CCDC8 11779

Name: CCDC8	Sequence: fasta or formatted (538aa)		NCBI GI: 199559779
Description: coiled-coil domain containing 8		Referenced in: Additional Brain Proteins Coiled-Coil Proteins Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.3 77 2 C cysteine 0.4 2 1 D aspartate 5.8 31 2 E glutamate 10.2 55 3 F phenylalanine 2.2 12 1 G glycine 7.8 42 2 H histidine 0.9 5 1 I isoleucine 1.5 8 1 K lysine 4.1 22 2 L leucine 4.5 24 2 M methionine 0.9 5 1 N asparagine 3.0 16 1 P proline 7.4 40 3 Q glutamine 7.4 40 2 R arginine 12.5 67 4 S serine 5.4 29 2 T threonine 3.7 20 2 V valine 5.8 31 2 W tryptophan 1.5 8 1 Y tyrosine 0.7 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 8 PNMA1 0.046 paraneoplastic antigen MA1 PNMAL1 0.042 PNMA-like 1 isoform b PNMAL1 0.042 PNMA-like 1 isoform a PNMA3 0.040 paraneoplastic cancer-testis-brain antigen RP1L1 0.032 retinitis pigmentosa 1-like 1 PNMA2 0.031 paraneoplastic antigen MA2 LOC100293596 0.030 PREDICTED: similar to mucin FLG 0.028 filaggrin PNMA5 0.028 paraneoplastic antigen like 5 PNMA5 0.028 paraneoplastic antigen like 5 PNMA5 0.028 paraneoplastic antigen like 5 BASP1 0.026 brain abundant, membrane attached signal protein 1 [... MARCKS 0.025 myristoylated alanine-rich protein kinase C substra... CLIC6 0.024 chloride intracellular channel 6 MDN1 0.023 MDN1, midasin homolog CCDC96 0.023 coiled-coil domain containing 96 ARHGAP30 0.022 Rho GTPase activating protein 30 isoform 1 LOC100288496 0.021 PREDICTED: hypothetical protein XP_002342747 MOAP1 0.021 modulator of apoptosis 1 ZBTB17 0.021 zinc finger and BTB domain containing 17 LOC100134702 0.021 PREDICTED: similar to mucin CHGA 0.021 chromogranin A precursor NOLC1 0.021 nucleolar and coiled-body phosphoprotein 1 DIDO1 0.019 death inducer-obliterator 1 isoform c YTHDC1 0.019 splicing factor YT521-B isoform 2 YTHDC1 0.019 splicing factor YT521-B isoform 1 SNRNP70 0.019 U1 small nuclear ribonucleoprotein 70 kDa NEFH 0.019 neurofilament, heavy polypeptide 200kDa TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform e... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.