Search of human proteins with 19923129

Search of human proteins with 19923129

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19923129 interferon alpha/beta receptor 2 isoform b
precursor [Homo sapiens]
         (331 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46488935 interferon alpha/beta receptor 2 isoform b precursor...   672   0.0  
gi|19923129 interferon alpha/beta receptor 2 isoform b precursor...   672   0.0  
gi|46488937 interferon alpha/beta receptor 2 isoform a precursor...   565   e-161
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]      43   3e-04
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]              43   4e-04
gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens]    40   0.004
gi|239754969 PREDICTED: hypothetical protein [Homo sapiens]            37   0.024
gi|239749517 PREDICTED: hypothetical protein [Homo sapiens]            37   0.024
gi|239743656 PREDICTED: hypothetical protein XP_002342923 [Homo ...    37   0.024
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]      37   0.032
gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]            37   0.032
gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo s...    37   0.032
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]                     36   0.042
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]                     36   0.042
gi|4503641 coagulation factor III precursor [Homo sapiens]             35   0.071
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap...    35   0.093
gi|193794843 BEN domain containing 2 [Homo sapiens]                    34   0.16 
gi|168693643 decay accelerating factor for complement isoform 2 ...    33   0.27 
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ...    33   0.27 
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]                     33   0.27 
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi...    33   0.35 
gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens]    33   0.46 
gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...    32   0.60 
gi|121583542 mitogen-activated protein kinase kinase kinase 15 [...    31   1.7  
gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens]       30   2.3  
gi|21264357 mannan-binding lectin serine protease 1 isoform 1 pr...    30   2.3  
gi|4826643 annexin A3 [Homo sapiens]                                   30   3.0  
gi|149588643 zinc finger protein 283 [Homo sapiens]                    30   3.9  
gi|219842266 usherin isoform B [Homo sapiens]                          29   5.1  
gi|47578099 selenoprotein N, 1 isoform 1 precursor [Homo sapiens]      29   5.1  

>gi|46488935 interferon alpha/beta receptor 2 isoform b precursor
           [Homo sapiens]
          Length = 331

 Score =  672 bits (1734), Expect = 0.0
 Identities = 331/331 (100%), Positives = 331/331 (100%)

Query: 1   MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS 60
           MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS
Sbjct: 1   MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS 60

Query: 61  IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF 120
           IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF
Sbjct: 61  IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF 120

Query: 121 SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK 180
           SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK
Sbjct: 121 SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK 180

Query: 181 HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE 240
           HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE
Sbjct: 181 HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE 240

Query: 241 SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVLRQGLAKGWNAVAIHRCSHNA 300
           SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVLRQGLAKGWNAVAIHRCSHNA
Sbjct: 241 SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVLRQGLAKGWNAVAIHRCSHNA 300

Query: 301 LQSETPELKQSSCLSFPSSWDYKRASLCPSD 331
           LQSETPELKQSSCLSFPSSWDYKRASLCPSD
Sbjct: 301 LQSETPELKQSSCLSFPSSWDYKRASLCPSD 331


>gi|19923129 interferon alpha/beta receptor 2 isoform b precursor
           [Homo sapiens]
          Length = 331

 Score =  672 bits (1734), Expect = 0.0
 Identities = 331/331 (100%), Positives = 331/331 (100%)

Query: 1   MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS 60
           MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS
Sbjct: 1   MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS 60

Query: 61  IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF 120
           IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF
Sbjct: 61  IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF 120

Query: 121 SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK 180
           SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK
Sbjct: 121 SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK 180

Query: 181 HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE 240
           HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE
Sbjct: 181 HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE 240

Query: 241 SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVLRQGLAKGWNAVAIHRCSHNA 300
           SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVLRQGLAKGWNAVAIHRCSHNA
Sbjct: 241 SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVLRQGLAKGWNAVAIHRCSHNA 300

Query: 301 LQSETPELKQSSCLSFPSSWDYKRASLCPSD 331
           LQSETPELKQSSCLSFPSSWDYKRASLCPSD
Sbjct: 301 LQSETPELKQSSCLSFPSSWDYKRASLCPSD 331


>gi|46488937 interferon alpha/beta receptor 2 isoform a precursor
           [Homo sapiens]
          Length = 515

 Score =  565 bits (1455), Expect = e-161
 Identities = 280/280 (100%), Positives = 280/280 (100%)

Query: 1   MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS 60
           MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS
Sbjct: 1   MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS 60

Query: 61  IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF 120
           IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF
Sbjct: 61  IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF 120

Query: 121 SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK 180
           SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK
Sbjct: 121 SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK 180

Query: 181 HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE 240
           HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE
Sbjct: 181 HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESESAE 240

Query: 241 SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVL 280
           SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVL
Sbjct: 241 SAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVL 280


>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
          Length = 819

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 6/93 (6%)

Query: 231 PPGQESESAESAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVLRQGLAKGWNA 290
           P G +     +  + GI+ + L  L++   ++ +        R    K  ++ +   W+ 
Sbjct: 724 PTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHD------RREFAKFEKEKMNAKWDT 777

Query: 291 VAIHRCSHNALQSETPELKQSSCLSFPSSWDYK 323
             +  C  ++LQ  T   +Q SCLS PS+WDY+
Sbjct: 778 PGVQWCDISSLQPLTSRFQQFSCLSLPSTWDYR 810


>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
          Length = 553

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 22/238 (9%)

Query: 47  NFRSILSWEL-KNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRS-THE 104
           N +++L W   +    V   YT+ Y I  + + L     C N  R++CDL+ E     H+
Sbjct: 49  NMKNVLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNK-SECRNINRTYCDLSAETSDYEHQ 107

Query: 105 AYVTVLEGFSGNTTLFSCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQF 164
            Y  V   +    + ++ S  F+  ++    PPE  +      I+V++  P   +   + 
Sbjct: 108 YYAKVKAIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPE- 166

Query: 165 DLSLVIEEQSEGIVKKHKPEIKGNMSG--------NFTYIIDKLIPNTNYCVSV-YLEHS 215
           DL + +++    +  K+   +    S         N T ++  L PNT YCV V      
Sbjct: 167 DLPVSMQQIYSNL--KYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPNTLYCVHVESFVPG 224

Query: 216 DEQAVIKSPLKCTLLPPGQESESAESAKIGGIITVFLIALVLTSTIVTLKWIGYICLR 273
             +    S  +C      Q SE    AKI     +F   L ++ T+     +GY   R
Sbjct: 225 PPRRAQPSEKQCARTLKDQSSEF--KAKI-----IFWYVLPVSITVFLFSVMGYSIYR 275


>gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens]
          Length = 231

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 19/199 (9%)

Query: 46  RNFRSILSWE----LKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRS 101
           RNF +IL W+    L  +S V   Y + Y I  + +  K  ++C  T    CDLT E   
Sbjct: 39  RNFHNILQWQPGRALTGNSSV---YFVQYKIYGQRQ-WKNKEDCWGTQELSCDLTSETSD 94

Query: 102 THEAYV-TVLEGFSGNTTLFSCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEE 160
             E Y   V    +G+ + +S +  F    +   +PP   I      + V++  P++   
Sbjct: 95  IQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDPPVMNITQVNGSLLVILHAPNL-PY 153

Query: 161 ELQFDLSLVIEEQSEGIVK------KHKPEIKGNMSGNFTYIIDKLIPNTNYCV--SVYL 212
             Q + ++ IE+  E + +        + E K     +    I+ L P+++YCV   +Y 
Sbjct: 154 RYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQ 213

Query: 213 EHSDEQAVIKSPLKCTLLP 231
              D ++  +S  +C  +P
Sbjct: 214 PMLDRRSQ-RSEERCVEIP 231


>gi|239754969 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 184

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 306 PELKQSSCLSFPSSWDYKRASLCP 329
           P  K+ SCLS PSSWDY+ +  CP
Sbjct: 155 PRFKRFSCLSLPSSWDYRVSLCCP 178


>gi|239749517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 184

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 306 PELKQSSCLSFPSSWDYKRASLCP 329
           P  K+ SCLS PSSWDY+ +  CP
Sbjct: 155 PRFKRFSCLSLPSSWDYRVSLCCP 178


>gi|239743656 PREDICTED: hypothetical protein XP_002342923 [Homo
           sapiens]
          Length = 184

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 306 PELKQSSCLSFPSSWDYKRASLCP 329
           P  K+ SCLS PSSWDY+ +  CP
Sbjct: 155 PRFKRFSCLSLPSSWDYRVSLCCP 178


>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
          Length = 825

 Score = 36.6 bits (83), Expect = 0.032
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 231 PPGQESESAESAKIGGIITVFLIALVLTSTIVTLKWIGYICLRNSLPKVLRQGLAKGWNA 290
           P G +     +  + GI+ + L  L++   ++ +        R    K  ++ +   W+ 
Sbjct: 724 PTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHD------RREFAKFEKEKMNAKWDT 777

Query: 291 V------AIHRCSHNALQSETPELKQSSCLSFPSSWDYK 323
                   +  C  ++LQ  T   +Q SCLS PS+WDY+
Sbjct: 778 SLSVAQPGVQWCDISSLQPLTSRFQQFSCLSLPSTWDYR 816


>gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]
          Length = 574

 Score = 36.6 bits (83), Expect = 0.032
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 2/112 (1%)

Query: 42  KISLRNFRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRS 101
           K    NF +IL+W+        T Y++ Y    +  D    K C   TR  C+LT E  +
Sbjct: 29  KFQSSNFENILTWDSGPEGTPDTVYSIEYKTYGE-RDWVAKKGCQRITRKSCNLTVETGN 87

Query: 102 THEAYVTVLEGFS-GNTTLFSCSHNFWLAIDMSFEPPEFEIVGFTNHINVMV 152
             E Y   +   S G  +    +  F      + +PP+   +     I ++V
Sbjct: 88  LTELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPPDVTCISKVRSIQMIV 139


>gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo
           sapiens]
          Length = 351

 Score = 36.6 bits (83), Expect = 0.032
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 14/88 (15%)

Query: 131 DMSFEPPEFEIV--GFTNHINVMVKFPSIVEEEL-QFDLSLVIEEQSEGIVKKHKPEIKG 187
           D+  EPPE EI+     +HI ++ +  S++EE+L +F L+L           KH  E   
Sbjct: 232 DLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLAL-----------KHYVESAS 280

Query: 188 NMSGNFTYIIDKLIPNTNYCVSVYLEHS 215
           + SG     I KL   + Y +  + E+S
Sbjct: 281 SQSGCLRISIQKLSNESRYMIYEFWENS 308


>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 36.2 bits (82), Expect = 0.042
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 299 NALQSETPELKQSSCLSFPSSWDYKRASLCPSD 331
           ++LQ   P  K+ SCLS PSSWDY  A   P++
Sbjct: 317 DSLQPLPPGFKRFSCLSLPSSWDYSHAPSRPAN 349


>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 36.2 bits (82), Expect = 0.042
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 299 NALQSETPELKQSSCLSFPSSWDYKRASLCPSD 331
           ++LQ   P  K+ SCLS PSSWDY  A   P++
Sbjct: 317 DSLQPLPPGFKRFSCLSLPSSWDYSHAPSRPAN 349


>gi|4503641 coagulation factor III precursor [Homo sapiens]
          Length = 295

 Score = 35.4 bits (80), Expect = 0.071
 Identities = 67/271 (24%), Positives = 100/271 (36%), Gaps = 63/271 (23%)

Query: 47  NFRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDE-WRSTHEA 105
           NF++IL WE K     P +      I +K  D K    C  TT + CDLTDE  +   + 
Sbjct: 50  NFKTILEWEPK-----PVNQVYTVQISTKSGDWK--SKCFYTTDTECDLTDEIVKDVKQT 102

Query: 106 YVTVLEGF---------SGNTTLFSCSHNFWLAIDMSFEPP---EFEIVGFTNHI----- 148
           Y+  +  +         S    L+  S  F   ++ +   P    FE VG   ++     
Sbjct: 103 YLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDE 162

Query: 149 -------NVMVKFPSIVEEELQFDLSLVIEEQSEGIVKKHKPEIKGNMSGNFTYIIDKLI 201
                  N  +    +  ++L + L    +  S G     K   K N +  F   +DK  
Sbjct: 163 RTLVRRNNTFLSLRDVFGKDLIYTL-YYWKSSSSG-----KKTAKTN-TNEFLIDVDK-- 213

Query: 202 PNTNYCVSVYL---EHSDEQAVIKSPLKCTLLPPGQE-SESAESAKIGGIITVFLIALVL 257
              NYC SV       +  +    SP++C     GQE  E  E   I G +   +I LV 
Sbjct: 214 -GENYCFSVQAVIPSRTVNRKSTDSPVECM----GQEKGEFREIFYIIGAVVFVVIILV- 267

Query: 258 TSTIVTLKWIGYICLRNSLPKVLRQGLAKGW 288
                       I L  SL K  + G+ + W
Sbjct: 268 ------------IILAISLHKCRKAGVGQSW 286


>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
          Length = 1079

 Score = 35.0 bits (79), Expect = 0.093
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 296  CSHNALQSETPELKQSSCLSFPSSWDYKRASLCPSD 331
            C  ++LQ   P  K+ S LS P+SW+Y+    CP++
Sbjct: 1001 CDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTN 1036


>gi|193794843 BEN domain containing 2 [Homo sapiens]
          Length = 799

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 298 HNALQSETPELKQSSCLSFPSSWDYKRASLCP 329
           H++LQ +   LKQ   LS PSSWD +R   CP
Sbjct: 94  HSSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125


>gi|168693643 decay accelerating factor for complement isoform 2
           precursor [Homo sapiens]
          Length = 440

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 296 CSHNALQSETPELKQSSCLSFPSSWDYK 323
           C  ++LQS TP  K+S   S PSSW Y+
Sbjct: 373 CDRSSLQSRTPGFKRSFHFSLPSSWYYR 400


>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
           sapiens]
          Length = 402

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 299 NALQSETPELKQSSCLSFPSSWDYKRASLCPSD 331
           ++LQ   P  K+ SCLS PSSW Y  A   P++
Sbjct: 317 DSLQPLPPGFKRFSCLSLPSSWGYSHAPSRPAN 349


>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 299 NALQSETPELKQSSCLSFPSSWDYKRASLCPSD 331
           ++LQ   P  K+ SCLS PSSW Y  A   P++
Sbjct: 317 DSLQPLPPGFKRFSCLSLPSSWGYSHAPSRPAN 349


>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
           sapiens]
          Length = 440

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 14/24 (58%), Positives = 16/24 (66%)

Query: 300 ALQSETPELKQSSCLSFPSSWDYK 323
           +LQ   P  KQ SCL  PSSWDY+
Sbjct: 373 SLQPLPPGFKQFSCLILPSSWDYR 396


>gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens]
          Length = 263

 Score = 32.7 bits (73), Expect = 0.46
 Identities = 46/227 (20%), Positives = 85/227 (37%), Gaps = 43/227 (18%)

Query: 46  RNFRSILSWE-----LKNHSIVPTHYTLLYTIMSKPEDLKVV------------------ 82
           RNF +IL W+       N S+    Y ++++   K    K                    
Sbjct: 39  RNFHNILQWQPGRALTGNSSVYFVQYKIMFSCSMKSSHQKPSGCWQHISCNFPGCRTLAK 98

Query: 83  ---------KNCANTTRSFCDLTDEWRSTHEAYV-TVLEGFSGNTTLFSCSHNFWLAIDM 132
                    ++C  T    CDLT E     E Y   V    +G+ + +S +  F    + 
Sbjct: 99  YGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWET 158

Query: 133 SFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVK------KHKPEIK 186
             +PP   I      + V++  P++     Q + ++ IE+  E + +        + E K
Sbjct: 159 KIDPPVMNITQVNGSLLVILHAPNL-PYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQK 217

Query: 187 GNMSGNFTYIIDKLIPNTNYCV--SVYLEHSDEQAVIKSPLKCTLLP 231
                +    I+ L P+++YCV   +Y    D ++  +S  +C  +P
Sbjct: 218 VYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQ-RSEERCVEIP 263


>gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA
           synthase isoform 3 [Homo sapiens]
          Length = 500

 Score = 32.3 bits (72), Expect = 0.60
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 300 ALQSETPELKQSSCLSFPSSWDYKR 324
           +LQ   P     +CLS PSSWDY+R
Sbjct: 8   SLQPPPPGFTPFACLSLPSSWDYRR 32


>gi|121583542 mitogen-activated protein kinase kinase kinase 15
           [Homo sapiens]
          Length = 788

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 300 ALQSETPELKQSSCLSFPSSWDY 322
           +LQ   P  K+ SCLS  SSWDY
Sbjct: 35  SLQPLPPRFKRFSCLSLQSSWDY 57


>gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens]
          Length = 557

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 37/166 (22%), Positives = 64/166 (38%), Gaps = 15/166 (9%)

Query: 51  ILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVL 110
           IL W   + S+    ++  Y        +K+   C N T + C+ +    + +E     +
Sbjct: 46  ILRWNRSDESVGNVTFSFDYQKTGMDNWIKL-SGCQNITSTKCNFSSLKLNVYEEIKLRI 104

Query: 111 EGFSGNTTLFSCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVE------EELQF 164
                NT+ +    +F         PPE  +      I + +  P   +      + L F
Sbjct: 105 RAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHIS-PGTKDSVMWALDGLSF 163

Query: 165 DLSLVIEEQSEGIVKKHKPEIKGNMSGNFTYIIDKLIPNTNYCVSV 210
             SLVI + S G+ ++    I+   S +  Y   KL P T YC+ V
Sbjct: 164 TYSLVIWKNSSGVEER----IENIYSRHKIY---KLSPETTYCLKV 202


>gi|21264357 mannan-binding lectin serine protease 1 isoform 1
           precursor [Homo sapiens]
          Length = 699

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 263 TLKWIGYICLRNSLPKVLRQGLAKGWNAVAIHRCSHNALQSETPELKQSSCLS 315
           T  WI  +   N  P      L   W   A H C H +L  E P L+ S  LS
Sbjct: 459 TTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAH-CLHQSLDPEDPTLRDSDLLS 510


>gi|4826643 annexin A3 [Homo sapiens]
          Length = 323

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 13/46 (28%), Positives = 27/46 (58%)

Query: 156 SIVEEELQFDLSLVIEEQSEGIVKKHKPEIKGNMSGNFTYIIDKLI 201
           SI+ E       L+++E      K+ K ++KG++SG+F +++  L+
Sbjct: 43  SILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALV 88


>gi|149588643 zinc finger protein 283 [Homo sapiens]
          Length = 679

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 296 CSHNALQSETPELKQSSCLSFPSSWDY 322
           C   +LQ+  P     SCLS  SSWDY
Sbjct: 14  CDLGSLQAPPPGFTLFSCLSLLSSWDY 40


>gi|219842266 usherin isoform B [Homo sapiens]
          Length = 5202

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 192  NFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPG 233
            N   +ID L+P TNY V V + +S + ++I  P+    +PPG
Sbjct: 2394 NLWVLIDGLVPFTNYTVQVNISNS-QGSLITDPITIA-MPPG 2433


>gi|47578099 selenoprotein N, 1 isoform 1 precursor [Homo sapiens]
          Length = 590

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 296 CSHNALQSETPELKQSSCLS 315
           CSH++LQ + P L  SSCLS
Sbjct: 113 CSHSSLQPQLPWLNUSSCLS 132


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,716,522
Number of Sequences: 37866
Number of extensions: 530457
Number of successful extensions: 1180
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1153
Number of HSP's gapped (non-prelim): 35
length of query: 331
length of database: 18,247,518
effective HSP length: 103
effective length of query: 228
effective length of database: 14,347,320
effective search space: 3271188960
effective search space used: 3271188960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.