Guide to the Human Genome
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Name: PIK3C2B Sequence: fasta or formatted (1634aa) NCBI GI: 194097347
Description:

phosphoinositide-3-kinase, class 2 beta polypeptide

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         98           2
 C cysteine            2.3         38           3
 D aspartate           6.1         99           2
 E glutamate           5.8         95           4
 F phenylalanine       4.3         71           2
 G glycine             6.1        100           4
 H histidine           2.8         46           1
 I isoleucine          4.2         68           2
 K lysine              5.2         85           2
 L leucine            11.6        190           2
 M methionine          1.8         29           1
 N asparagine          3.7         61           2
 P proline             6.2        101           3
 Q glutamine           4.3         71           2
 R arginine            6.4        105           3
 S serine              7.7        126           3
 T threonine           4.8         79           2
 V valine              5.8         94           2
 W tryptophan          1.5         25           1
 Y tyrosine            3.2         53           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoinositide-3-kinase, class 2 beta polypeptide... 
PIK3C2A               0.392   phosphoinositide-3-kinase, class 2 alpha polypeptid...
PIK3C2G               0.238   phosphoinositide-3-kinase, class 2 gamma polypeptid...
PIK3CA                0.108   phosphoinositide-3-kinase, catalytic, alpha polypept...
PIK3CG                0.105   phosphoinositide-3-kinase, catalytic, gamma polypept...
PIK3CD                0.100   catalytic phosphatidylinositol 3-kinase delta [Homo...
PIK3CB                0.097   catalytic phosphatidylinositol 3-kinase beta 
PIK3C3                0.041   catalytic phosphatidylinositol 3-kinase 3 
PI4KA                 0.032   phosphatidylinositol 4-kinase type 3 alpha isoform 1 ...
PI4KA                 0.032   phosphatidylinositol 4-kinase type 3 alpha isoform ...
PI4KB                 0.027   catalytic phosphatidylinositol 4-kinase beta 
LOC100293141          0.018   PREDICTED: similar to phosphatidylinositol 4-kinase...
RPH3A                 0.017   rabphilin 3A homolog isoform 1 
RPH3A                 0.017   rabphilin 3A homolog isoform 2 
SYT7                  0.017   synaptotagmin VII 
DOC2B                 0.017   double C2-like domains, beta 
ESYT1                 0.017   extended synaptotagmin-like protein 1 
SYTL5                 0.015   synaptotagmin-like 5 isoform 1 
SYTL5                 0.015   synaptotagmin-like 5 isoform 2 
SYTL5                 0.015   synaptotagmin-like 5 isoform 1 
DOC2A                 0.015   double C2-like domains, alpha 
SYTL1                 0.015   synaptotagmin-like 1 
RIMS1                 0.015   regulating synaptic membrane exocytosis 1 
SYT1                  0.014   synaptotagmin I 
SYT1                  0.014   synaptotagmin I 
SYT1                  0.014   synaptotagmin I 
ESYT2                 0.014   family with sequence similarity 62 (C2 domain contai...
SYT2                  0.014   synaptotagmin II 
SYT2                  0.014   synaptotagmin II 
RIMS2                 0.014   regulating synaptic membrane exocytosis 2 isoform a...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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