Guide to the Human Genome
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Name: PHF10 Sequence: fasta or formatted (498aa) NCBI GI: 194328734
Description:

PHD finger protein 10 isoform a

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt prot [496aa] PHD finger protein 10 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         27           4
 C cysteine            3.6         18           2
 D aspartate           6.6         33           2
 E glutamate           8.6         43           3
 F phenylalanine       1.6          8           1
 G glycine             6.8         34           1
 H histidine           1.8          9           2
 I isoleucine          3.6         18           2
 K lysine              8.4         42           2
 L leucine             6.4         32           1
 M methionine          2.6         13           2
 N asparagine          3.2         16           1
 P proline             7.4         37           2
 Q glutamine           5.0         25           3
 R arginine            6.0         30           3
 S serine              9.0         45           3
 T threonine           4.4         22           1
 V valine              3.8         19           1
 W tryptophan          0.6          3           1
 Y tyrosine            4.8         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PHD finger protein 10 isoform a 
PHF10                 0.991   PHD finger protein 10 isoform b 
DPF2                  0.104   D4, zinc and double PHD fingers family 2 
DPF1                  0.098   D4, zinc and double PHD fingers family 1 isoform c ...
DPF1                  0.098   D4, zinc and double PHD fingers family 1 isoform a ...
MYST3                 0.096   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.096   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.096   MYST histone acetyltransferase (monocytic leukemia)...
MYST4                 0.095   MYST histone acetyltransferase (monocytic leukemia)...
DPF1                  0.090   D4, zinc and double PHD fingers family 1 isoform b ...
MLL2                  0.053   myeloid/lymphoid or mixed-lineage leukemia 2 
MLL3                  0.050   myeloid/lymphoid or mixed-lineage leukemia 3 
RSF1                  0.030   remodeling and spacing factor 1 
MLL4                  0.029   myeloid/lymphoid or mixed-lineage leukemia 4 
BRPF3                 0.029   bromodomain and PHD finger containing, 3 
PHRF1                 0.028   PHD and ring finger domains 1 
BAZ1A                 0.027   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.027   bromodomain adjacent to zinc finger domain, 1A isofo...
CHD5                  0.027   chromodomain helicase DNA binding protein 5 
MLL                   0.026   myeloid/lymphoid or mixed-lineage leukemia protein [...
KDM5A                 0.026   retinoblastoma binding protein 2 isoform 1 
KDM5A                 0.026   retinoblastoma binding protein 2 isoform 2 
KDM5B                 0.025   jumonji, AT rich interactive domain 1B 
LOC100133760          0.025   PREDICTED: similar to Jumonji, AT rich interactive ...
BAZ1B                 0.025   bromodomain adjacent to zinc finger domain, 1B [Homo...
BAZ2A                 0.025   bromodomain adjacent to zinc finger domain, 2A [Homo...
PHF14                 0.025   PHD finger protein 14 isoform 2 
PHF14                 0.025   PHD finger protein 14 isoform 1 
BAZ2B                 0.024   bromodomain adjacent to zinc finger domain, 2B [Homo...
BRPF1                 0.024   bromodomain and PHD finger-containing protein 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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