Guide to the Human Genome
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Name: DNAJC2 Sequence: fasta or formatted (568aa) NCBI GI: 193788632
Description:

DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 2

Referenced in:

Heat-Shock Proteins and Chaperonins
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [621aa] DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         54           2
 C cysteine            1.1          6           1
 D aspartate           5.6         32           2
 E glutamate          12.1         69           4
 F phenylalanine       3.9         22           2
 G glycine             3.3         19           4
 H histidine           1.6          9           2
 I isoleucine          3.3         19           1
 K lysine             13.7         78           2
 L leucine             6.0         34           3
 M methionine          1.8         10           1
 N asparagine          4.9         28           1
 P proline             3.7         21           1
 Q glutamine           4.4         25           2
 R arginine            6.7         38           2
 S serine              5.6         32           3
 T threonine           4.2         24           2
 V valine              4.6         26           2
 W tryptophan          1.8         10           1
 Y tyrosine            2.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform... 
DNAJC2                0.978   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...
DNAJC21               0.069   DnaJ homology subfamily A member 5 isoform 2 
DNAJC21               0.067   DnaJ homology subfamily A member 5 isoform 1 
DNAJC1                0.047   DnaJ (Hsp40) homolog, subfamily C, member 1 
LOC100133599          0.039   PREDICTED: hypothetical protein 
MAP7D1                0.038   MAP7 domain containing 1 
INCENP                0.038   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.038   inner centromere protein antigens 135/155kDa isofor...
TCHH                  0.038   trichohyalin 
MAP7D2                0.037   MAP7 domain containing 2 
LOC440243             0.036   PREDICTED: Putative golgin subfamily A member 6-lik...
BAT2D1                0.036   HBxAg transactivated protein 2 
LOC727832             0.035   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.035   PREDICTED: hypothetical protein LOC645202 
CALD1                 0.034   caldesmon 1 isoform 1 
LOC283767             0.034   golgi autoantigen, golgin subfamily a-like 
GIGYF2                0.034   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.034   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.034   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.034   GRB10 interacting GYF protein 2 isoform b 
LOC100133599          0.034   PREDICTED: hypothetical protein 
LOC283685             0.032   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CALD1                 0.032   caldesmon 1 isoform 5 
CALD1                 0.032   caldesmon 1 isoform 2 
SMC3                  0.032   structural maintenance of chromosomes 3 
LOC100286959          0.031   PREDICTED: hypothetical protein XP_002343921 
WDR87                 0.031   NYD-SP11 protein 
LOC100131202          0.031   PREDICTED: hypothetical protein 
LOC400352             0.031   PREDICTED: similar to Putative golgin subfamily A m...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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