408 (23%), Positives = 135/408 (33%), Gaps = 64/408 (15%)

Query: 7    PLGGTPRPGPS-PGPGPSPGAMLGPSPGPSPGSAH----------SMMGPSPGPPSAGHP 55
            P      P PS P P P+  ++L P+   S   A           +++ PSP PP A  P
Sbjct: 1551 PASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLP 1610

Query: 56   IPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ 115
            +    PG  P     Q   P+ +            +   G  + S   A   P P+P+  
Sbjct: 1611 VLAPSPGAAPVLASSQTPVPVMAP-----------SSTPGTSLAS---ASPVPAPTPVLA 1656

Query: 116  HSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAP-LDGADPQ---ALGQQN-RGPT 170
                 PS       A  P P   P+S   ++  P  AP L G+ P    +LG  N +GP 
Sbjct: 1657 -----PSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPF 1711

Query: 171  PFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGP 230
            P           Q ++    +   P P        G           P L P    +  P
Sbjct: 1712 P----------TQTLSLTPASSLVPTPAQTLSLAPG-----------PPLGPTQTLSLAP 1750

Query: 231  GPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMA 290
             P   P    GP PA      P       + P     +       P  GP        +A
Sbjct: 1751 APPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPA---AAQTLA 1807

Query: 291  NAAAPTSTPQKLIPPQPTGRPSPAP-PAVPPAASPVMPPQ----TQSPGQPAQPAPMVPL 345
             A A T +P              AP P    +  PV   +    T   G P+ P+     
Sbjct: 1808 LAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSF 1867

Query: 346  HQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLA 393
               + R  P   PR    ++ L+E+  R ++    RI +L    G+LA
Sbjct: 1868 GGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALA 1915



 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 84/360 (23%), Positives = 127/360 (35%), Gaps = 30/360 (8%)

Query: 28   LGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQ--DNMHQMHKPMESMHEKGMS 85
            + P+PGP+P S      PS  P   G  +P       P   +N   +   +      G++
Sbjct: 1263 VAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGLT 1322

Query: 86   DDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGP------ 139
              P           SG  A + P P+         P+P  G+  A  P P          
Sbjct: 1323 PVPPLAPAP-RPPSSGLPAVLNPRPTLTPGR---LPTPTLGTARAPMPTPTLVRPLLKLV 1378

Query: 140  -SSGPQMS-SGPGGAPLDGADPQALGQQNRGP--TPFNQNQLHQLRAQIMAYKMLARGQP 195
             S  P++S S PG APL  + P  +     GP  +P        L + + +   +    P
Sbjct: 1379 HSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSV----P 1434

Query: 196  LPDHLQMAVQGKRPMPGMQQ-QMPTLPPPSVSATGPGPGPGPGPGPGP----GPAPPNYS 250
            L   L ++V    P P      +P   P +VSA+GP       P   P     P PP+ +
Sbjct: 1435 LSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLA 1494

Query: 251  RPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG---PMANAAAPTSTPQKLIPPQP 307
                    +    G +  P     Q PG P    P     P  N+    +    L+P   
Sbjct: 1495 PSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASA 1554

Query: 308  TGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367
               P P+ P   PA + ++ P   S    A   P+ P+   Q+ I        L P+ +L
Sbjct: 1555 LASPFPSAPNPAPAQASLLAP--ASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVL 1612



 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 40/128 (31%), Positives = 51/128 (39%), Gaps = 11/128 (8%)

Query: 217  MPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNM----PPPGPSGVPPGM 272
            +P  PPP     GP     P PGP P   P +        GP +     PPGP  +PP  
Sbjct: 1022 VPVRPPP-----GPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQ 1076

Query: 273  PGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQS 332
            P         P P G ++  + P +    L P  P   P    PA PP +S ++ P T  
Sbjct: 1077 PNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPA--PVRLSPAPPPGSSSLLKPLTVP 1134

Query: 333  PGQPAQPA 340
            PG    PA
Sbjct: 1135 PGYTFPPA 1142



 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 106/413 (25%), Positives = 135/413 (32%), Gaps = 65/413 (15%)

Query: 1    MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-GP---PSAGHPI 56
            ++ P  PLG  P     P PGP   A   P P P    A  M+  SP GP   P++  P 
Sbjct: 1012 VNNPRAPLGPVP---VRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPG 1068

Query: 57   PTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-- 114
            P   P   P         P       G S  P           +       PPP      
Sbjct: 1069 PVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLL 1128

Query: 115  ---QHSQGYPSPLGGSEHAS--------SPVPASGPSSGPQMSSGPGGAPLDGADPQALG 163
                   GY  P   +   S        + VPA  P+    + S    A L   +  ++G
Sbjct: 1129 KPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIG 1188

Query: 164  Q-QNRGPTPF-NQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPM---------PG 212
            Q  +    P  N      L  QI   K+   G  +    Q+AV   RP+          G
Sbjct: 1189 QLASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQV---RQLAVGQPRPLQRNVVHLVSAG 1245

Query: 213  MQQQMPTLPP--PSVSATGPGPGPG-----PGPGPGPGPAPPNYSRPHGMGGPNMPPP-- 263
             Q  + + P     + A  P PGP      P   P   PAP   S P  +    +PP   
Sbjct: 1246 GQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLP--LAANQVPPTMV 1303

Query: 264  GPSGV---------PPGMPGQPPGGP-PKPWPEG-PMANAAAPTSTPQKLIPPQPT---- 308
              +GV           G+   PP  P P+P   G P      PT TP +L  P PT    
Sbjct: 1304 NNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRL--PTPTLGTA 1361

Query: 309  GRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV---PLHQKQSRITPIQKP 358
              P P P  V P    V  P  +        AP+    PLH   S   P   P
Sbjct: 1362 RAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSP 1414



 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 93/408 (22%), Positives = 125/408 (30%), Gaps = 76/408 (18%)

Query: 3    TPDPPLGGTPRPGPSPGPGP------SPGAMLGPS--PGPSPGSAHSMMGPSP--GPPSA 52
            +P PPL   P   PSPG  P      +P  ++ PS  PG S  SA  +  P+P   P S 
Sbjct: 1601 SPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSST 1660

Query: 53   GHPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH----AGMGP 108
               +P   P   P     Q      ++        P      G G   G        + P
Sbjct: 1661 QTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTP 1720

Query: 109  P----PSPMDQHSQGYPSPLGGSEHAS-------SPVPASGPSSGPQMSSGPGGAPLDGA 157
                 P+P    S     PLG ++  S       +P    GP+    ++  P  +     
Sbjct: 1721 ASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLL 1780

Query: 158  DPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPL--PDHLQMAVQGKRPMP-GMQ 214
             P ++      P P     L    AQ +A    +   P      L ++  G  P+P  M 
Sbjct: 1781 APASVQTLTLSPAPV--PTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMV 1838

Query: 215  QQMPTL-------------PPPSVSATGPGPGPGPGPGPGPGPAPPNY------------ 249
             ++P               P P  +AT  G GP P   P P P  P Y            
Sbjct: 1839 SRLPVSKDEPDTLTLRSGPPSPPSTATSFG-GPRPRRQPPPPPRSPFYLDSLEEKRKRQR 1897

Query: 250  ----------SRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
                      S  HG   P              P   P GP  P P  P        +  
Sbjct: 1898 SERLERIFQLSEAHGALAPVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAAHR 1957

Query: 300  QKLIPPQPTGRPS----------PAPPAVPPAASPVMPPQTQSPGQPA 337
              L P Q   + S          P   A PP+     PP   +P Q A
Sbjct: 1958 AVLFPQQRLDQLSEIIERFIFVMPPVEAPPPSLHACHPPPWLAPRQAA 2005



 Score = 47.8 bits (112), Expect = 9e-05
 Identities = 63/234 (26%), Positives = 84/234 (35%), Gaps = 45/234 (19%)

Query: 125  GGSEHASSP-VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQ 183
            G SE ++SP  P+    SGP+ SS P G P + A   +L      PTP  Q         
Sbjct: 2780 GVSETSASPGSPSVRSMSGPE-SSPPIGGPCEAAPSSSL------PTPPQQ--------- 2823

Query: 184  IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSAT-GPGPGPGPGP---G 239
                  +AR      H+++ V G          +  + PP+V    G  P     P   G
Sbjct: 2824 ----PFIARR-----HIELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPADAG 2874

Query: 240  PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
             G   AP +  +    G    P PGP  +    P   P   P P P GP      P   P
Sbjct: 2875 RGVDEAPSSTLKGKTNGAD--PVPGPETLIVADPVLEPQLIPGPQPLGPQ-----PVHRP 2927

Query: 300  QKLIPP--------QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPL 345
              L+ P         P  R  P P  +  A       +TQ P  P+   P+ PL
Sbjct: 2928 NPLLSPVEKRRRGRPPKARDLPIPGTISSAGDGNSESRTQPPPHPSPLTPLPPL 2981



 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 86/345 (24%), Positives = 122/345 (35%), Gaps = 56/345 (16%)

Query: 31   SPGPSPGSAHSMMGPSPGPP-----SAGHPIPTQGPG--GYPQDNMHQMHKP---MESMH 80
            +P  S  +  S  GPSP  P     SA   I  QG G  G P         P   +  + 
Sbjct: 2700 APSTSSSATSSPEGPSPARPPRRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRLVTVVE 2759

Query: 81   EKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPS--PLGG----SEHASSPV 134
            EK +    R  +     +  G       P SP  +   G  S  P+GG    +  +S P 
Sbjct: 2760 EKELVRRRRQQRGAASTLVPGVSETSASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPT 2819

Query: 135  PASGPSSGP---QMSSGPGGAPLDG------ADPQALGQQNRGPTPFNQNQLHQLRAQIM 185
            P   P       ++    GG+P +G        P A+ ++   P   N++     R    
Sbjct: 2820 PPQQPFIARRHIELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDE 2879

Query: 186  AYKMLARGQPLPDHLQMAVQGKRPMPGMQQQM---PTLPPPSVSATGPGPGP-GPGPGPG 241
            A     +G+           G  P+PG +  +   P L P  +    PGP P GP P   
Sbjct: 2880 APSSTLKGK---------TNGADPVPGPETLIVADPVLEPQLI----PGPQPLGPQPVHR 2926

Query: 242  PGPA-PPNYSRPHGMG--GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANA-AAPT 296
            P P   P   R  G      ++P PG  S    G        PP P P  P+      PT
Sbjct: 2927 PNPLLSPVEKRRRGRPPKARDLPIPGTISSAGDGNSESRTQPPPHPSPLTPLPPLLVCPT 2986

Query: 297  STPQKLI---------PPQPTGRPSPAPPAVPPAASPVMPPQTQS 332
            +T    +         P +  GRP   PP+  P+  PV+   + S
Sbjct: 2987 ATVANTVTTVTISTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSTS 3031



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 113/526 (21%), Positives = 189/526 (35%), Gaps = 110/526 (20%)

Query: 258 PNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSP--AP 315
           P +P      V  GM G  P  P         A++++P S+    I PQ   + S    P
Sbjct: 10  PQLPVLQTQMVSDGMTGSNPVSP---------ASSSSPASSGAGGISPQHIAQDSSLDGP 60

Query: 316 PAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQ 375
           P  P  A+  +P +  S  Q A  A   P  +K                EI ++ ++  +
Sbjct: 61  PGPPDGAT--VPLEGFSLSQAADLANKGPKWEKSH-------------AEIAEQAKH--E 103

Query: 376 ARIAHRIQELENLPGSLAGDLRTKATIELKAL-RLLNFQRQLRQEVVVCMRRDTALETAL 434
           A I  RI EL           R +    LK L ++    R       +C           
Sbjct: 104 AEIETRIAEL-----------RKEGFWSLKRLPKVPEPPRPKGHWDYLCEEMQWLSADFA 152

Query: 435 NAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVT 494
             + +KR   + +   R+  +  ++Q+ ++ER RR++  +        AKD +++  +V 
Sbjct: 153 QERRWKRGVARKV--VRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQFWSNVE 210

Query: 495 GKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLL 554
             +                 Q K+  R+E++R + L                D  L +++
Sbjct: 211 KVV-----------------QFKQQSRLEEKRKKAL----------------DLHLDFIV 237

Query: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSD 614
            QT++Y   L++ + Q   +  A           A +     PA   D E  D   Q  +
Sbjct: 238 GQTEKYSDLLSQSLNQPLTSSKAGSSPCLGSSSAASSP--PPPASRLDDEDGDFQPQEDE 295

Query: 615 LPVKVIHVESGKILTGTDAP----------KAGQL---EAWLEMNPGYEVAPRSDSEESG 661
                  +E  +   G DA           + G+L   E    + P     P S S+   
Sbjct: 296 EEDDEETIEVEEQQEGNDAEAQRREIELLRREGELPLEELLRSLPPQLLEGPSSPSQTPS 355

Query: 662 SEEE------EEEEEEEQPQAAQ--PPTLPVEEKKKIP-DPDSDDVSEVDARHIIENAKQ 712
           S +       EE  EEE PQ  +  PP   V ++ K P  PD DD           N ++
Sbjct: 356 SHDSDTRDGPEEGAEEEPPQVLEIKPPPSAVTQRNKQPWHPDEDD------EEFTANEEE 409

Query: 713 DVDDEYGVSQALARGLQSYYAVAHAV-TERVDKQSALMVNGVLKQY 757
             D+E      +A   Q    V HA+    + ++  L +  +L+QY
Sbjct: 410 AEDEE----DTIAAEEQLEGEVDHAMELSELAREGELSMEELLQQY 451



 Score = 42.4 bits (98), Expect = 0.004
 Identities = 34/117 (29%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 214  QQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMP 273
            Q +  T PP    A    P P P P P P  AP   + P  +  P +  P P   P  + 
Sbjct: 2419 QTRSTTTPPRCSPARERVPRPAPRPRPTPASAPA--AIPALVPVP-VSAPVPISAPNPIT 2475

Query: 274  GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVM--PP 328
              P    P P P   +   ++P  TP     P P   P PA   +   +SP++  PP
Sbjct: 2476 ILPVHILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPP 2532



 Score = 40.8 bits (94), Expect = 0.011
 Identities = 38/143 (26%), Positives = 52/143 (36%), Gaps = 14/143 (9%)

Query: 223  PSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPK 282
            P     GPG G     G G G     + R      P  P    S    G   +  G    
Sbjct: 2357 PQEEEEGPGAGDESSCGTGGG----THRRSKKAKAPERPGTRVSERLRGARAETQGANHT 2412

Query: 283  PWPEGPMANAAAPTSTPQKLIP-----PQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPA 337
            P      A+    T+TP +  P     P+P  RP P P + P A   ++P    +P   +
Sbjct: 2413 PVIS---AHQTRSTTTPPRCSPARERVPRPAPRPRPTPASAPAAIPALVPVPVSAPVPIS 2469

Query: 338  QPAP--MVPLHQKQSRITPIQKP 358
             P P  ++P+H   S   P Q P
Sbjct: 2470 APNPITILPVHILPSPPPPSQIP 2492



 Score = 38.1 bits (87), Expect = 0.071
 Identities = 86/363 (23%), Positives = 121/363 (33%), Gaps = 48/363 (13%)

Query: 4    PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP---GPPSAGHPIPTQG 60
            P PP      P  SP   P P     P+  P P     +   SP   GPPS         
Sbjct: 2483 PSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSV-------- 2534

Query: 61   PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
            P      N+    +P   +  + ++  P   ++  +         + PP   +    +  
Sbjct: 2535 PISASVTNLPLGLRPEAELCAQALAS-PESLELASVASSETSSLSLVPPKDLLPVAVEIL 2593

Query: 121  PSPLGGSEHASSPVPASGPSSGPQMSSGPGG----APLDGADPQALGQQNRGPT-PFNQN 175
            P     SE   S  P S PS   +  S P G    AP D A+   L     G   P   +
Sbjct: 2594 PV----SEKNLSLTP-SAPSLTLEAGSIPNGQEQEAP-DSAEGTTLTVLPEGEELPLCVS 2647

Query: 176  QLHQLRAQIMAYKMLARGQPLPDHLQM------AVQGKRPM--PGMQQQMPTL----PPP 223
            + + L     A    A  +PL + L+         + K P   P   Q++ T     P  
Sbjct: 2648 ESNGLELPPSA----ASDEPLQEPLEADRTSEELTEAKTPTSSPEKPQELVTAEVAAPST 2703

Query: 224  SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG------QPP 277
            S SAT    GP P   P    +     R  G G P   PPGP  V   +PG      +  
Sbjct: 2704 SSSATSSPEGPSPARPPRRRTSADVEIRGQGTGRPGQ-PPGPK-VLRKLPGRLVTVVEEK 2761

Query: 278  GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPV-MPPQTQSPGQP 336
                +   +   A+   P  +     P  P+ R    P + PP   P    P +  P  P
Sbjct: 2762 ELVRRRRQQRGAASTLVPGVSETSASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPTPP 2821

Query: 337  AQP 339
             QP
Sbjct: 2822 QQP 2824



 Score = 37.7 bits (86), Expect = 0.093
 Identities = 47/183 (25%), Positives = 61/183 (33%), Gaps = 22/183 (12%)

Query: 194  QPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPH 253
            QP P  +   +    P   M    P  PP   ++  PGP   P   P  G  P     P 
Sbjct: 1035 QPTPGPVPQVL----PASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPL 1090

Query: 254  GMGGPNMPPPGPS----GVPPG----MPGQPPGG----PPKPWPEGPMANAAAPTSTPQK 301
            G+      PP P+      PP      P  PPG      P   P G     AA T+T   
Sbjct: 1091 GVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTT 1150

Query: 302  LIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGL 361
                  T  P+P P       SP M  +  S G+      +  L Q+     P+    G 
Sbjct: 1151 TATATTTAVPAPTPAPQRLILSPDMQARLPS-GEVVSIGQLASLAQR-----PVANAGGS 1204

Query: 362  DPV 364
             P+
Sbjct: 1205 KPL 1207



 Score = 36.6 bits (83), Expect = 0.21
 Identities = 36/137 (26%), Positives = 51/137 (37%), Gaps = 9/137 (6%)

Query: 236  PGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAP 295
            P P P P P     +R   M  P     G + V    P  P G  P   P GP  +A   
Sbjct: 981  PDPPPRPKPVKMKVNR---MLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPT 1037

Query: 296  TSTPQKLIPPQPTGRPSPAPPAVPPAASP----VMPPQTQSPGQPAQ--PAPMVPLHQKQ 349
                 +++P       SPA P + PA+ P    ++PP   + G   Q  P+P+  L    
Sbjct: 1038 PGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTS 1097

Query: 350  SRITPIQKPRGLDPVEI 366
               TP    +   P  +
Sbjct: 1098 RPPTPTLSLKPTPPAPV 1114



 Score = 34.3 bits (77), Expect = 1.0
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 6/85 (7%)

Query: 1267 GSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRRE 1326
            GS+S A + PPPA    D +     +EDE  DDE   ++  + E       R +++  R 
Sbjct: 267  GSSSAASSPPPPASRLDDEDGDFQPQEDEEEDDEETIEVEEQQEGNDAEAQRREIELLRR 326

Query: 1327 EARNPKRK------PRLMEEDELPS 1345
            E   P  +      P+L+E    PS
Sbjct: 327  EGELPLEELLRSLPPQLLEGPSSPS 351


>gi|38708321 INO80 complex homolog 1 [Homo sapiens]
          Length = 1556

 Score =  259 bits (662), Expect = 1e-68
 Identities = 191/657 (29%), Positives = 326/657 (49%), Gaps = 77/657 (11%)

Query: 437  KAYKRSKRQSLREARITEKLEKQQKIEQERK-RRQKHQEYLNSILQH---AKDFKEYHRS 492
            K +K  K+   +  ++ +K  + +++  E   RR  HQ  + +   H       K+ H S
Sbjct: 210  KKFKEEKKLKAKLKKVKKKRRRDEELSSEESPRRHHHQTKVFAKFSHDAPPPGTKKKHLS 269

Query: 493  VTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ-KKDKRLA 551
            +    Q   +    + +  ++E  K N+  +K   R L   +    RKL  Q  K+ R A
Sbjct: 270  IE---QLNARRRKVWLSIVKKELPKANK--QKASARNLFLTNS---RKLAHQCMKEVRRA 321

Query: 552  YLLQQTD--EYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDET 609
             L  Q +  E +     L ++        EK +K+ +K+AE           +   LDE 
Sbjct: 322  ALQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRKRAEKE-------ALEQRKLDEE 374

Query: 610  SQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEE---- 665
             + +    + ++     ++T T+                + ++ + D    G +EE    
Sbjct: 375  MREAKRQQRKLNF----LITQTELY-------------AHFMSRKRDMGHDGIQEEILRK 417

Query: 666  -EEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV------SEVDARHIIENAKQDVDDEY 718
             E+   + Q        + + ++    D DS+        +  +A HI +   +  D++ 
Sbjct: 418  LEDSSTQRQIDIGGGVVVNITQE----DYDSNHFKAQALKNAENAYHIHQARTRSFDEDA 473

Query: 719  GVSQALA--------RGLQSYYAVAH-AVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769
              S+A A         G    Y++A+ ++    D     + NG LK YQ+KG+ WL +LY
Sbjct: 474  KESRAAALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLY 533

Query: 770  NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829
               +NGILADEMGLGKT+Q+IAL+ +L E + I GPFLII P STL+NW  EF ++ P  
Sbjct: 534  EQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFTRFVPKF 593

Query: 830  VKVSYKGSPAAR---RAFVPQ----LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE 882
              + Y G+P  R   R F  Q     +   F+V++T+Y+ +++D     +++W+YM++DE
Sbjct: 594  KVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDE 653

Query: 883  GHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 942
               +K+      ++L   +    RLLLTGTP+QN + ELWALL+F++PT+F S   F +W
Sbjct: 654  AQALKSSSSVRWKIL-LQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEW 712

Query: 943  FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
            F+       E     +E     + RLH +L+PF+LRR+KK+VE +L +K+E ++ C +++
Sbjct: 713  FSKDIESHAENKSAIDENQ---LSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTS 769

Query: 1003 LQRVLYRHMQAK---GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIE 1056
             Q++LY+ ++ K     LL       ++ +  T +LMN +MQ RK+CNHP +F+  E
Sbjct: 770  RQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFERQE 826



 Score =  155 bits (391), Expect = 4e-37
 Identities = 79/180 (43%), Positives = 118/180 (65%), Gaps = 3/180 (1%)

Query: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
            SGK   LD +L +L++  H+VL++ QMT ++ ++E+Y  YR   Y+RLDG++K  +R  +
Sbjct: 1100 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1159

Query: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
            +  F    ++ F+FLLSTRAGGLG+NL +ADTVI +DSDWNP  D QA DRAHR+GQ  +
Sbjct: 1160 VADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1218

Query: 1199 VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE 1258
            V V RL    ++EE+IL  AK K  + + VI  G F  K  + + +  +  +L+ EE ++
Sbjct: 1219 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLLDDEELEK 1276


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.132    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,094,532
Number of Sequences: 37866
Number of extensions: 5747419
Number of successful extensions: 130082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 2942
Number of HSP's that attempted gapping in prelim test: 38095
Number of HSP's gapped (non-prelim): 46488
length of query: 1647
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1531
effective length of database: 13,855,062
effective search space: 21212099922
effective search space used: 21212099922
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 69 (31.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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